BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,254,119	T→C	G32G (GGA→GGG)	yhaJ ←	DNA‑binding transcriptional activator YhaJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,254,119	0	T	C	100.0%	386.2 / NA	103	G32G (GGA→GGG)	yhaJ	DNA‑binding transcriptional activator YhaJ
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (62/41); total (62/41)

Only 100 of 105 total aligned reads displayed.

AACGCGCCCTCGCTCCAACAACATCCTCCCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAA  >  NC_000913/3253987‑3254253

aaCGCGCCCTCGCTCCAACAACATCCTCCCGACATTGGTGAATTAGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCt                                                                                                                                 >  2:463882/1‑140 (MQ=255)

  cgcgCCCTCGCTCCAACAACATCCTCCCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCa                                                                                                                               >  1:958680/1‑140 (MQ=255)

    cgcCCTCGCTCCAACAACATCCTCCCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATc                                                                                                                             >  1:830651/1‑140 (MQ=255)

     gcCCTCGCTCCAACAACATCCTCCCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATcc                                                                                                                            >  2:1291825/1‑140 (MQ=255)

      cccTCGCTCCAACAACATCCTCCCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATccg                                                                                                                           >  1:838292/1‑140 (MQ=255)

       ccTCGCTCCAACAACATCCTCCCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATccgc                                                                                                                          >  2:1339710/1‑140 (MQ=255)

               caacaaCATCCTCCCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATccgccgccgccg                                                                                                                  <  2:1443055/140‑1 (MQ=255)

                  caacaTCCTCCCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCaa                                                                                                               <  1:1347552/140‑1 (MQ=255)

                     caTCCTCCCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAAc                                                                                                            >  2:455512/1‑140 (MQ=255)

                       tcctccCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTg                                                                                                          >  2:324988/1‑140 (MQ=255)

                       tcctccCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTg                                                                                                          >  2:393220/1‑140 (MQ=255)

                       tcctccCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTg                                                                                                          >  2:526589/1‑140 (MQ=255)

                         ctccCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGcc                                                                                                        >  2:1002623/1‑140 (MQ=255)

                         ctccCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGcc                                                                                                        >  1:125382/1‑140 (MQ=255)

                          tccCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGccc                                                                                                       >  1:939513/1‑140 (MQ=255)

                          ccccGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGccc                                                                                                       <  1:131735/139‑1 (MQ=255)

                           cccGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGcccc                                                                                                      >  1:786582/1‑140 (MQ=255)

                           cccGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGATCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGcccc                                                                                                      >  1:1306147/1‑140 (MQ=255)

                            ccGACATTGGTGAATTTGGTACGATGGCCCGCGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCg                                                                                                     >  1:851752/1‑140 (MQ=255)

                                 aTTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGcgat                                                                                                <  2:1172436/140‑1 (MQ=255)

                                 aTTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGcgat                                                                                                <  1:410596/140‑1 (MQ=255)

                                     gTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGcgatcgat                                                                                            >  2:1403380/1‑140 (MQ=255)

                                     gTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGcgatcgat                                                                                            <  2:236423/140‑1 (MQ=255)

                                     gTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGcgatcgat                                                                                            <  1:1150257/140‑1 (MQ=255)

                                     gTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGcgatcgac                                                                                            >  2:1382508/1‑139 (MQ=255)

                                       gAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGatcgatcg                                                                                          <  1:1064504/140‑1 (MQ=255)

                                       gAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGatcgatcg                                                                                          <  1:235843/140‑1 (MQ=255)

                                       gAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGatcgatcg                                                                                          <  2:810133/140‑1 (MQ=255)

                                       gAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGatcgatcg                                                                                          <  1:526589/140‑1 (MQ=255)

                                            tGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATcc                                                                                     <  1:282248/140‑1 (MQ=255)

                                              gTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCAt                                                                                   <  2:354714/140‑1 (MQ=255)

                                               tACGATGGCCGGAGCGGTCAAACAGCACCCCATCCAGCTCTTCTTCCGTTTTTTGCATGGTGTAGCTAAGTGCGGAGGGCACGGGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATa                                                                                  <  2:389095/140‑1 (MQ=255)

                                               tACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATa                                                                                  >  1:127663/1‑140 (MQ=255)

                                                  gATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAAcc                                                                               <  1:463882/140‑1 (MQ=255)

                                                       cccGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAg                                                                          <  1:846354/140‑1 (MQ=255)

                                                       cccGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAg                                                                          >  2:59502/1‑140 (MQ=255)

                                                       cccGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAg                                                                          >  2:1000349/1‑140 (MQ=255)

                                                         cGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTg                                                                        >  2:525232/1‑140 (MQ=255)

                                                           aGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCATGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCt                                                                      >  2:1410211/1‑140 (MQ=255)

