Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,798,813	A→G	intergenic (‑318/‑351)	stpA ← / → alaE	DNA‑binding transcriptional repressor StpA with RNA chaperone activity/L‑alanine exporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,798,813	0	A	G	100.0%	282.9 / NA	75	intergenic (‑318/‑351)	stpA/alaE	DNA‑binding transcriptional repressor StpA with RNA chaperone activity/L‑alanine exporter
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (28/47);  total (28/47)

TAGATTATTGGTGAACAGAGCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTACATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCT  >  NC_000913/2798681‑2798935                                                                                                                                     |                                                                                                                           tAGATTATTGGTGAACAGAGCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTc                                                                                                                     <  1:689488/140‑1 (MQ=255)  aGATTATTGGTGAACAGAGCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCt                                                                                                                    <  2:929665/140‑1 (MQ=255)    attattGGTGAACAGAGCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTgg                                                                                                                  >  2:849/1‑140 (MQ=255)      tattGGTGAACAGAGCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCa                                                                                                                >  1:1343706/1‑140 (MQ=255)        ttGGTGAACAGAGCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATa                                                                                                              >  1:981463/1‑140 (MQ=255)         tGGTGAACAGAGCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATaa                                                                                                             >  2:909443/1‑140 (MQ=255)               aCAGAGCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATg                                                                                                       <  2:1040744/140‑1 (MQ=255)                   agCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGa                                                                                                   >  1:1423043/1‑140 (MQ=255)                   agCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGa                                                                                                   >  1:888889/1‑140 (MQ=255)                   agCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGa                                                                                                   >  1:1038384/1‑140 (MQ=255)                     cggcgCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGaaa                                                                                                 >  1:109491/1‑140 (MQ=255)                     cggcgCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGaaa                                                                                                 >  2:254105/1‑140 (MQ=255)                     cggcgCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGaaa                                                                                                 >  1:618765/1‑140 (MQ=255)                        cgcTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATg                                                                                              >  2:486321/1‑140 (MQ=255)                        cgcTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATg                                                                                              >  2:724285/1‑140 (MQ=255)                          ctctctGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCCCTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGAc                                                                                            <  2:950952/140‑1 (MQ=255)                          ctctctGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGAc                                                                                            <  1:633217/140‑1 (MQ=255)                          ctctctGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGAc                                                                                            <  2:135615/140‑1 (MQ=255)                          ctctctGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGAc                                                                                            <  2:589138/140‑1 (MQ=255)                          ctctctGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGAc                                                                                            <  1:1059469/140‑1 (MQ=255)                          ctctctGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGAc                                                                                            >  1:210873/1‑140 (MQ=255)                            ctctGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGAccc                                                                                          <  2:955822/140‑1 (MQ=255)                            ctctGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGAccc                                                                                          <  1:431705/140‑1 (MQ=255)                              ctGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAg                                                                                        <  2:527683/140‑1 (MQ=255)                              ctGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAg                                                                                        <  2:383823/140‑1 (MQ=255)                              ctGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAACGACCCAg                                                                                        <  1:1429572/140‑1 (MQ=255)                                gCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGct                                                                                      <  2:868851/140‑1 (MQ=255)                                       aaTTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACtacat                                                                               <  2:833244/140‑1 (MQ=255)                                         ttCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACtacatac                                                                             >  2:679114/1‑140 (MQ=255)                                          tCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACtacataca                                                                            <  1:254105/140‑1 (MQ=255)                                          tCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACtacataca                                                                            <  1:1136234/140‑1 (MQ=255)                                             gCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCg                                                                         <  2:298711/140‑1 (MQ=255)                                              cAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGa                                                                        <  1:909443/140‑1 (MQ=255)                                                aGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAAt                                                                      >  2:1189651/1‑140 (MQ=255)                                                    tGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATtctc                                                                  <  1:1161477/140‑1 (MQ=255)                                                    tGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATtctc                                                                  <  2:210873/140‑1 (MQ=255)                                                      aCAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTa                                                                <  1:849/140‑1 (MQ=255)                                                           aTCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCtt                                                           >  1:726005/1‑140 (MQ=255)                                                           aTCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCtt                                                           <  2:1343706/140‑1 (MQ=255)                                                           aTCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGACATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCtt                                                           >  2:1434594/1‑140 (MQ=255)                                                            tCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTta                                                          <  2:888889/140‑1 (MQ=255)                                                            tCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTta                                                          <  1:604139/140‑1 (MQ=255)                                                               aaGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAg                                                       >  1:49093/1‑140 (MQ=255)                                                                aGTGAATAAAAATGCAATATAACAGATTAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGc                                                      >  2:45193/1‑140 (MQ=255)                                                                 gTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCCCTACGCTTATAGCg                                                     <  1:438315/140‑1 (MQ=255)                                                                         aaaTGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCa                                             <  2:570523/140‑1 (MQ=255)                                                                                   taACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACt                                   <  2:1423043/140‑1 (MQ=255)                                                                                        gAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCAt                              <  2:981463/140‑1 (MQ=255)                                                                                        gAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCAt                              >  1:627874/1‑140 (MQ=255)                                                                                         aaTAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCAtt                             >  1:835446/1‑140 (MQ=255)                                                                                           tAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAg                           >  2:1520137/1‑140 (MQ=255)                                                                                             aaaGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTg                         <  2:1028693/140‑1 (MQ=255)                                                                                             aaaGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTg                         <  1:486321/140‑1 (MQ=255)                                                                                             aaaGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTg                         <  1:724285/140‑1 (MQ=255)                                                                                             aaaGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTg                         <  2:618765/140‑1 (MQ=255)                                                                                             aaaGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTg                         <  1:679114/140‑1 (MQ=255)                                                                                                        ccatcACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGt              <  2:29239/140‑1 (MQ=255)                                                                                                        ccatcACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGt              <  1:1189651/140‑1 (MQ=255)                                                                                                        ccatcACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGt              <  1:227799/140‑1 (MQ=255)                                                                                                        ccatcACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGt              <  1:390551/140‑1 (MQ=255)                                                                                                        ccatcACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGt              <  2:872141/140‑1 (MQ=255)                                                                                                        ccatcACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGt              >  1:607961/1‑140 (MQ=255)                                                                                                        ccatcACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGt              >  2:771046/1‑140 (MQ=255)                                                                                                        ccatcACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGt              >  2:687257/1‑140 (MQ=255)                                                                                                        ccatcACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGt              <  1:687257/140‑1 (MQ=255)                                                                                                        ccatcACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGt              <  2:607961/140‑1 (MQ=255)                                                                                                        ccatcACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGt              <  2:1037297/140‑1 (MQ=255)                                                                                                        ccatcACTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGACATAAAAAATGCTGAAAATGACCCAGCTGCTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCTCCCCCAAACTTTCATTAGTGATATTAAAGGt              <  1:1434594/140‑1 (MQ=255)                                                                                                             aCTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGc         <  2:1038384/140‑1 (MQ=255)                                                                                                              cTGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGcc        <  2:49093/140‑1 (MQ=255)                                                                                                               tGGTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCa       <  2:627874/140‑1 (MQ=255)                                                                                                                ggTGCTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCat      >  1:1361277/1‑140 (MQ=255)                                                                                                                    cTTTCTGCTGTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCt  >  2:1080638/1‑140 (MQ=255)                                                                                                                         tgctgTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGcc        >  2:1004221/1‑129 (MQ=255)                                                                                                                         tgctgTTAATGTGCATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGcc        <  1:1004221/129‑1 (MQ=255)                                                                                                                                     |                                                                                                                           TAGATTATTGGTGAACAGAGCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAATGCAATATAACAGAATAAAAGAAAACATCCATCACTGGTGCTTTCTGCTGTTAATGTACATTGTCTGGCATAAAAAATGCTGAAAATGACCCAGCTACTACATACACCGAATTCTCTACGCTTATAGCGTTACCTCACCCCCAAACTTTCATTAGTGATATTAAAGGTAAGGCCATATCT  >  NC_000913/2798681‑2798935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