BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,777,876	T→C	C160R (TGC→CGC)	lldP →	lactate/glycolate:H(+) symporter LldP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,777,876	0	T	C	100.0%	372.4 / NA	97	C160R (TGC→CGC)	lldP	lactate/glycolate:H(+) symporter LldP
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (40/57); total (40/57)

Only 100 of 102 total aligned reads displayed.

GCGTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGTGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGGGCGGCAGCTACCGTTTATGACCATT  >  NC_000913/3777740‑3778010

gCGTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCTGCCGGGCTGCGcc                                                                                                                                     <  1:382716/140‑1 (MQ=255)

gCGTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGcc                                                                                                                                     <  1:30860/140‑1 (MQ=255)

gCGTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGcc                                                                                                                                     >  1:221259/1‑140 (MQ=255)

gCGTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGcc                                                                                                                                     <  2:1421590/140‑1 (MQ=255)

gCGTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGcc                                                                                                                                     <  2:536901/140‑1 (MQ=255)

 cGTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCt                                                                                                                                    >  1:1389645/1‑140 (MQ=255)

 cGTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCt                                                                                                                                    >  2:331487/1‑140 (MQ=255)

 cGTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCt                                                                                                                                    >  1:640176/1‑140 (MQ=255)

 cGTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCt                                                                                                                                    >  2:775278/1‑140 (MQ=255)

 cGTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCt                                                                                                                                    >  2:1043711/1‑140 (MQ=255)

 cGTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCACCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCt                                                                                                                                    >  2:698679/1‑140 (MQ=255)

  gTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTg                                                                                                                                   <  2:63030/140‑1 (MQ=255)

  gTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTg                                                                                                                                   <  2:637989/140‑1 (MQ=255)

  gTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTg                                                                                                                                   <  2:1062793/140‑1 (MQ=255)

  gTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTg                                                                                                                                   <  1:570018/140‑1 (MQ=255)

  gTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTg                                                                                                                                   <  2:1147471/140‑1 (MQ=255)

  gTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTg                                                                                                                                   <  1:215184/140‑1 (MQ=255)

    cTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGAt                                                                                                                                 <  1:75162/140‑1 (MQ=255)

     tGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGAtt                                                                                                                                >  1:621392/1‑140 (MQ=255)

      gCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTg                                                                                                                               >  1:794876/1‑140 (MQ=255)

      gCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTg                                                                                                                               >  1:296915/1‑140 (MQ=255)

        aaaTGTTGTTGGTCGGTTTCTGTTACGGCGGGTTCTTTGAAGGCGCCGCTGGCTTTGGCGCACCGGTAGAGATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGAGCCTGATTGtt                                                                                                                             <  2:838027/140‑1 (MQ=255)

           tGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAac                                                                                                                          >  2:1478001/1‑140 (MQ=255)

                 tcgtcgGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACcgcg                                                                                                                    <  1:1111316/140‑1 (MQ=255)

                 tcgtcgGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACcgcg                                                                                                                    >  2:156384/1‑140 (MQ=255)

                    tcgGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCa                                                                                                                 >  2:322758/1‑140 (MQ=255)

                    tcgGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCa                                                                                                                 <  1:436953/140‑1 (MQ=255)

                    tcgGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCa                                                                                                                 <  1:857771/140‑1 (MQ=255)

                     cgGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAg                                                                                                                >  1:1354230/1‑140 (MQ=255)

                         ttCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGc                                                                                                            <  1:947521/140‑1 (MQ=255)

                          tCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCa                                                                                                           >  2:1349522/1‑140 (MQ=255)

                          tCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCa                                                                                                           >  2:278740/1‑140 (MQ=255)

                              tttCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTg                                                                                                       <  2:1389645/140‑1 (MQ=255)

                                 cGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTg                                                                                                    >  1:168254/1‑140 (MQ=255)

                                   gcgcGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCg                                                                                                  <  2:1383493/140‑1 (MQ=255)

                                     gcgTTCCTTGAAGGAGCCGCAGGCTTTGGCGCCCCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGAt                                                                                                <  1:899853/140‑1 (MQ=255)

                                      cgTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATg                                                                                               <  1:1401059/140‑1 (MQ=255)

                                        ttCCTTGAAGGAGCCGCGGGCTTTGGCGCCCGGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATggg                                                                                             <  2:1156108/140‑1 (MQ=255)

                                        ttCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATggg                                                                                             <  1:826990/140‑1 (MQ=255)

                                        ttCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATggg                                                                                             <  1:389033/140‑1 (MQ=255)

                                        ttCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATggg                                                                                             <  1:71002/140‑1 (MQ=255)

                                        ttCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATggg                                                                                             <  1:430185/140‑1 (MQ=255)

                                        ttCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATggg                                                                                             <  2:168254/140‑1 (MQ=255)

                                        ttCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGCGCGATggg                                                                                             >  1:5789/1‑140 (MQ=255)

                                           cTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCAt                                                                                          <  2:426864/140‑1 (MQ=255)

                                               aaGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCa                                                                                      <  2:484679/140‑1 (MQ=255)

                                                   aGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATcc                                                                                  >  2:1439982/1‑140 (MQ=255)

                                                   aGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATcc                                                                                  >  2:1240423/1‑140 (MQ=255)

                                                   aGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATcc                                                                                  >  1:980017/1‑140 (MQ=255)