                                                           aGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCt                                                                      >  1:330557/1‑140 (MQ=255)

                                                           aGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCt                                                                      <  1:988704/140‑1 (MQ=255)

                                                             cGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTc                                                                    >  2:674682/1‑140 (MQ=255)

                                                             cGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTc                                                                    <  2:215525/140‑1 (MQ=255)

                                                                tCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAg                                                                 <  1:393220/140‑1 (MQ=255)

                                                                    aCAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGtt                                                             <  2:854569/140‑1 (MQ=255)

                                                                    aCAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGtt                                                             <  2:1251127/140‑1 (MQ=255)

                                                                    aCAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGtt                                                             <  2:536276/140‑1 (MQ=255)

                                                                     cAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTa                                                            <  1:481905/140‑1 (MQ=255)

                                                                      aGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGTCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTaa                                                           <  2:830651/140‑1 (MQ=255)

                                                                       gCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAAt                                                          <  2:1095953/140‑1 (MQ=255)

                                                                         ccctcaTCCAGCTCTTCTCCCAGTTTTTGCATGGTGTAGCAAAGTGCGGAAGGCACGCGCCCCAGCTCGTCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGc                                                        <  2:904226/136‑1 (MQ=255)

                                                                          ccacATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGcc                                                       >  1:942989/1‑140 (MQ=255)

                                                                          ccacATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGcc                                                       >  1:167524/1‑140 (MQ=255)

                                                                          ccacATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGcc                                                       >  1:451515/1‑140 (MQ=255)

                                                                          ccacATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGcc                                                       >  2:168066/1‑140 (MQ=255)

                                                                           cacaTCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGccc                                                      <  2:786582/140‑1 (MQ=255)

                                                                           cacaCCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGccc                                                      <  2:523075/140‑1 (MQ=255)

                                                                             caTCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTGGTGCTTCCAGCGTTAATGCCctt                                                    >  2:195919/1‑140 (MQ=255)

                                                                             caTCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCctt                                                    >  2:932715/1‑140 (MQ=255)

                                                                             caTCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCctt                                                    >  2:1115564/1‑140 (MQ=255)

                                                                             caTCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCctt                                                    >  1:604204/1‑140 (MQ=255)

                                                                             caTCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCctt                                                    >  1:633062/1‑140 (MQ=255)

                                                                                 cAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCctttctt                                                <  1:1202852/140‑1 (MQ=255)

                                                                                       ttcttcCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCa                                          >  2:1406655/1‑140 (MQ=255)

                                                                                        tcttcCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCAt                                         >  2:839503/1‑140 (MQ=255)

                                                                                            ccAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCg                                     >  1:1384734/1‑140 (MQ=255)

                                                                                              aGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGtt                                   >  1:1209509/1‑140 (MQ=255)

                                                                                              aGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGtt                                   <  1:1403380/140‑1 (MQ=255)

                                                                                              aGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGtt                                   <  1:1382508/140‑1 (MQ=255)

                                                                                              aGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGtt                                   <  1:1049687/140‑1 (MQ=255)

                                                                                                       aTGGTGTAGCTAAGTGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAg                          <  1:1235988/140‑1 (MQ=255)

                                                                                                           tgtAGCTAAGTGGGGAAGGGCCGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGaaa                      <  2:1025211/140‑1 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  2:828783/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  1:231397/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  2:832895/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  2:725479/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  1:1297013/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  1:1363555/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  1:137263/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  1:1158908/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            <  1:1002623/140‑1 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            <  2:451515/140‑1 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  2:1069891/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  1:997851/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  2:195057/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  1:646272/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  2:237905/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  2:332473/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  1:601651/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  2:363753/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  1:591391/1‑140 (MQ=255)

                                                                                                                     tGCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            >  2:1315438/1‑140 (MQ=255)

                                                                                                                     ggCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa            <  2:1392546/139‑1 (MQ=255)

                                                                                                                      gCGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATAc           <  2:1364506/140‑1 (MQ=255)

                                                                                                                       cGGAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATAcc          <  1:1339710/140‑1 (MQ=255)

                                                                                                                        ggAAGGCACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCg         <  1:674682/140‑1 (MQ=255)

                                                                                                                              cACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGa   >  1:67088/1‑140 (MQ=255)

                                                                                                                              cACGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGa   <  1:168066/140‑1 (MQ=255)

                                                                                                                               aCGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGaa  >  2:789100/1‑140 (MQ=255)

                                                                                                                               aCGCGCCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGACCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGaa  >  2:311709/1‑140 (MQ=255)

AACGCGCCCTCGCTCCAACAACATCCTCCCGACATTGGTGAATTTGGTACGATGGCCCGAGCGGTCAAACAGCACCACATCCAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAA  >  NC_000913/3253987‑3254253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`