BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	279,935	A→G	intergenic (‑60/+450)	insA‑2 ← / ← yagB	IS1 protein InsA/orphan antitoxin YagB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	279,935	0	A	G	100.0%	388.7 / NA	106	intergenic (‑60/+450)	insA‑2/yagB	IS1 protein InsA/orphan antitoxin YagB
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (46/60); total (46/60)

Only 100 of 106 total aligned reads displayed.

GCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAA  >  NC_000913/279802‑280067

gCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACaaa                                                                                                                                <  1:304239/140‑1 (MQ=18)

 cAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAAt                                                                                                                               >  2:338810/1‑140 (MQ=25)

      cTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAAGAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCt                                                                                                                          >  2:2987/1‑140 (MQ=255)

      cTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCt                                                                                                                          >  1:585349/1‑140 (MQ=255)

      cTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCt                                                                                                                          >  1:300023/1‑140 (MQ=255)

      cTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCt                                                                                                                          >  1:143190/1‑140 (MQ=255)

        tttGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTaa                                                                                                                        <  2:1404578/140‑1 (MQ=255)

             cGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCgg                                                                                                                   <  2:329367/140‑1 (MQ=255)

                      ccaccCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACttt                                                                                                          <  1:1301385/140‑1 (MQ=255)

                         ccccGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCt                                                                                                       <  1:917122/140‑1 (MQ=255)

                         ccccGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCt                                                                                                       <  1:1392509/140‑1 (MQ=255)

                            cGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTaaa                                                                                                    >  1:1246899/1‑140 (MQ=255)

                            cGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTaaa                                                                                                    <  1:402142/140‑1 (MQ=255)

                            cGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTaaa                                                                                                    <  2:28603/140‑1 (MQ=255)

                                 gTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGAc                                                                                               <  2:79273/140‑1 (MQ=255)

                                 gTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGAc                                                                                               <  1:675626/140‑1 (MQ=255)

                                 gTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGAc                                                                                               <  1:941323/140‑1 (MQ=255)

                                 gTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGAc                                                                                               <  1:828032/140‑1 (MQ=255)

                                 gTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGAc                                                                                               <  1:1266575/140‑1 (MQ=255)

                                    gCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATg                                                                                            >  1:1108590/1‑140 (MQ=255)

                                    gCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATg                                                                                            <  2:1033839/140‑1 (MQ=255)

                                    gCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATg                                                                                            >  1:424640/1‑140 (MQ=255)

                                     cTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGACTAATTCGGCAGTACTTTCCTAAAAAGACATGt                                                                                           >  2:402420/1‑140 (MQ=255)

                                      tGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTc                                                                                          <  2:710249/140‑1 (MQ=255)

                                      tGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTc                                                                                          <  2:1415900/140‑1 (MQ=255)

                                      tGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTc                                                                                          <  1:657455/140‑1 (MQ=255)

                                      tGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTc                                                                                          <  2:1189857/140‑1 (MQ=255)

                                       gAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCt                                                                                         >  1:73907/1‑140 (MQ=255)

                                          cAGGAGGGACAGCTGATGGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCGGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc                                                                                      <  2:87280/140‑1 (MQ=255)

                                          cAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACTCTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc                                                                                      <  1:773616/140‑1 (MQ=255)

                                          cAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc                                                                                      <  2:1059779/140‑1 (MQ=255)

                                          cAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc                                                                                      <  1:745806/140‑1 (MQ=255)

                                          cAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc                                                                                      <  2:1272987/140‑1 (MQ=255)

                                          cAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc                                                                                      <  1:817410/140‑1 (MQ=255)

                                          cAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc                                                                                      <  1:1243517/140‑1 (MQ=255)

                                          cAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc                                                                                      <  2:416280/140‑1 (MQ=255)

                                           aggaggGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGcc                                                                                     <  2:585349/140‑1 (MQ=255)

                                              aggGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCaa                                                                                  >  2:277007/1‑140 (MQ=255)

                                              aggGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCaa                                                                                  <  1:2987/140‑1 (MQ=255)

                                               gggACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAGAAACAGCTCTTGCCAAat                                                                                 >  2:1385301/1‑140 (MQ=18)

                                                  aCAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAAtata                                                                              >  2:382453/1‑140 (MQ=255)

                                                   cAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATAc                                                                             <  2:1311280/140‑1 (MQ=255)

                                                       tGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCaa                                                                         >  2:122674/1‑140 (MQ=255)

                                                        gATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAAc                                                                        <  1:385183/140‑1 (MQ=255)

                                                         aTAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACa                                                                       >  1:557902/1‑140 (MQ=255)

                                                         aTAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACa                                                                       <  2:1072667/140‑1 (MQ=255)

                                                         aTAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACa                                                                       <  1:338810/140‑1 (MQ=255)

                                                         aTAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACa                                                                       <  2:176297/140‑1 (MQ=255)

                                                             aaaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGaa                                                                   <  2:300023/140‑1 (MQ=255)

