BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,735,510	T→C	T168A (ACT→GCT)	rluD ←	23S rRNA pseudouridine(1911/1915/1917) synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,735,510	0	T	C	100.0%	552.4 / NA	148	T168A (ACT→GCT)	rluD	23S rRNA pseudouridine(1911/1915/1917) synthase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (82/66); total (82/66)

Only 100 of 155 total aligned reads displayed.

ATAGTGAGTCACCGCTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGTAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAATGGGTGGATA  >  NC_000913/2735376‑2735645

aTAGTGAGTCACCGCTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGAGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAAttt                                                                                                                                    >  2:349126/1‑140 (MQ=255)

 tAGTGAGTCACCGCTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTc                                                                                                                                   >  1:1046745/1‑140 (MQ=255)

    tGAGTCACCGCTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACg                                                                                                                                <  2:595167/140‑1 (MQ=255)

      aGTCACCGCTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGcc                                                                                                                              >  2:388720/1‑140 (MQ=255)

      aGTCACCGCTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGcc                                                                                                                              >  1:1089627/1‑140 (MQ=255)

      aGTCACCGCTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGcc                                                                                                                              >  2:306498/1‑140 (MQ=255)

      aGTCACCGCTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGcc                                                                                                                              >  1:64632/1‑140 (MQ=255)

         cACCGCTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGtt                                                                                                                           >  2:563722/1‑140 (MQ=255)

            cGCTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCa                                                                                                                        <  1:502388/140‑1 (MQ=255)

            cGCTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCa                                                                                                                        <  1:475691/140‑1 (MQ=255)

            cGCTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCa                                                                                                                        <  2:1053920/140‑1 (MQ=255)

              cTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCGCGCCGTTGCaaa                                                                                                                      >  2:289365/1‑140 (MQ=255)

              cTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCaaa                                                                                                                      >  2:1386821/1‑140 (MQ=255)

              cTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCaaa                                                                                                                      >  2:183480/1‑140 (MQ=255)

                 gTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGAt                                                                                                                   <  2:1242670/140‑1 (MQ=255)

                 gTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGAt                                                                                                                   <  2:541460/140‑1 (MQ=255)

                     gCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGa                                                                                                               <  2:1410525/140‑1 (MQ=255)

                      cccATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGAc                                                                                                              >  2:1061540/1‑140 (MQ=255)

                           cGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAAc                                                                                                         >  2:311838/1‑140 (MQ=255)

                           cGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAAc                                                                                                         <  1:945200/140‑1 (MQ=255)

                                   ccGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGa                                                                                                 >  1:313446/1‑140 (MQ=255)

                                      ccATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGcc                                                                                              >  1:1273924/1‑140 (MQ=255)

                                         tatGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGa                                                                                           >  2:914597/1‑140 (MQ=255)

                                          atGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGaa                                                                                          <  2:877117/140‑1 (MQ=255)

                                            gggTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACg                                                                                        <  1:824385/140‑1 (MQ=255)

                                              gTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGt                                                                                      >  2:823401/1‑140 (MQ=255)

                                                aCGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGttt                                                                                    <  2:1513933/140‑1 (MQ=255)

                                                 cGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGtttt                                                                                   <  1:21251/140‑1 (MQ=255)

                                                 cGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGtttt                                                                                   >  2:1040965/1‑140 (MQ=255)

                                                 cGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGtttt                                                                                   >  2:840778/1‑140 (MQ=255)

                                                 cGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGtttt                                                                                   <  2:1386894/140‑1 (MQ=255)

                                                 cGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGtttt                                                                                   >  1:1296132/1‑140 (MQ=255)

                                                 cGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGtttt                                                                                   >  2:828696/1‑140 (MQ=255)

                                                 cGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTCCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGtttt                                                                                   >  1:53009/1‑140 (MQ=255)

                                                  gTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGttttt                                                                                  >  2:60646/1‑140 (MQ=255)

                                                   tttGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTg                                                                                 >  2:76264/1‑140 (MQ=255)

                                                   tttGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTg                                                                                 >  2:658664/1‑140 (MQ=255)

                                                   tttGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGAATTGACTAAACGCGTCTGAGCCGGAACGGATTTTg                                                                                 >  2:765590/1‑140 (MQ=255)

                                                   tttGGTCGGGTGGCGACTGATTGGCTCGCCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTg                                                                                 <  1:372409/140‑1 (MQ=255)

                                                    ttGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGc                                                                                >  1:592420/1‑140 (MQ=255)

                                                       gTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCCCCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCcac                                                                             >  1:147058/1‑140 (MQ=255)

                                                       gTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCcac                                                                             >  1:498805/1‑140 (MQ=255)

                                                       gTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCcac                                                                             >  1:237088/1‑140 (MQ=255)

                                                       gTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCcac                                                                             >  1:1056586/1‑140 (MQ=255)

                                                       gTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCcac                                                                             <  2:1089627/140‑1 (MQ=255)

                                                        tCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCcaca                                                                            <  2:6519/140‑1 (MQ=255)

                                                        tCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGAGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCcaca                                                                            <  1:349126/140‑1 (MQ=255)

                                                        tCGGGTGGCGACTGATTGGCTCGACCACCGTGCCACCTGCGGTCATATGACCAATCTGCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCcaca                                                                            >  2:172693/1‑140 (MQ=255)

                                                                 gACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAgg                                                                   <  2:289644/140‑1 (MQ=255)

                                                                  aCTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGc                                                                  >  1:1250145/1‑140 (MQ=255)

                                                                  aCTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGc                                                                  <  2:1040596/140‑1 (MQ=255)

                                                                    tGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCa                                                                <  2:121061/140‑1 (MQ=255)

