BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,585,922	T→C	S64S (AGT→AGC)	narQ →	sensory histidine kinase NarQ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,585,922	0	T	C	100.0%	423.8 / NA	113	S64S (AGT→AGC)	narQ	sensory histidine kinase NarQ
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (54/59); total (54/59)

Only 100 of 117 total aligned reads displayed.

GTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGTCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGAATGCCAACTGGCTGGAGA  >  NC_000913/2585785‑2586055

gtgCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGccc                                                                                                                                     >  1:1520774/1‑140 (MQ=255)

 tgctgcTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCca                                                                                                                                    >  2:622597/1‑140 (MQ=255)

 tgctgcTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCca                                                                                                                                    <  1:699950/140‑1 (MQ=255)

 tgctgcTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCca                                                                                                                                    >  2:798228/1‑140 (MQ=255)

 tgctgcTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCca                                                                                                                                    >  2:1374687/1‑140 (MQ=255)

 tgctgcTGTCGATTCTTTCCACGGGCATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGcccc                                                                                                                                    >  2:175804/1‑139 (MQ=255)

   ctgctgTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCcaca                                                                                                                                  >  1:691973/1‑140 (MQ=255)

   ctgctgTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCcaca                                                                                                                                  >  1:1078963/1‑140 (MQ=255)

    tgctgTCGATTCATTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACaa                                                                                                                                 <  2:1087478/140‑1 (MQ=255)

     gctgTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAAc                                                                                                                                <  1:1302750/140‑1 (MQ=255)

       tgTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTc                                                                                                                              <  2:740637/140‑1 (MQ=255)

        gTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCa                                                                                                                             <  2:1361389/140‑1 (MQ=255)

           gATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAAta                                                                                                                          >  1:372132/1‑139 (MQ=255)

           gATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATg                                                                                                                          >  2:1161767/1‑140 (MQ=255)

           gATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATg                                                                                                                          >  2:719702/1‑140 (MQ=255)

                           aTCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTAtt                                                                                                          <  1:821867/140‑1 (MQ=255)

                               ctctGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTcag                                                                                                      <  2:14325/140‑1 (MQ=255)

                               ctctGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTcag                                                                                                      <  1:1046781/140‑1 (MQ=255)

                                tctGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTcagc                                                                                                     <  2:730366/140‑1 (MQ=255)

                                 ctGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTcagca                                                                                                    <  1:962667/140‑1 (MQ=255)

                                   gCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAgg                                                                                                  >  1:928814/1‑140 (MQ=255)

                                     tAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCa                                                                                                <  2:623571/140‑1 (MQ=255)

                                     tAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCa                                                                                                <  1:538082/140‑1 (MQ=255)

                                          ctGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCa                                                                                           <  1:964578/140‑1 (MQ=255)

                                          ctGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCa                                                                                           <  2:603324/140‑1 (MQ=255)

                                          ctGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCa                                                                                           <  1:1281382/140‑1 (MQ=255)

                                            ggCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCAtt                                                                                         >  1:1059299/1‑140 (MQ=255)

                                            ggCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCAtt                                                                                         >  1:1200392/1‑140 (MQ=255)

                                              cGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCa                                                                                       >  2:981557/1‑140 (MQ=255)

                                              cGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCa                                                                                       >  2:1461196/1‑140 (MQ=255)

                                               gAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCAc                                                                                      <  1:322301/140‑1 (MQ=255)

                                               gAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCAc                                                                                      <  2:1505285/140‑1 (MQ=255)

                                               gAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCAc                                                                                      <  2:1509815/140‑1 (MQ=255)

                                               gAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCAc                                                                                      <  2:253986/140‑1 (MQ=255)

                                               gAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCAc                                                                                      <  1:798228/140‑1 (MQ=255)

                                                   aGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGt                                                                                  <  1:1214063/140‑1 (MQ=255)

                                                   aGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGt                                                                                  >  1:995183/1‑140 (MQ=255)

                                                   aGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTAACCGGt                                                                                  >  2:673910/1‑140 (MQ=255)

                                                       tGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTa                                                                              >  1:1257470/1‑140 (MQ=255)

                                                         cgcgACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTaac                                                                            <  1:214172/140‑1 (MQ=255)

                                                          gcgACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTaacc                                                                           <  1:719702/140‑1 (MQ=255)

                                                          gcgACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTaacc                                                                           <  1:1161767/140‑1 (MQ=255)

                                                                cTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTc                                                                     <  2:691973/140‑1 (MQ=255)

                                                                cTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTc                                                                     <  1:1461196/140‑1 (MQ=255)

                                                                 tGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCa                                                                    <  1:1374687/140‑1 (MQ=255)

                                                                 tGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCa                                                                    <  2:928814/140‑1 (MQ=255)

                                                                 tGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCa                                                                    <  1:1099854/140‑1 (MQ=255)

                                                                 tGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATACACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCa                                                                    <  2:372132/140‑1 (MQ=255)

                                                                  gAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCGACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCaa                                                                   <  1:175804/140‑1 (MQ=255)

                                                                   aGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAAc                                                                  >  2:1177080/1‑140 (MQ=255)