                                                   aGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATcc                                                                                  >  2:647279/1‑140 (MQ=255)

                                                   aGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATcc                                                                                  >  2:875601/1‑140 (MQ=255)

                                                    gCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCt                                                                                 >  2:1112905/1‑140 (MQ=255)

                                                     ccGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTg                                                                                >  2:843502/1‑140 (MQ=255)

                                                     ccGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTg                                                                                >  2:246292/1‑140 (MQ=255)

                                                     ccGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTg                                                                                >  1:419034/1‑140 (MQ=255)

                                                     ccGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTg                                                                                >  2:686965/1‑140 (MQ=255)

                                                     ccGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTg                                                                                >  2:120639/1‑140 (MQ=255)

                                                     ccGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTg                                                                                >  1:571975/1‑140 (MQ=255)

                                                       gCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGt                                                                              <  1:156384/140‑1 (MQ=255)

                                                           gCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGcc                                                                          <  2:221259/140‑1 (MQ=255)

                                                              ttGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGa                                                                       <  2:296122/140‑1 (MQ=255)

                                                              ttGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGa                                                                       <  1:354071/140‑1 (MQ=255)

                                                              ttGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGa                                                                       <  1:278740/140‑1 (MQ=255)

                                                              ttGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGa                                                                       <  2:1436635/140‑1 (MQ=255)

                                                              ttGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGa                                                                       <  1:1162313/140‑1 (MQ=255)

                                                              ttGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGa                                                                       <  1:885641/140‑1 (MQ=255)

                                                              ttGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGa                                                                       <  2:794876/140‑1 (MQ=255)

                                                                ggCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGaca                                                                     <  1:177095/140‑1 (MQ=255)

                                                                   gcACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGacaggt                                                                  <  2:1223037/140‑1 (MQ=255)

                                                                       cGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGCGGCATTTGGTGCGATGGGCATTCCAATCCCGGTTGCCGGacaggcaaca                                                              >  2:345769/1‑140 (MQ=255)

                                                                         gTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGacaggtaacagg                                                            >  2:458369/1‑140 (MQ=255)

                                                                           aGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGacaggtaacaggta                                                          >  2:1094862/1‑140 (MQ=255)

                                                                               aTTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGa                                                      <  1:875601/140‑1 (MQ=255)

                                                                                ttACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGAc                                                     <  1:1162185/140‑1 (MQ=255)

                                                                                ttACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGAc                                                     <  1:1081148/140‑1 (MQ=255)

                                                                                ttACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGAc                                                     <  1:876776/140‑1 (MQ=255)

                                                                                     gccgcATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCtt                                                <  1:955699/140‑1 (MQ=255)

                                                                                      ccgcATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCttt                                               >  1:1038354/1‑140 (MQ=255)

                                                                                       cgcATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGACTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTg                                              >  2:1296712/1‑140 (MQ=255)

                                                                                        gcATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTga                                             <  2:621392/140‑1 (MQ=255)

                                                                                        gcATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTga                                             >  1:844047/1‑140 (MQ=255)

                                                                                          aTTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTgaga                                           <  1:647279/140‑1 (MQ=255)

                                                                                                 gTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCa                                    <  1:1478001/140‑1 (MQ=255)

                                                                                                    ggCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGAt                                 <  1:841277/140‑1 (MQ=255)

                                                                                                    ggCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGAt                                 <  1:133548/140‑1 (MQ=255)

                                                                                                    ggCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGAt                                 <  2:424499/140‑1 (MQ=255)

                                                                                                      ccTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGAtgg                               >  1:1130403/1‑140 (MQ=255)

                                                                                                      ccTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGAtgg                               >  2:363461/1‑140 (MQ=255)

                                                                                                                aaaCCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGGGCGGCa                     <  2:680083/140‑1 (MQ=255)

                                                                                                                aaaCCGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGGGCGGCa                     <  2:114759/140‑1 (MQ=255)

                                                                                                                    cGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGGGCGGCAGCTa                 <  2:419034/140‑1 (MQ=255)

                                                                                                                    cGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGGGCGGCAGCTa                 <  1:1091914/140‑1 (MQ=255)

                                                                                                                    cGCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGGGCGGCAGCTa                 <  1:120639/140‑1 (MQ=255)

                                                                                                                     gCTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGGGCGGCAGCTAc                <  2:640176/140‑1 (MQ=255)

                                                                                                                      cTGTACGCCGCCGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGGGCGGCAGCTAcc               >  2:477479/1‑140 (MQ=255)

                                                                                                                            gccgccGGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGGGCGGCAGCTACCGTTTAt         <  1:331487/140‑1 (MQ=255)

                                                                                                                               gccgGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGGGCGGCAGCTACCGTTTATGAc      <  1:775278/140‑1 (MQ=255)

                                                                                                                                ccgGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGTGCGGCAGCTACCGTTTATGAcc     >  1:1444804/1‑140 (MQ=255)

                                                                                                                                ccgGGCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGGGCGGCAGCTACCGTTTATGAcc     >  1:992112/1‑140 (MQ=255)

                                                                                                                                   ggCTGCGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGGGCGGCAGCTACCGTTTATGACCAtt  >  1:627128/1‑140 (MQ=255)

GCGTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGTGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGGGCGGCAGCTACCGTTTATGACCATT  >  NC_000913/3777740‑3778010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`