| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,782,804 | A→G | intergenic (‑78/+261) | ypjA ← / ← pinH | adhesin‑like autotransporter YpjA/putative invertase fragment |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,782,804 | 0 | A | G | 99.2% | 452.5 / ‑4.8 | 122 | intergenic (‑78/+261) | ypjA/pinH | adhesin‑like autotransporter YpjA/putative invertase fragment |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (52/69); total (53/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.22e-01 | |||||||||||
Only 100 of 136 total aligned reads displayed.
GGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGG > NC_000913/2782667‑2782938 | ggCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCgcc > 2:366364/1‑140 (MQ=255)ggCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCgcc > 2:1376267/1‑140 (MQ=255)ggCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATA‑GGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCgcca < 2:1403669/140‑1 (MQ=255) cAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCgccag > 1:1394421/1‑140 (MQ=255) cAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCgccag > 1:631153/1‑140 (MQ=255) aGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCgccaga < 2:1004835/140‑1 (MQ=255) gATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCgccagac > 2:541284/1‑140 (MQ=255) atatCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTACAACATCAGCCCACAGGCgccagacc > 2:1009982/1‑140 (MQ=255) atCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCgccagaccag > 2:1529658/1‑140 (MQ=255) tCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAgg > 2:517554/1‑140 (MQ=255) tAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGAt < 1:952529/140‑1 (MQ=255) tAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGAt < 2:1355187/140‑1 (MQ=255) aGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTc < 1:1339410/140‑1 (MQ=255) ggAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCa > 1:859078/1‑140 (MQ=255) gAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCAt < 1:30611/140‑1 (MQ=255) gAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCAt < 1:853898/140‑1 (MQ=255) gAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCAt < 1:868834/140‑1 (MQ=255) gAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCAt > 2:378206/1‑140 (MQ=255) aaaGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATc < 1:598150/140‑1 (MQ=255) aGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAgaga > 1:124935/1‑140 (MQ=255) aGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAgaga > 1:175875/1‑140 (MQ=255) aGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAgaga < 2:1006262/140‑1 (MQ=255) aGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAgaga > 2:1179981/1‑140 (MQ=255) aGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAgaga > 1:627803/1‑140 (MQ=255) aGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAgaga > 1:1449622/1‑140 (MQ=255) aGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAgaga > 2:501592/1‑140 (MQ=255) cggcgACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACa > 2:781740/1‑140 (MQ=255) ggcgACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAg > 2:1361188/1‑140 (MQ=255) cgACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAgcg < 2:130049/140‑1 (MQ=255) cgACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAgcg > 2:1311793/1‑140 (MQ=255) cgACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAgcg > 1:806719/1‑140 (MQ=255) cgACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAgcg < 2:1239160/140‑1 (MQ=255) cgACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAgcg < 1:1224902/140‑1 (MQ=255) aCAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCa < 1:864498/140‑1 (MQ=255) cAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCaa < 1:517554/140‑1 (MQ=255) cAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCaa < 1:1151153/140‑1 (MQ=255) ataataGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAgt < 2:627592/140‑1 (MQ=255) ataataGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAgt < 1:1529451/140‑1 (MQ=255) ataGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTa < 2:1513904/140‑1 (MQ=255) taGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTAt < 2:485504/140‑1 (MQ=255) aCTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTgtgt > 1:808735/1‑140 (MQ=255) aCTGGTCCTGTTCATAAATTTCATACTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTgtgt > 2:1137368/1‑140 (MQ=255) tGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTc > 2:244895/1‑140 (MQ=255) tGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTc > 1:1084757/1‑140 (MQ=255) ggTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCa < 1:858529/140‑1 (MQ=255) gTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCAc > 1:412354/1‑140 (MQ=255) gTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCAc > 1:1503088/1‑140 (MQ=255) gTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCAc > 1:1243933/1‑140 (MQ=255) ccTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCg < 2:646477/140‑1 (MQ=255) ccTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCg < 2:875291/140‑1 (MQ=255) cTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGc < 2:1516347/140‑1 (MQ=255) cTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGc < 2:202632/140‑1 (MQ=255) gTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCtc > 1:878775/1‑140 (MQ=255) ttCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCtca > 1:579860/1‑140 (MQ=255) ttCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCtca > 1:238379/1‑140 (MQ=255) tAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCaa < 2:116515/140‑1 (MQ=255) aTTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGa < 2:1208579/140‑1 (MQ=255) aTCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGAcatca < 1:567437/140‑1 (MQ=255) tCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGAcatcat > 1:1456487/1‑140 (MQ=255) ctctGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTTATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCatga < 2:913138/140‑1 (MQ=255) ctctGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCatga > 2:628205/1‑140 (MQ=255) ctctGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCatga < 1:536941/140‑1 (MQ=255) gTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTACAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAatgat < 1:1009982/140‑1 (MQ=255) aTACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGata > 2:808842/1‑140 (MQ=255) aTACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGata < 1:1179981/140‑1 (MQ=255) aTACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGata < 1:418400/140‑1 (MQ=255) aTACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGata > 2:1457724/1‑140 (MQ=255) aCTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATAtt < 1:1517036/140‑1 (MQ=255) aCTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATAtt < 2:741459/140‑1 (MQ=255) aCTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATAtt < 1:781740/140‑1 (MQ=255) cTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCTCCGCTCATCAAAGACATCATGATGAAATGATGATATTc < 1:745967/140‑1 (MQ=255) gAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCg < 1:491544/140‑1 (MQ=255) aGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGc > 1:1003481/1‑140 (MQ=255) gTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCa > 2:181607/1‑140 (MQ=255) gTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCa > 2:648591/1‑140 (MQ=255) gTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCa > 1:1368013/1‑140 (MQ=255) tAGCGTTTAAGCGACCTTAGCTTTGCTACAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCAt < 1:732920/140‑1 (MQ=255) gCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATaa < 2:303126/140‑1 (MQ=255) cGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAg > 2:659528/1‑140 (MQ=255) tttAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGaa > 2:522631/1‑140 (MQ=255) aCCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCAt > 1:1171564/1‑140 (MQ=255) aCCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCAt > 1:1320469/1‑140 (MQ=255) aCCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCAt < 2:412354/140‑1 (MQ=255) aCCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCAt > 1:353069/1‑140 (MQ=255) aCCTTAGCTTTGCTGCAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCAt < 2:1114926/140‑1 (MQ=255) tgctgcAACATCAGGCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACg < 2:808735/140‑1 (MQ=255) tgctgcAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACg < 1:181607/140‑1 (MQ=255) gctgcAACATCAGCCCACAGGCGCCAGACCAGGTGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGc > 2:1085877/1‑140 (MQ=255) gctgcAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGc > 1:1360735/1‑140 (MQ=255) ctgcAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGTGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCa < 2:1218048/140‑1 (MQ=255) ctgcAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCa < 2:1207626/140‑1 (MQ=255) ctgcAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCa < 2:333385/140‑1 (MQ=255) ctgcAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCa < 1:432634/140‑1 (MQ=255) ctgcAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCa < 1:1376267/140‑1 (MQ=255) ctgcAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCa < 2:1449622/140‑1 (MQ=255) ctgcAACATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCa < 2:859078/140‑1 (MQ=255) aCATCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTgcg < 2:756849/140‑1 (MQ=255) tCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTg < 1:620389/140‑1 (MQ=255) tCAGCCCACAGGCGCCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTg > 1:958607/1‑140 (MQ=255) caGGCGCCAGACCAGGGGGTTCATCCTGAAGAGACAGCGCAAGTGTTTTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGCTATTCCGCATAAGCATGAGGCATTTTTTAAACGCAATGCGATGAAgtcgag > 2:475502/1‑136 (MQ=14) | GGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCTTTGCTGCAACATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGG > NC_000913/2782667‑2782938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |