Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,029,454	Δ1 bp	coding (516/1191 nt)	rlmI ←	23S rRNA m(5)C1962 methyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,029,451	0	G	.	100.0%	246.6 / NA	57	coding (519/1191 nt)	rlmI	23S rRNA m(5)C1962 methyltransferase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (26/31);  total (26/31)

CAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATTCTGCCCCAGCACT  >  NC_000913/1029312‑1029582                                                                                                                                            |                                                                                                                                    cAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACg                                                                                                                                     <  1:1273778/140‑1 (MQ=255) cAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACg                                                                                                                                     <  2:393778/140‑1 (MQ=255)    cGTAGCGGCGGGGAGCCAGGCGGGTATCACGCTGGTTCAGGGAGTAGCCCGCTTTGTGTCCGTGCTGAATATCCCCCCCCCGTTTCTTTTCGTGTTTTTTTATCTGCAGCAGGGGAGGGGGGAACTCCCCcggggcgggg                                                                                                                                  >  2:411058/1‑140 (MQ=255)      tAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACgggccc                                                                                                                                <  1:561956/140‑4 (MQ=255)           gcggGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGt                                                                                                                          <  2:940469/140‑1 (MQ=255)           gcggGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGt                                                                                                                          <  2:517050/140‑1 (MQ=255)            cggGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTc                                                                                                                         <  2:349542/140‑1 (MQ=255)                       gcggcTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTcc                                                                                                              <  1:1449176/140‑1 (MQ=255)                       gcggcTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTcc                                                                                                              <  1:149540/140‑1 (MQ=255)                          gcTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCcttc                                                                                                           >  2:325468/1‑140 (MQ=255)                           cTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCcttct                                                                                                          <  1:1274339/140‑1 (MQ=255)                                    tGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGt                                                                                                 <  1:660284/140‑1 (MQ=255)                                     ggTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTa                                                                                                <  1:632457/140‑1 (MQ=255)                                     ggTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTa                                                                                                >  1:491123/1‑140 (MQ=255)                                        ccAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACcg                                                                                             >  1:1485057/1‑140 (MQ=255)                                           ggTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGa                                                                                          >  1:505943/1‑140 (MQ=255)                                           ggTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGa                                                                                          <  2:1352050/140‑1 (MQ=255)                                            gtagtaGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGAc                                                                                         >  2:932898/1‑140 (MQ=255)                                                tagCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCg                                                                                     >  1:450460/1‑140 (MQ=255)                                                tagCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCg                                                                                     >  1:454608/1‑140 (MQ=255)                                                tagCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCg                                                                                     >  1:458103/1‑140 (MQ=255)                                                tagCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCg                                                                                     >  2:579055/1‑140 (MQ=255)                                                tagCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCg                                                                                     >  2:1055112/1‑140 (MQ=255)                                                 agCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGc                                                                                    >  1:156062/1‑140 (MQ=255)                                                   cccGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTg                                                                                  <  2:347322/140‑1 (MQ=255)                                                   cccGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTg                                                                                  <  1:441517/140‑1 (MQ=255)                                                   cccGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTg                                                                                  <  1:599468/140‑1 (MQ=255)                                                     cGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCg                                                                                >  1:1150769/1‑140 (MQ=255)                                                     cGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCg                                                                                >  2:887472/1‑140 (MQ=255)                                                     cGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCg                                                                                >  1:1288643/1‑140 (MQ=255)                                                      gTTTTGTGTCCGTGCCGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGa                                                                               >  2:368289/1‑140 (MQ=255)                                                       ttttGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGAt                                                                              >  2:665481/1‑140 (MQ=255)                                                            tgtCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTaa                                                                         >  2:18307/1‑140 (MQ=255)                                                                 gTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGa                                                                    <  1:701942/140‑1 (MQ=255)                                                                  tGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGaa                                                                   >  1:913117/1‑140 (MQ=255)                                                                   gCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAAc                                                                  <  1:411058/140‑1 (MQ=255)                                                                       aaTATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTc                                                              <  2:1143479/140‑1 (MQ=255)                                                                            ccaccaGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGt                                                         <  2:450460/140‑1 (MQ=255)                                                                             caccaGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTa                                                        <  1:270815/140‑1 (MQ=255)                                                                              accaGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTAc                                                       >  1:1340144/1‑140 (MQ=255)                                                                                   cagTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGt                                                  >  2:1547895/1‑140 (MQ=255)                                                                                           ttCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAggg                                          <  2:1426175/140‑1 (MQ=255)                                                                                             ccGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCa                                        <  1:636727/140‑1 (MQ=255)                                                                                             ccGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCa                                        <  1:18307/140‑1 (MQ=255)                                                                                                tgtTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACta                                     >  2:133198/1‑140 (MQ=255)                                                                                                  ttcttcAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACtaat                                   >  1:1409187/1‑140 (MQ=255)                                                                                                    cttcAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGTGTACAGCGTTTGCAGGGCACtaatta                                 <  2:1288643/140‑1 (MQ=255)                                                                                                          tCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCcg                           >  1:257085/1‑140 (MQ=255)                                                                                                          tCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTC‑TTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCcgc                          >  2:582245/1‑140 (MQ=255)                                                                                                            ggCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCcgcg                         <  1:227402/140‑1 (MQ=255)                                                                                                            ggCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCcgcg                         <  1:61507/140‑1 (MQ=255)                                                                                                            ggCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCcgcg                         <  1:665481/140‑1 (MQ=255)                                                                                                            ggCAGCAGGGCAGGTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCcgcg                         <  2:1150769/140‑1 (MQ=255)                                                                                                            ggCAGCAGGGCAGGTAGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCcgcg                         <  1:579055/140‑1 (MQ=255)                                                                                                                gcagggcaggTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCt                     <  2:913117/140‑1 (MQ=255)                                                                                                                  agggcaggTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGa                   <  2:454608/140‑1 (MQ=255)                                                                                                                       aggTGGCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATTc              <  2:1223069/140‑1 (MQ=255)                                                                                                                           ggCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATTCTGcc          >  2:878014/1‑140 (MQ=255)                                                                                                                            gCAACTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATTCTGccc         <  1:1055112/140‑1 (MQ=255)                                                                                                                              aaCTCGCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATTCTGCCCCa       <  2:491123/140‑1 (MQ=255)                                                                                                                                   gCCGGTGAC‑GGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATTCTGCCCCAGCACt  >  2:737290/1‑140 (MQ=255)                                                                                                                                            |                                                                                                                                    CAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTACCGCGACGTCGCTGCGATCGTAAATCGAACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATTCTGCCCCAGCACT  >  NC_000913/1029312‑1029582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