Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,959,168	(C)6→7	coding (99/747 nt)	cutC ←	protein CutC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,959,162	1	.	C	100.0%	255.9 / NA	70	G35G (GGC→GGG)	cutC	protein CutC
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (29/41);  total (29/41)

CGTGCGCACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAG‑‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGC  >  NC_000913/1959024‑1959296                                                                                                                                            |                                                                                                                                         cGTGCGCACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAG‑‑c                                                                                                                                        <  2:724324/140‑1 (MQ=255)   tGCGCACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAG‑‑ccc                                                                                                                                      >  1:208819/1‑140 (MQ=255)   tGCGCACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAG‑‑ccc                                                                                                                                      >  1:1290026/1‑140 (MQ=255)      gcACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCTCCGCTTTGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAG‑‑cccc‑cc                                                                                                                                  <  1:1358804/140‑1 (MQ=255)      gcACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAG‑‑cccc‑cc                                                                                                                                  <  2:208819/140‑1 (MQ=255)       cacaTCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAG‑‑cccc‑ccc                                                                                                                                 <  1:669679/140‑2 (MQ=255)       cacaTCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAG‑‑cccc‑ccc                                                                                                                                 <  1:1531667/140‑2 (MQ=255)       cacaTCATCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAG‑‑cccc‑ccc                                                                                                                                 <  2:1118211/140‑2 (MQ=255)         caTCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAAACACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAG‑‑cccc‑ccctc                                                                                                                               >  2:681572/1‑137 (MQ=255)           tCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAG‑‑cccc‑ccctctt                                                                                                                             >  1:546245/1‑135 (MQ=255)                 aGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTgggg                                                                                                                        <  1:938374/140‑1 (MQ=255)                 aGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTgggg                                                                                                                        <  1:867562/140‑1 (MQ=255)                  gAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGc                                                                                                                       <  2:1298885/140‑1 (MQ=255)                   aaTGGCGGCAAACTCACCGTCGCTGTAGCAAATATCGCCTCCGCGTGGGTGAATTATCGGATGCACAGGGATCGTCGCCCGCTGGCGCTCGGATTTCAGTACCCCCAACGTCGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCt                                                                                                                      <  2:1292790/140‑1 (MQ=255)                    aTGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTg                                                                                                                     >  1:1040913/1‑140 (MQ=255)                    aTGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTg                                                                                                                     >  1:1176853/1‑140 (MQ=255)                     tGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTgc                                                                                                                    >  2:381260/1‑140 (MQ=255)                     tGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGAAAACACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTgc                                                                                                                    >  2:163697/1‑140 (MQ=255)                      ggcggcAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTgcg                                                                                                                   <  2:1227207/140‑1 (MQ=255)                      ggcggcAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTgcg                                                                                                                   >  1:668783/1‑140 (MQ=255)                      ggcggcAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTgcg                                                                                                                   <  2:218099/140‑1 (MQ=255)                      ggcggcAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTgcg                                                                                                                   <  2:105454/140‑1 (MQ=255)                        cggcAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCa                                                                                                                 <  2:1529204/140‑1 (MQ=255)                        cggcAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCa                                                                                                                 <  1:299125/140‑1 (MQ=255)                        cggcAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCa                                                                                                                 <  1:124543/140‑1 (MQ=255)                        cggcAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCa                                                                                                                 <  2:1051602/140‑1 (MQ=255)                        cggcAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCa                                                                                                                 >  2:1286279/1‑140 (MQ=255)                        cggcAAACTCACCGTCGCTGTAACAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCCCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCCCCTTTGGGGCTGCCCa                                                                                                                 >  2:1068899/1‑140 (MQ=255)                          gcAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATa                                                                                                               >  1:1144390/1‑140 (MQ=255)                            aaaCTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAAt                                                                                                             <  1:950317/140‑1 (MQ=255)                                  aCCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAAct                                                                                                       <  2:1053026/140‑1 (MQ=255)                                      tCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACtctgt                                                                                                   <  2:1264544/140‑1 (MQ=255)                                         cTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACtctgtctg                                                                                                <  1:736634/140‑1 (MQ=255)                                         cTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACtctgtctg                                                                                                <  1:341191/140‑1 (MQ=255)                                         cTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTCGGGGCTGCGCATAATTCAACtctgtctg                                                                                                >  2:554453/1‑140 (MQ=255)                                                    aTCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTtgc                                                                                     >  1:1229696/1‑140 (MQ=255)                                                      caccacCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTtgctg                                                                                   <  1:224598/140‑1 (MQ=255)                                                         caccGCGTGGGCGAATTGTCGGATGCACAGGGATCGTCACCCGCTGGCGCTCGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCCGCGCCGTTTTGCTgcgc                                                                                <  1:199194/140‑1 (MQ=255)                                                         caccGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTgcgc                                                                                <  1:955385/140‑1 (MQ=255)                                                         caccGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTgcgc                                                                                <  1:90932/140‑1 (MQ=255)                                                           ccGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCg                                                                              <  1:268185/140‑1 (MQ=255)                                                             gcgTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGGACGGATTTCAGTACCCCCAACGACGGCGTTAAG‑‑CCCCGCCTCTTCTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGtt                                                                            <  2:260467/140‑1 (MQ=255)                                                             gcgTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGtt                                                                            >  2:1352829/1‑140 (MQ=255)                                                              cgTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTa                                                                           >  1:1092902/1‑140 (MQ=255)                                                              cgTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTa                                                                           >  2:604368/1‑140 (MQ=255)                                                                tGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGt                                                                         <  2:907167/140‑1 (MQ=255)                                                                 gggCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTg                                                                        <  1:1109748/140‑1 (MQ=255)                                                                  ggCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGc                                                                       <  2:734374/140‑1 (MQ=255)                                                                   gCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGca                                                                      <  2:1144390/140‑1 (MQ=255)                                                                                 gCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTa                                                        >  1:1120469/1‑140 (MQ=255)                                                                                  cacaGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAATGCACATTCCATGCTGTaa                                                       >  1:1160706/1‑140 (MQ=255)                                                                                      gggATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGTGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGc                                                   <  1:1286279/140‑1 (MQ=255)                                                                                      gggATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGc                                                   <  1:554453/140‑1 (MQ=255)                                                                                      gggATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGc                                                   <  1:387388/140‑1 (MQ=255)                                                                                       ggATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCa                                                  <  1:681572/140‑1 (MQ=255)                                                                                          tCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAAt                                               >  1:1053247/1‑140 (MQ=255)                                                                                            gTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAAttt                                             >  1:903992/1‑140 (MQ=255)                                                                                            gTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAAttt                                             >  1:1086669/1‑140 (MQ=255)                                                                                             tCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTc                                            <  2:1113828/140‑1 (MQ=255)                                                                                             tCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTc                                            <  2:1176853/140‑1 (MQ=255)                                                                                                cccGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAg                                         <  1:890285/140‑1 (MQ=255)                                                                                                 ccGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAg                                         <  1:1183849/140‑1 (MQ=255)                                                                                                 ccGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGt                                        >  2:1363457/1‑140 (MQ=255)                                                                                                        cgcACGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCa                                 >  1:101720/1‑140 (MQ=255)                                                                                                            cGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCAtttt                             <  2:1092902/140‑1 (MQ=255)                                                                                                            cGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCAtttt                             <  1:429453/140‑1 (MQ=255)                                                                                                            cGGATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCAtttt                             <  1:604368/140‑1 (MQ=255)                                                                                                              gATTTCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTa                           <  1:163697/140‑1 (MQ=255)                                                                                                                 ttCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTc                        >  2:1072256/1‑140 (MQ=255)                                                                                                                 ttCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTc                        <  1:10132/140‑1 (MQ=255)                                                                                                                 ttCAGTACACCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTGTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTc                        >  2:1520654/1‑140 (MQ=255)                                                                                                                        cacCCAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAAtt                 >  2:315123/1‑140 (MQ=255)                                                                                                                           ccAACGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACg              >  1:638797/1‑140 (MQ=255)                                                                                                                             aaCGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGcc            >  1:540099/1‑140 (MQ=255)                                                                                                                             aaCGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGcc            >  2:29703/1‑140 (MQ=255)                                                                                                                             aaCGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGcc            >  2:690515/1‑140 (MQ=255)                                                                                                                             aaCGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGcc            <  2:719461/140‑1 (MQ=255)                                                                                                                             aaCGACGGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGcc            >  2:940033/1‑140 (MQ=255)                                                                                                                                  cgGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTg       >  1:626925/1‑140 (MQ=255)                                                                                                                                  cgGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTg       >  1:250138/1‑140 (MQ=255)                                                                                                                                  cgGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTg       >  1:1507054/1‑140 (MQ=255)                                                                                                                                  cgGCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATACAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTg       <  1:1143753/140‑1 (MQ=255)                                                                                                                                   ggCGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGc      <  2:1053247/140‑1 (MQ=255)                                                                                                                                     cGTTAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGCTTTGCTGCGCCGTTAGTGCCCATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTc    >  2:1176040/1‑140 (MQ=255)                                                                                                                                       ttAAGC‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGc  <  1:381260/140‑1 (MQ=255)                                                                                                                                            |                                                                                                                                         CGTGCGCACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAG‑‑CCCC‑CCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGC  >  NC_000913/1959024‑1959296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