BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,213,761	0	A	C	24.1%	223.5 / 19.5	87	G121G (GGT→GGG)	yjaB	putative N‑acetyltransferase YjaB
Reads supporting (aligned to +/- strand): ref base A (44/22); new base C (0/21); total (44/43)
Fisher's exact test for biased strand distribution p-value = 1.39e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 104 total aligned reads displayed.

GTCACCATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAGCG  >  NC_000913/4213622‑4213900

gtCACCATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTaaaa                                                                                                                                             >  2:666952/1‑140 (MQ=255)

gtCACCATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTaaaa                                                                                                                                             >  2:1378278/1‑140 (MQ=255)

gtCACCATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTaaaa                                                                                                                                             >  1:188966/1‑140 (MQ=255)

gtCACCATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTaaaa                                                                                                                                             >  1:143487/1‑140 (MQ=255)

 tCACCATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAAc                                                                                                                                            >  2:617929/1‑140 (MQ=255)

 tCACCATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAAc                                                                                                                                            >  1:175318/1‑140 (MQ=255)

  cACCATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAAcc                                                                                                                                           <  2:962277/140‑1 (MQ=255)

   aCCATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAAccc                                                                                                                                          >  2:741526/1‑140 (MQ=255)

    ccATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCa                                                                                                                                         <  1:417747/140‑1 (MQ=255)

    ccATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCa                                                                                                                                         <  2:715032/140‑1 (MQ=255)

    ccATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCa                                                                                                                                         <  1:906818/140‑1 (MQ=255)

    ccATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCa                                                                                                                                         <  2:227758/140‑1 (MQ=255)

    ccATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCa                                                                                                                                         <  1:512381/140‑1 (MQ=255)

    ccATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCa                                                                                                                                         <  1:303438/140‑1 (MQ=255)

    ccATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCa                                                                                                                                         <  2:815615/140‑1 (MQ=255)

    ccATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCa                                                                                                                                         <  2:933362/140‑1 (MQ=255)

    ccATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCa                                                                                                                                         <  1:129546/140‑1 (MQ=255)

         ggtggGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACcttc                                                                                                                                    <  2:422366/140‑1 (MQ=255)

         ggtggGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACcttc                                                                                                                                    >  1:276841/1‑140 (MQ=255)

         ggtggGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACcttc                                                                                                                                    <  1:347767/140‑1 (MQ=255)

          gtggGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACcttct                                                                                                                                   >  1:815655/1‑140 (MQ=255)

          gtggGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACcttct                                                                                                                                   >  1:778286/1‑140 (MQ=255)

           tggGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACcttctt                                                                                                                                  >  1:47387/1‑140 (MQ=255)

             ggTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTtat                                                                                                                                >  2:1482791/1‑140 (MQ=255)

             ggTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTtat                                                                                                                                >  2:122435/1‑140 (MQ=255)

               tACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAg                                                                                                                              <  2:526505/140‑1 (MQ=255)

               tACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAg                                                                                                                              >  1:1233477/1‑140 (MQ=255)

               tACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAg                                                                                                                              >  2:74299/1‑140 (MQ=255)

               tACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAg                                                                                                                              >  1:111518/1‑140 (MQ=255)

               tACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAg                                                                                                                              >  2:457515/1‑140 (MQ=255)

               tACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAg                                                                                                                              >  2:123/1‑140 (MQ=255)

                  tAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAAc                                                                                                                           >  1:165619/1‑140 (MQ=255)

                    aaCCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAAccc                                                                                                                         >  1:471072/1‑140 (MQ=255)

                       cTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTACCCTTAAAACCCCCCTTCTTATAGAACCCAAc                                                                                                                      <  2:47748/140‑1 (MQ=255)

                       cTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAACCGTCCCCCTCAGAGCGCCCCGTACCCTTAAACCCCCCCTTCTTATAGACCCCAAc                                                                                                                      <  2:441375/140‑1 (MQ=38)

                         gAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCg                                                                                                                    >  1:1306153/1‑140 (MQ=255)

                         gAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCg                                                                                                                    >  1:1507519/1‑140 (MQ=255)