                                                             aaaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGaa                                                                   <  1:1027774/140‑1 (MQ=255)

                                                             aaaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGaa                                                                   <  2:607778/140‑1 (MQ=255)

                                                             aaaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCATGCCCAATATACTCAACATGaa                                                                   <  2:468155/140‑1 (MQ=255)

                                                              aaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAAc                                                                  <  1:993879/140‑1 (MQ=255)

                                                                cAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTa                                                                >  1:732936/1‑140 (MQ=255)

                                                                        aCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGt                                                        >  1:727470/1‑140 (MQ=255)

                                                                        aCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGt                                                        >  2:1482298/1‑140 (MQ=255)

                                                                             aGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTtgctg                                                   >  1:1461620/1‑140 (MQ=255)

                                                                              gCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTtgctgc                                                  <  2:1300797/140‑1 (MQ=255)

                                                                              gCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTtgctgc                                                  <  1:1455878/140‑1 (MQ=255)

                                                                               cACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTgctgct                                                 <  2:955576/140‑1 (MQ=255)

                                                                                cccTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTc                                                <  2:883660/139‑1 (MQ=255)

                                                                                cccTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTc                                                <  2:1386043/139‑1 (MQ=255)

                                                                                aCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTc                                                <  2:1108590/140‑1 (MQ=255)

                                                                                aCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTc                                                <  2:1246899/140‑1 (MQ=255)

                                                                                aCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTc                                                >  2:604830/1‑140 (MQ=255)

                                                                                aCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTc                                                <  2:557902/140‑1 (MQ=255)

                                                                                 ccTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCa                                               >  1:1126988/1‑140 (MQ=255)

                                                                                  cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAg                                              >  2:30311/1‑140 (MQ=255)

                                                                                   tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGc                                             >  1:1226800/1‑140 (MQ=255)

                                                                                    cAAAAACACCATCATACACTAAATCAGTAAGTTGGTAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCt                                            <  1:562558/140‑1 (MQ=255)

                                                                                    cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCt                                            <  1:1385301/140‑1 (MQ=255)

                                                                                          cacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAaacaa                                      <  2:1461620/140‑1 (MQ=255)

                                                                                            ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAacaaca                                    <  1:1141999/140‑1 (MQ=255)

                                                                                            ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAacaaca                                    >  2:621718/1‑140 (MQ=255)

                                                                                            ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAacaaca                                    >  1:71283/1‑140 (MQ=255)

                                                                                            ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAacaaca                                    >  2:508001/1‑140 (MQ=255)

                                                                                                  tACACTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCga                              >  1:1136551/1‑140 (MQ=255)

                                                                                                   acacTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCgag                             <  1:382453/140‑1 (MQ=255)

                                                                                                     acTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGaa                           >  1:870443/1‑140 (MQ=255)

                                                                                                     acTAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGaa                           <  1:527877/140‑1 (MQ=255)

                                                                                                       tAAATCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAg                         >  1:189049/1‑140 (MQ=255)

                                                                                                         aaTCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGac                       >  1:950340/1‑140 (MQ=255)

                                                                                                         aaTCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGac                       >  2:646405/1‑140 (MQ=255)

                                                                                                         aaTCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGac                       >  1:126354/1‑140 (MQ=255)

                                                                                                         aaTCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGac                       >  2:495342/1‑140 (MQ=255)

                                                                                                         aaTCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGac                       >  2:1058173/1‑140 (MQ=255)

                                                                                                         aaTCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGac                       >  1:19403/1‑140 (MQ=255)

                                                                                                          aTCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGaca                      >  1:1315445/1‑140 (MQ=255)

                                                                                                          aTCAGTAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGaca                      <  2:27301/140‑1 (MQ=255)

                                                                                                           tCAGAAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCAGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACACAACATTCACTAGATCCAGATGAAGCTCAGCGAAACAACAGAACCCGAAAGaccc                     >  2:343878/1‑138 (MQ=14)

                                                                                                               tAAGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGaa                 >  1:577270/1‑140 (MQ=255)

                                                                                                                 aGTTGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGt               >  1:804040/1‑140 (MQ=255)

                                                                                                                   ttGGCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTc             >  2:511367/1‑140 (MQ=255)

                                                                                                                     ggCAGCATCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCaa           >  2:1492560/1‑140 (MQ=255)

                                                                                                                         gcaTCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAaca       <  2:732936/140‑1 (MQ=37)

                                                                                                                         gcaTCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAaca       >  1:920528/1‑140 (MQ=37)

                                                                                                                            tCACCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCg    >  2:290262/1‑140 (MQ=18)

                                                                                                                              aCCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGaa  <  2:577270/140‑1 (MQ=17)

                                                                                                                              aCCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGaa  <  1:1482298/140‑1 (MQ=17)

                                                                                                                              aCCGAGAGCACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGaa  <  1:197166/140‑1 (MQ=17)

GCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAA  >  NC_000913/279802‑280067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`