Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,942,901	(T)8→7	intergenic (+1/+17)	gcvB → / ← ygdI	small regulatory RNA GcvB/DUF903 domain‑containing lipoprotein YgdI

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,942,894	0	T	.	100.0%	399.4 / NA	91	noncoding (199/205 nt)	gcvB	small regulatory RNA GcvB
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (51/40);  total (51/40)

TACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTATCAGTCTGTGGTTTG  >  NC_000913/2942755‑2943029                                                                                                                                            |                                                                                                                                        tACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCt                                                                                                                                         >  1:1510906/1‑140 (MQ=255)   cGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCttt                                                                                                                                       >  1:904811/1‑140 (MQ=255)        gtgATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCttttttta                                                                                                                                  >  1:1261878/1‑139 (MQ=255)               tgtgttgttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCg                                                                                                                          >  1:631471/1‑140 (MQ=255)                gtgttgttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGa                                                                                                                         >  2:101594/1‑140 (MQ=255)                gtgttgttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGa                                                                                                                         >  1:413996/1‑140 (MQ=255)                 tgttgttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGAt                                                                                                                        <  1:991441/140‑1 (MQ=255)                  gttgttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATc                                                                                                                       <  2:1382148/140‑1 (MQ=255)                      ttgtgttTGCAATTGGTCTGCGATTCCGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCCCCGACTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGa                                                                                                                   <  2:221898/140‑1 (MQ=255)                      ttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGa                                                                                                                   <  1:754975/140‑1 (MQ=255)                      ttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGa                                                                                                                   <  1:904399/140‑1 (MQ=255)                      ttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGa                                                                                                                   <  1:580077/140‑1 (MQ=255)                      ttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGa                                                                                                                   <  2:684323/140‑1 (MQ=255)                      ttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGa                                                                                                                   <  2:330059/140‑1 (MQ=255)                          gttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTa                                                                                                               <  1:438380/140‑1 (MQ=255)                          gttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTa                                                                                                               <  1:997750/140‑1 (MQ=255)                          gttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTa                                                                                                               <  1:101594/140‑1 (MQ=255)                           tttGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTAc                                                                                                              >  1:1492511/1‑140 (MQ=255)                           tttGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTAc                                                                                                              >  2:175686/1‑140 (MQ=255)                             tGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTg                                                                                                            >  1:1432868/1‑140 (MQ=255)                              gCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGa                                                                                                           <  2:1371237/140‑1 (MQ=255)                                aaTTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATc                                                                                                         <  2:1428614/140‑1 (MQ=255)                                aaTTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATc                                                                                                         >  1:868841/1‑140 (MQ=255)                                  ttGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCa                                                                                                       >  2:688433/1‑140 (MQ=255)                                    ggTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGt                                                                                                     <  2:1510906/140‑1 (MQ=255)                                     gTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGtt                                                                                                    <  2:74846/140‑1 (MQ=255)                                        tGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGa                                                                                                 <  2:644264/140‑1 (MQ=255)                                          cGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGAcc                                                                                               >  2:1274145/1‑140 (MQ=255)                                          cGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGAcc                                                                                               >  2:900643/1‑140 (MQ=255)                                               cAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCAtctc                                                                                          >  2:937480/1‑140 (MQ=255)                                                  aCCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCttt                                                                                       <  2:1378223/140‑1 (MQ=255)                                                  aCCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCttt                                                                                       <  1:858877/140‑1 (MQ=255)                                                    cATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCa                                                                                     >  1:35752/1‑140 (MQ=255)                                                     aTGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCAc                                                                                    <  1:1309658/140‑1 (MQ=255)                                                      tGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACg                                                                                   <  2:216739/140‑1 (MQ=255)                                                       ggTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGt                                                                                  <  2:217765/140‑1 (MQ=255)                                                       ggTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGt                                                                                  <  2:1432868/140‑1 (MQ=255)                                                       ggTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGt                                                                                  >  1:91919/1‑140 (MQ=255)                                                       ggTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGt                                                                                  >  1:624484/1‑140 (MQ=255)                                                       ggTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGt                                                                                  >  1:474882/1‑140 (MQ=255)                                                         tAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGTGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCa                                                                                <  1:373996/140‑1 (MQ=255)                                                         tAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCa                                                                                >  1:415416/1‑140 (MQ=255)                                                          aGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAg                                                                               <  1:1092355/140‑1 (MQ=255)                                                            cAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTa                                                                             >  2:331645/1‑140 (MQ=255)                                                              aaGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACg                                                                           >  1:1014017/1‑140 (MQ=255)                                                                 cTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGtt                                                                        >  2:1309375/1‑140 (MQ=255)                                                                 cTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGtt                                                                        >  2:910936/1‑140 (MQ=255)                                                                     cTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATc                                                                    >  1:259523/1‑140 (MQ=255)                                                                       tttttCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATctg                                                                  >  1:1125661/1‑140 (MQ=255)                                                                                 ccTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTttgttg                                                        <  2:1125661/140‑1 (MQ=255)                                                                                 ccTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTttgttg                                                        <  2:35752/140‑1 (MQ=255)                                                                                         tttACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGc                                                >  2:1540596/1‑140 (MQ=255)                                                                                         tttACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGc                                                <  1:175686/140‑1 (MQ=255)                                                                                            aCCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTc                                             >  2:1053790/1‑140 (MQ=255)                                                                                            aCCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTc                                             >  1:280084/1‑140 (MQ=255)                                                                                            aCCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTc                                             <  1:331645/140‑1 (MQ=255)                                                                                             cccTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCt                                            >  2:1215072/1‑140 (MQ=255)                                                                                             cccTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCt                                            >  2:860612/1‑140 (MQ=255)                                                                                                 gtctgtcCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTtat                                        >  1:1292235/1‑140 (MQ=255)                                                                                                 gtctgtcCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTtat                                        >  1:1316707/1‑140 (MQ=255)                                                                                                 gtctgtcCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTtat                                        >  2:252350/1‑140 (MQ=255)                                                                                                  tctgtcCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTtata                                       <  1:1385204/140‑1 (MQ=255)                                                                                                  tctgtcCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTtata                                       >  1:688101/1‑140 (MQ=255)                                                                                                  tctgtcCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTtata                                       >  1:1340665/1‑140 (MQ=255)                                                                                                    tgtcCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACg                                     >  1:685321/1‑140 (MQ=255)                                                                                                     gtcCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGa                                    <  2:1261878/140‑1 (MQ=255)                                                                                                      tcCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGaa                                   >  1:1394564/1‑140 (MQ=255)                                                                                                          tAGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCa                               <  2:517272/140‑1 (MQ=255)                                                                                                           aGTGATTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCAt                              >  2:893618/1‑140 (MQ=255)                                                                                                               aTTAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCg                          <  1:1393/140‑1 (MQ=255)                                                                                                                ttAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCgg                         >  2:556890/1‑140 (MQ=255)                                                                                                                ttAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCgg                         >  2:767064/1‑140 (MQ=255)                                                                                                                ttAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCgg                         >  2:285991/1‑140 (MQ=255)                                                                                                                ttAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCgg                         >  1:119781/1‑140 (MQ=255)                                                                                                                 tAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGt                        <  1:1329044/140‑1 (MQ=255)                                                                                                                 tAATGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGt                        <  2:868841/140‑1 (MQ=255)                                                                                                                    tGTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATc                     >  2:1264154/1‑140 (MQ=255)                                                                                                                     gTAGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCg                    <  1:603013/140‑1 (MQ=255)                                                                                                                       aGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGtt                  >  2:515822/1‑140 (MQ=255)                                                                                                                       aGCACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGtt                  >  1:413189/1‑140 (MQ=255)                                                                                                                         cACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTAt                <  2:280084/140‑1 (MQ=255)                                                                                                                         cACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTAt                >  2:1308683/1‑140 (MQ=255)                                                                                                                         cACCGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATATGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTAt                >  2:493676/1‑140 (MQ=255)                                                                                                                          cccGCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTTATCCAGTTCGACCATCCCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTATc               <  1:1416147/139‑1 (MQ=255)                                                                                                                             gCCTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTATCAGt            <  2:247033/140‑1 (MQ=255)                                                                                                                              ccTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTATCAGTc           >  2:966550/1‑140 (MQ=255)                                                                                                                              ccTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTATCAGTc           >  2:954144/1‑140 (MQ=255)                                                                                                                              ccTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTATCAGTc           >  1:994571/1‑140 (MQ=255)                                                                                                                              ccTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTATCAGTc           >  1:804342/1‑140 (MQ=255)                                                                                                                              ccTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTATCAGTc           >  2:195662/1‑140 (MQ=255)                                                                                                                              ccTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTATCAGTc           >  2:84364/1‑140 (MQ=255)                                                                                                                              ccTAATTGCGGTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTATCAGTc           >  2:318471/1‑140 (MQ=255)                                                                                                                                       ggTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTATCAGTCTGTGGTTTg  <  2:1014017/140‑1 (MQ=255)                                                                                                                                       ggTGC‑TTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTATCAGTCTGTGGTTTg  <  2:631471/140‑1 (MQ=255)                                                                                                                                            |                                                                                                                                        TACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTATCAGTCTGTGGTTTG  >  NC_000913/2942755‑2943029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