                         gAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCg                                                                                                                    >  2:198360/1‑140 (MQ=255)

                          aaGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGc                                                                                                                   >  1:410649/1‑140 (MQ=255)

                              tCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAACCCCACCTTCTTATAGAACCCAACCGCCTGc                                                                                                               <  1:880831/140‑1 (MQ=255)

                                aGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTc                                                                                                             >  1:1176734/1‑140 (MQ=255)

                                   caaCCGGGATGAAAAAAAATCGCCTACGCCCCCACATACGCCAGACTCAGCAACGGATACGGTTTCCCCAAATCGTCCCCCTCAGAGCGTCCCGTAACCTTAAAACCCCCCTTCTTATAGAACCCAACCGCCTGCTCAtt                                                                                                          <  2:1387783/138‑1 (MQ=255)

                                      ccGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTg                                                                                                       <  1:123/140‑1 (MQ=255)

                                                      tCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACgttggtt                                                                                       <  2:188966/140‑1 (MQ=255)

                                                      tCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACgttggtt                                                                                       <  2:143487/140‑1 (MQ=255)

                                                       cGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACgttggttg                                                                                      <  1:617929/140‑1 (MQ=255)

                                                                ccccACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCCCCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCg                                                                             <  2:595428/140‑1 (MQ=255)

                                                                       tccGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCCCCTCAGAGCGTCCCGTAACCTTAAACCCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCAt                                                                      <  2:746949/138‑1 (MQ=255)

                                                                          gCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCga                                                                   >  2:420605/1‑140 (MQ=255)

                                                                          gCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCga                                                                   >  1:1404375/1‑140 (MQ=255)

                                                                          gCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCga                                                                   >  2:529590/1‑140 (MQ=255)

                                                                          gCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCga                                                                   >  2:114888/1‑140 (MQ=255)

                                                                          gCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCga                                                                   >  2:1161118/1‑140 (MQ=255)

                                                                          gCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCga                                                                   >  1:1335514/1‑140 (MQ=255)

                                                                           ccAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCgag                                                                  >  2:1333574/1‑140 (MQ=255)

                                                                                ttCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAgcgc                                                             >  2:1366179/1‑140 (MQ=255)

                                                                                ttCAGCAACGGATACGGTTCCCCCAAATCGTCCCCCTCAGAGCGCCCCGTACCCTTAAACCCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAgcgc                                                             <  2:457328/140‑1 (MQ=255)

                                                                                 tCAGCAACGGATACGGTTTCCCCAAATCGTCCCCCTCAGAGCGTCCCGTACCCTTAAAACCCCCCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCa                                                            <  1:1068248/140‑1 (MQ=255)

                                                                                 tCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTACCCTTAAACCCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCa                                                            <  2:165619/140‑1 (MQ=255)

                                                                                 tCAGCAACGGATACGGTCCCCCCAACCCGACCCCCCGAGAGCGGCCCTTAACCTAAAAACCCGCCTTTTTAGAGACCCCACCCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCa                                                            <  2:473212/140‑1 (MQ=255)

                                                                                   aGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTACCCTTAAACCCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATg                                                          <  2:18666/140‑1 (MQ=255)

                                                                                    gCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGc                                                         >  1:864315/1‑140 (MQ=255)

                                                                                          gATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTccacc                                                   >  1:387027/1‑140 (MQ=255)

                                                                                               ggTTTCCCCAAATCGCCCCCCTCAGAGCGTCCCGTACCCTTAAACCCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCAc                                              <  1:1091446/140‑1 (MQ=255)

                                                                                                gTTCCCCCAAATCGTCCCCCTCAGAGCGTCCCGTAACCTTAAACCCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCAcc                                             <  2:1306153/140‑1 (MQ=255)

                                                                                                 tttggggaaaCCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCAccc                                            >  2:465816/8‑140 (MQ=255)

                                                                                                 tttCCCCAAATCGTCCCCCTCAGAGCGCCCCGTAACCTTAAACCCCACCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCAccc                                            <  1:567550/140‑1 (MQ=255)

                                                                                                     cccAAATCGTCCCCCTCAGAGCGTCCCGTACCCTTAAACCCCACCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGAcc                                        <  2:111518/140‑1 (MQ=255)

