BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,543,556	T→C	Y130Y (TAT→TAC)	rpnA →	recombination‑promoting nuclease RpnA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,543,556	0	T	C	100.0%	375.1 / NA	98	Y130Y (TAT→TAC)	rpnA	recombination‑promoting nuclease RpnA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (59/39); total (59/39)

Only 100 of 106 total aligned reads displayed.

CACCTCAAACAAACTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTATCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGGCGCT  >  NC_000913/3543421‑3543690

cACCTCAAACAAACTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCccctacccct                                                                                                                                    >  1:204350/1‑140 (MQ=255)

  ccTCAAACAAACTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCccctacccctat                                                                                                                                  >  1:1014686/1‑140 (MQ=255)

   cTCAAACAAACTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTAtt                                                                                                                                 >  2:63930/1‑140 (MQ=255)

    tCAAACAAACTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTc                                                                                                                                <  1:15473/140‑1 (MQ=255)

     caaacaaaCTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCg                                                                                                                               <  1:83816/140‑1 (MQ=255)

     caaacaaaCTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCg                                                                                                                               <  2:438588/140‑1 (MQ=255)

     caaacaaaCTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCg                                                                                                                               >  2:48385/1‑140 (MQ=255)

     caaacaaaCTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCg                                                                                                                               <  2:270415/140‑1 (MQ=255)

     caaacaaaCTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCg                                                                                                                               >  2:1089745/1‑140 (MQ=255)

     caaacaaaCTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCg                                                                                                                               <  1:1216861/140‑1 (MQ=255)

     caaacaaaCTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCg                                                                                                                               >  2:1311852/1‑140 (MQ=255)

     caaacaaaCTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCg                                                                                                                               >  2:641809/1‑140 (MQ=255)

      aaacaaacTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGTCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGc                                                                                                                              >  1:1478490/1‑140 (MQ=255)

            acTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGtt                                                                                                                        >  1:1047293/1‑140 (MQ=255)

             cTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTg                                                                                                                       >  2:189144/1‑140 (MQ=255)

               gATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGc                                                                                                                     >  2:893234/1‑140 (MQ=255)

                aTCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGTTGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCt                                                                                                                    >  1:84643/1‑140 (MQ=255)

                aTCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCt                                                                                                                    >  2:655142/1‑140 (MQ=255)

                   gCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGa                                                                                                                 >  1:583207/1‑140 (MQ=255)

                   gCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGa                                                                                                                 <  2:161772/140‑1 (MQ=255)

                    cATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGAt                                                                                                                >  2:1305557/1‑140 (MQ=255)

                           cATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCg                                                                                                         >  2:379665/1‑140 (MQ=255)

                            atgatgCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACTACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGc                                                                                                        <  1:155136/140‑1 (MQ=255)

                            atgatgCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGc                                                                                                        <  2:204350/140‑1 (MQ=255)

                             tgatgCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGcc                                                                                                       <  1:1459000/140‑1 (MQ=255)

                               atgCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGa                                                                                                     >  1:530143/1‑140 (MQ=255)

                                     tACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCaa                                                                                               >  1:1204260/1‑140 (MQ=255)

                                      aCGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCaaa                                                                                              >  1:966605/1‑140 (MQ=255)

                                          tATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTgg                                                                                          >  1:800537/1‑140 (MQ=255)

                                            ttGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCa                                                                                        >  1:354343/1‑140 (MQ=255)

                                            ttGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCa                                                                                        >  1:361742/1‑140 (MQ=255)

                                            ttGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCa                                                                                        >  1:1074470/1‑140 (MQ=255)

                                               ccGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAgg                                                                                     <  2:1105259/140‑1 (MQ=255)

                                                cGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGc                                                                                    <  2:1483174/140‑1 (MQ=255)

                                                cGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGc                                                                                    <  1:1089745/140‑1 (MQ=255)

                                                 gCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCa                                                                                   >  2:585527/1‑140 (MQ=255)

                                                  cAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAg                                                                                  >  1:962146/1‑140 (MQ=255)

                                                    aTGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCt                                                                                >  2:363792/1‑140 (MQ=255)

                                                    aTGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCt                                                                                <  1:1429662/140‑1 (MQ=255)

                                                      gCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCttt                                                                              <  2:424431/140‑1 (MQ=255)

                                                                cTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGc                                                                    >  2:930620/1‑140 (MQ=255)

                                                                      gCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGTCTCCGCATTTcc                                                              <  2:530143/140‑1 (MQ=255)

                                                                      gCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTcc                                                              >  1:1416319/1‑140 (MQ=255)

                                                                      gCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTcc                                                              >  2:125387/1‑140 (MQ=255)

                                                                      gCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTcc                                                              <  1:641809/140‑1 (MQ=255)

                                                                      gCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTcc                                                              >  1:429281/1‑140 (MQ=255)

                                                                        tGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGc                                                            <  1:63930/140‑1 (MQ=255)

                                                                         ggATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCt                                                           >  2:705086/1‑140 (MQ=255)

                                                                            tACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCtgat                                                        <  2:1204260/140‑1 (MQ=255)