                                                                    tGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCa                                                                <  2:925614/140‑1 (MQ=255)

                                                                      aTTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAgt                                                              >  1:424375/1‑140 (MQ=255)

                                                                       ttGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCGCGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAgtg                                                             <  1:289365/140‑1 (MQ=255)

                                                                        tGGCTCGTCCGCCGTGCCACCTGCGGTCATATGACCAAACGCCGCCGCTGCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACACCCATCAGGCCAgtgg                                                            <  2:315676/140‑1 (MQ=255)

                                                                        tGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAgtgg                                                            <  1:1386821/140‑1 (MQ=255)

                                                                           cTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGgtgt                                                         <  1:563722/140‑1 (MQ=255)

                                                                             cGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCt                                                       <  1:1230468/140‑1 (MQ=255)

                                                                             cGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCt                                                       >  2:1499484/1‑140 (MQ=255)

                                                                               tCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCttt                                                     >  1:369526/1‑140 (MQ=255)

                                                                                ccACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGGGTCTTTa                                                    >  2:488840/1‑140 (MQ=255)

                                                                                    cGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCa                                                >  1:144414/1‑140 (MQ=255)

                                                                                        ccACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAgacg                                            >  1:839597/1‑140 (MQ=255)

                                                                                                ggTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAgacgatggacga                                    >  2:536769/1‑140 (MQ=255)

                                                                                                 gTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAgacgatggacgat                                   >  2:1053883/1‑140 (MQ=255)

                                                                                                 gTCATATGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAgacgatggacgat                                   >  1:1505623/1‑140 (MQ=255)

                                                                                                     tatGACCAATCGCCGCCGTTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGccc                               <  1:1011944/140‑1 (MQ=255)

                                                                                                       tGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGc                             >  2:817339/1‑140 (MQ=255)

                                                                                                       tGACCAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGc                             <  1:306498/140‑1 (MQ=255)

                                                                                                           cAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCAcgc                         <  2:592420/140‑1 (MQ=255)

                                                                                                           cAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCAcgc                         <  2:1273924/140‑1 (MQ=255)

                                                                                                           cAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCAcgc                         <  1:1469842/140‑1 (MQ=255)

                                                                                                           cAATCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCACAcgc                         <  1:292474/140‑1 (MQ=255)

                                                                                                            aaTCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCAcgcg                        >  1:478062/1‑140 (MQ=255)

                                                                                                            aaTCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCAcgcg                        >  1:911052/1‑140 (MQ=255)

                                                                                                             aTCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCgg                       <  1:1061540/140‑1 (MQ=255)

                                                                                                              tCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGTTGCCCGCACGCGGt                      >  2:1229993/1‑140 (MQ=255)

                                                                                                              tCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGt                      <  2:498805/140‑1 (MQ=255)

                                                                                                              tCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGt                      >  1:792300/1‑140 (MQ=255)

                                                                                                              tCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGt                      <  1:765590/140‑1 (MQ=255)

                                                                                                              tCGCCACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGt                      >  1:1508302/1‑140 (MQ=255)

                                                                                                                 ccACCGCTTCATGCTCACGAGCAATTTCACGCCGTGGCAAAGATTCGACTAAACTCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGCCGATGCCCGCACGCGGTACa                   <  2:1272056/140‑1 (MQ=255)

                                                                                                                 ccACCGCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACa                   <  1:658664/140‑1 (MQ=255)

                                                                                                                      gCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGc              <  2:424375/140‑1 (MQ=255)

                                                                                                                      gCTTCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGc              <  2:728932/140‑1 (MQ=255)

                                                                                                                         tCATACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAAt           <  2:395191/140‑1 (MQ=255)

                                                                                                                           aTACTCAGGAGCAATTTCACGCCGTTGCAGAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAATgg         <  1:985607/140‑1 (MQ=255)

                                                                                                                           aTACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAATgg         <  1:388720/140‑1 (MQ=255)

                                                                                                                           aTACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAATgg         <  1:256630/140‑1 (MQ=255)

                                                                                                                           aTACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAATgg         <  2:144414/140‑1 (MQ=255)

                                                                                                                            tACTCACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAATggg        >  1:1421269/1‑140 (MQ=255)

                                                                                                                                cACGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAATGGGTGGa    <  1:172693/140‑1 (MQ=255)

                                                                                                                                 aCGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAATGGGTGGAt   >  1:174502/1‑140 (MQ=255)

                                                                                                                                 aCGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAATGGGTGGAt   >  1:277214/1‑140 (MQ=255)

                                                                                                                                 aCGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAATGGGTGGAt   >  1:936449/1‑140 (MQ=255)

                                                                                                                                 aCGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAATGGGTGGAt   >  1:1207678/1‑140 (MQ=255)

                                                                                                                                 aCGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAATGGGTGGAt   >  2:228958/1‑140 (MQ=255)

                                                                                                                                  cGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAATGGGTGGATa  >  1:914385/1‑140 (MQ=255)

                                                                                                                                  cGAGCAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAATGGGTGGATa  >  1:412993/1‑140 (MQ=255)

ATAGTGAGTCACCGCTGGTTTGCCCATCGGATGCACCGCCATATGGGTACGTTTGGTCGGGTGGCGACTGATTGGCTCGTCCACCGTGCCACCTGCGGTCATATGACCAATCGCCACCGCTTCATACTCACGAGTAATTTCACGCCGTTGCAAAGATTCGACTAAACGCGTCTGAGCCGGAACGGTTTTTGCCACAACCATCAGGCCAGTGGTGTCTTTATCCAGACGATGGACGATGCCCGCACGCGGTACATCGGCAATGGGTGGATA  >  NC_000913/2735376‑2735645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`