                                                                                                               cccccTCAGAGCGTCCCGTACCCTTAAACCCCACCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAg                              <  1:1293150/137‑1 (MQ=255)

                                                                                                                    tCAGAGCGTCCCGTACCCTTAAACCCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                         <  1:1462580/140‑1 (MQ=255)

                                                                                                                    tCAGAGCGTCCCGTACCCTTAAACCCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                         <  2:676211/140‑1 (MQ=255)

                                                                                                                    ccAGGGCGTCCCGTACCCTTAAACCCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                         <  2:1233477/139‑1 (MQ=255)

                                                                                                                    ccAGGGCGCCCCGTACCCTTAAACCCCCCCTTCTTATGGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                         <  1:1378278/139‑1 (MQ=255)

                                                                                                                    ccAGGGCGCCCCGTACCCTTAAACCCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                         <  1:457515/139‑1 (MQ=255)

                                                                                                                    ccAGAGGGCCCCGTAACCTTAAACCCCACCTTCTTATAAAACCCATCCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                         <  1:1482791/139‑1 (MQ=255)

                                                                                                                    ccAGAGCGTCCCGTAACCTTAAACCCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                         <  2:1095118/139‑1 (MQ=255)

                                                                                                                    ccAGAGCGTCCCGTAACCTTAAACCCCCCCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                         <  1:808806/139‑1 (MQ=255)

                                                                                                                    ccAGAGCGCCCCGAAACCTTAACCCCCGCTTTCTTAGAGGACCAAGCCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCcgcg                         <  2:471072/139‑1 (MQ=255)

                                                                                                                        agCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGcaca                     >  2:1286877/1‑140 (MQ=255)

                                                                                                                        agCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGcaca                     >  1:779706/1‑140 (MQ=255)

                                                                                                                            tCCCGTAACCTTAAACCCCCCCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAg                 <  1:154971/140‑1 (MQ=255)

                                                                                                                            tCCCGTAACCTTAAACCCCACCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAg                 <  2:1201952/140‑1 (MQ=255)

                                                                                                                            tCCCGTAACCTTAAACCCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAg                 <  1:198360/140‑1 (MQ=255)

                                                                                                                            tCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAg                 >  2:1180284/1‑140 (MQ=255)

                                                                                                                            ccccGTACCCTTAAACCCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAg                 <  2:778286/139‑1 (MQ=255)

                                                                                                                            ccccGTAACCTTAAACCCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAg                 <  1:154264/139‑1 (MQ=255)

                                                                                                                            ccccGTAACCTTAAACCCCACCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAg                 <  1:666952/139‑1 (MQ=255)

                                                                                                                             cccGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCTCGCACATCAgg                >  2:960977/1‑140 (MQ=255)

                                                                                                                             cccGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAgg                >  2:1092520/1‑140 (MQ=255)

                                                                                                                             cccGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAgg                >  1:749232/1‑140 (MQ=255)

                                                                                                                             cccGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAgg                >  1:362174/1‑140 (MQ=255)

                                                                                                                             cccGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAgg                >  1:1495570/1‑140 (MQ=255)

                                                                                                                             cccGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAgg                >  1:1254903/1‑140 (MQ=255)

                                                                                                                              ccGTAACTTTAAACCCCCCCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGa               <  2:1507519/140‑1 (MQ=255)

                                                                                                                              ccGTAACCTTAAAACCCACCTTCTTATAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGa               <  1:114888/140‑1 (MQ=255)

                                                                                                                                gTAACCTTAAACCCCCCCTTCTTAAAGACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATc             <  1:1532762/140‑1 (MQ=255)

                                                                                                                                       tAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAAc      >  1:67792/1‑140 (MQ=255)

                                                                                                                                         aaaCCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAg    >  2:981121/1‑140 (MQ=255)

                                                                                                                                           aCCCACTTTTTTATCAAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCCGTACCATCGAGAGCGCATGCTCCACCAGCACCCGTCCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAgcg  <  2:1403043/140‑1 (MQ=255)

                                                                                                                                           aCCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAgcg  <  1:465816/140‑1 (MQ=255)

GTCACCATTGGTGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAGCG  >  NC_000913/4213622‑4213900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`