                                                                              cAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCtgattg                                                      >  1:1263892/1‑140 (MQ=255)

                                                                              cAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCtgattg                                                      >  1:37794/1‑140 (MQ=255)

                                                                               aaaaCGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCtgattga                                                     >  2:635044/1‑140 (MQ=255)

                                                                                   cGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTc                                                 <  1:979141/140‑1 (MQ=255)

                                                                                    gTTGTCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCa                                                >  1:288094/1‑140 (MQ=255)

                                                                                    gTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCa                                                >  2:1286852/1‑140 (MQ=255)

                                                                                      tGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCAcc                                              >  2:221895/1‑140 (MQ=255)

                                                                                      tGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCAcc                                              >  1:371590/1‑140 (MQ=255)

                                                                                      tGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCAcc                                              >  2:164905/1‑140 (MQ=255)

                                                                                      tGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCAcc                                              >  2:177228/1‑140 (MQ=255)

                                                                                      tGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCAcc                                              >  2:919851/1‑140 (MQ=255)

                                                                                        ccGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGt                                            <  1:585527/140‑1 (MQ=255)

                                                                                         cGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTc                                           <  2:800537/140‑1 (MQ=255)

                                                                                           aTGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCAt                                         >  2:1500517/1‑140 (MQ=255)

                                                                                              gtggtgCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGcc                                      <  1:189144/140‑1 (MQ=255)

                                                                                               tggtgCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCt                                     <  2:192805/140‑1 (MQ=255)

                                                                                                  tgCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCtgat                                  >  2:1467517/1‑140 (MQ=255)

                                                                                                    ccATTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCtgatga                                <  1:1448784/140‑1 (MQ=255)

                                                                                                      aTTGTTGTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCtgatgatg                              <  1:1305557/140‑1 (MQ=255)

                                                                                                       ttgttgTTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCtgatgatga                             >  1:853056/1‑140 (MQ=255)

                                                                                                        tgttgtTTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGaa                            >  1:1067038/1‑140 (MQ=255)

                                                                                                            gttTTACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCa                        >  1:1334964/1‑140 (MQ=255)

                                                                                                             ttttACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCAt                       <  1:841589/140‑1 (MQ=255)

                                                                                                              tttACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATg                      <  2:1416319/140‑1 (MQ=255)

                                                                                                               ttACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATgc                     >  2:1012315/1‑140 (MQ=255)

                                                                                                                tACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATgca                    <  2:1013750/140‑1 (MQ=255)

                                                                                                                tACCACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATgca                    >  1:840883/1‑140 (MQ=255)

                                                                                                                  ccACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATgcagc                  >  2:1076932/1‑140 (MQ=255)

                                                                                                                  ccACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATgcagc                  >  1:705578/1‑140 (MQ=255)

                                                                                                                   cACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATgcagca                 <  1:919851/140‑1 (MQ=255)

                                                                                                                   cACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATgcagca                 <  2:1478490/140‑1 (MQ=255)

                                                                                                                   cACGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATgcagca                 <  1:379665/140‑1 (MQ=255)

                                                                                                                     cGGTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCAcc               >  2:197027/1‑140 (MQ=255)

                                                                                                                      ggTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCACCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCg              >  1:834426/1‑140 (MQ=255)

                                                                                                                       gTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGa             >  2:1171047/1‑140 (MQ=255)

                                                                                                                       gTATTGAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGa             >  1:1409406/1‑140 (MQ=255)

                                                                                                                            gAAAGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTAt        >  1:1118811/1‑140 (MQ=255)

                                                                                                                              aaGCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATgg      <  1:635044/140‑1 (MQ=255)

                                                                                                                                gCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGgcg    >  2:1306721/1‑140 (MQ=255)

                                                                                                                                gCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGgcg    <  1:705086/140‑1 (MQ=255)

                                                                                                                                gCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGgcg    <  1:597876/140‑1 (MQ=255)

                                                                                                                                gCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGgcg    <  1:177228/140‑1 (MQ=255)

                                                                                                                                gCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGgcg    >  2:701104/1‑140 (MQ=255)

                                                                                                                                gCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGgcg    <  1:1311852/140‑1 (MQ=255)

                                                                                                                                gCCCCTACCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGgcg    >  1:1258231/1‑140 (MQ=255)

                                                                                                                                 cccctacccctaTTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGgcgc   >  2:409907/1‑140 (MQ=255)

                                                                                                                                  ccctacccctatTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGGCgct  >  2:951557/1‑140 (MQ=255)

                                                                                                                                  ccctacccctatTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGGCgct  >  1:1151809/1‑140 (MQ=255)

                                                                                                                                  ccctacccctatTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGGCgct  >  2:895808/1‑140 (MQ=255)

                                                                                                                                  ccctacccctatTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGGCgct  >  1:193122/1‑140 (MQ=255)

                                                                                                                                  ccctacccctatTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGGCgct  >  1:29562/1‑140 (MQ=255)

CACCTCAAACAAACTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTATCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGGCGCT  >  NC_000913/3543421‑3543690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`