                                                                      cTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTc                                                               <  2:1059299/140‑1 (MQ=255)

                                                                        aTCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTg                                                             >  1:969506/1‑140 (MQ=255)

                                                                        aTCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTg                                                             >  2:378389/1‑140 (MQ=255)

                                                                        aTCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAACAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTg                                                             >  1:1384341/1‑140 (MQ=255)

                                                                        aTCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGAGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTg                                                             >  1:1332671/1‑140 (MQ=255)

                                                                         tCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTgg                                                            >  1:1383880/1‑140 (MQ=255)

                                                                          cAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGt                                                           <  2:1194110/140‑1 (MQ=255)

                                                                           aaTATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTa                                                          <  2:182755/140‑1 (MQ=255)

                                                                             tatTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTAtg                                                        >  1:959182/1‑140 (MQ=255)

                                                                               ttGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTAtgtg                                                      >  1:239442/1‑140 (MQ=255)

                                                                                  ccGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCa                                                   >  2:879300/1‑140 (MQ=255)

                                                                                       tCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGc                                              <  1:1485666/140‑1 (MQ=255)

                                                                                       tCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTAAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGc                                              >  2:1145955/1‑140 (MQ=255)

                                                                                         gCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAg                                            <  1:838356/140‑1 (MQ=255)

                                                                                         gCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAg                                            >  1:1324768/1‑140 (MQ=255)

                                                                                          cTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGt                                           <  2:637823/140‑1 (MQ=255)

                                                                                           tGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTa                                          >  2:897684/1‑140 (MQ=255)

                                                                                           tGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTa                                          >  1:311279/1‑140 (MQ=255)

                                                                                           tGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTa                                          >  2:1517800/1‑140 (MQ=255)

                                                                                             cGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTaaa                                        >  1:1534339/1‑140 (MQ=255)

                                                                                                aTGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAAc                                     <  1:349189/140‑1 (MQ=255)

                                                                                                   cAGAGTTGCCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCATCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCg                                  <  1:146842/140‑1 (MQ=255)

                                                                                                   cAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCg                                  <  2:902866/140‑1 (MQ=255)

                                                                                                   cAGAGTTACCACCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCg                                  <  2:1349011/140‑1 (MQ=255)

                                                                                                     gagTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCt                                >  1:876522/1‑140 (MQ=255)

                                                                                                     gagTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCt                                >  1:1299731/1‑140 (MQ=255)

                                                                                                        ttACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATg                             <  2:1457409/140‑1 (MQ=255)

                                                                                                        ttACCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATg                             <  2:1384068/140‑1 (MQ=255)

                                                                                                          aCCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATgcg                           >  1:492506/1‑140 (MQ=255)

                                                                                                          aCCGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATgcg                           >  2:1541454/1‑140 (MQ=255)

                                                                                                           ccGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATgcgc                          >  2:459703/1‑140 (MQ=255)

                                                                                                           ccGCCTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATg                             <  1:803135/137‑1 (MQ=255)

                                                                                                              ccTGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATc                       >  1:90358/1‑140 (MQ=255)

                                                                                                                tGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTg                     >  1:1052234/1‑140 (MQ=255)

                                                                                                                tGGGCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTg                     >  2:1414770/1‑140 (MQ=255)

                                                                                                                tGGGCTACGACTTGCAAAGTCGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTg                     >  2:251812/1‑140 (MQ=255)

                                                                                                                  ggCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGaa                   >  2:438403/1‑140 (MQ=255)

                                                                                                                  ggCTACGACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGCTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGaa                   >  2:439308/1‑140 (MQ=255)

                                                                                                                        gACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGAATGCCaa             <  2:1257470/140‑1 (MQ=255)

                                                                                                                        gACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGAATGCCaa             <  2:1078963/140‑1 (MQ=255)

                                                                                                                        gACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGAATGCCaa             <  2:1071006/140‑1 (MQ=255)

                                                                                                                        gACTTGCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGAATGCCaa             <  1:645678/140‑1 (MQ=255)

                                                                                                                             gCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGAATGCCAActggc        >  2:1505779/1‑140 (MQ=255)

                                                                                                                             gCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGAATGCCAActggc        <  2:1299731/140‑1 (MQ=255)

                                                                                                                             gCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGAATGCCAActggc        <  1:295797/140‑1 (MQ=255)

                                                                                                                             gCAAAGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGAATGCCAActggc        >  1:1330152/1‑140 (MQ=255)

                                                                                                                               aaaGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGAATGCCAActggctg      <  2:646497/140‑1 (MQ=255)

                                                                                                                                 aGTGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCTCCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACGCGCTATGTGCATCTGAATGCCAACTGGCTGga    <  2:1534339/140‑1 (MQ=255)

                                                                                                                                   tGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGAATGCCAACTGGCTGgaga  >  2:551427/1‑140 (MQ=255)

                                                                                                                                   tGGCAGCCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGAATGCCAACTGGCTGgaga  >  2:508613/1‑140 (MQ=255)

GTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGTCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGAATGCCAACTGGCTGGAGA  >  NC_000913/2585785‑2586055

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`