BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,304,147	A→G	F86S (TTC→TCC)	ytcA ←	putative lipoprotein YtcA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,304,147	0	A	G	100.0%	369.8 / NA	99	F86S (TTC→TCC)	ytcA	putative lipoprotein YtcA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (42/57); total (42/57)

Only 100 of 103 total aligned reads displayed.

TACGCGCCAGATAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGAACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCAGAAAAACCAGCTGGG  >  NC_000913/4304011‑4304283

tACGCGCCAGATAACGAAAACGAGGGCAACCAGCGCCAACGCAACCTCTAACAGAGCAGGGAAGTTACTGCGAGGTGCTTTTGTCGGCGTACTTTCCATGAGCGCGTCTCAATTAGATTAGAAAAATGCCAGCCAGGACa                                                                                                                                       <  2:472637/140‑1 (MQ=255)

  cgcgCCAGATAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGc                                                                                                                                     <  2:445633/140‑1 (MQ=255)

  cgcgCCAGATAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGc                                                                                                                                     <  2:63696/140‑1 (MQ=255)

  cgcgCCAGATAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGc                                                                                                                                     <  1:1158606/140‑1 (MQ=255)

  cgcgCCAGATAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGc                                                                                                                                     <  2:617397/140‑1 (MQ=255)

  cgcgCCAGATAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGc                                                                                                                                     <  1:1185092/140‑1 (MQ=255)

  cgcgCCAGATAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGc                                                                                                                                     <  2:590263/140‑1 (MQ=255)

   gcgcCAGATAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCa                                                                                                                                    >  2:241882/1‑140 (MQ=255)

   gcgcCAGATAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCa                                                                                                                                    <  1:1401810/140‑1 (MQ=255)

     gcCAGATAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATg                                                                                                                                  <  1:1464086/140‑1 (MQ=255)

        aGATAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCg                                                                                                                               >  1:1003343/1‑140 (MQ=255)

        aGATAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCg                                                                                                                               >  1:794055/1‑140 (MQ=255)

        aGATAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCg                                                                                                                               >  2:711396/1‑140 (MQ=255)

          aTAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTa                                                                                                                             <  1:403774/140‑1 (MQ=255)

          aTAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTa                                                                                                                             <  2:1071584/140‑1 (MQ=255)

                       gggCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAgg                                                                                                                <  2:35732/140‑1 (MQ=255)

                        ggCAACCAGCGCCAACGCATCCGCTAACAGTGCAGGGAATTTGCTGCGAGGAGCTTTTTTCGGCGTCCTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAggg                                                                                                               <  2:1449823/140‑1 (MQ=255)

                        ggCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAggg                                                                                                               <  2:517639/140‑1 (MQ=255)

                        ggCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAggg                                                                                                               <  1:742660/140‑1 (MQ=255)

                        ggCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAggg                                                                                                               <  2:929214/140‑1 (MQ=255)

                         gCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGc                                                                                                              <  2:549454/140‑1 (MQ=255)

                         gCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGc                                                                                                              <  2:1303700/140‑1 (MQ=255)

                         gCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGc                                                                                                              <  2:831234/140‑1 (MQ=255)

                         gCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGc                                                                                                              <  1:466668/140‑1 (MQ=255)

                            aCCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGt                                                                                                           <  2:271863/140‑1 (MQ=255)

                             ccAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGta                                                                                                          >  1:1111670/1‑140 (MQ=255)

                               aGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGtata                                                                                                        >  2:1060755/1‑140 (MQ=255)

                                 cgcCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTataaa                                                                                                      >  2:1079130/1‑140 (MQ=255)

                                 cgcCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTataaa                                                                                                      >  2:331493/1‑140 (MQ=255)

                                   ccAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTataaata                                                                                                    >  2:496371/1‑140 (MQ=255)

                                       cGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTc                                                                                                <  2:1071493/140‑1 (MQ=255)

                                           aCCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGAc                                                                                            <  2:1064695/140‑1 (MQ=255)

                                           aCCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGAc                                                                                            >  1:1196973/1‑140 (MQ=255)

                                           aCCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGAc                                                                                            <  1:141462/140‑1 (MQ=255)

                                            ccACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACa                                                                                           <  1:35134/140‑1 (MQ=255)

                                             taCTAACAGAGAAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTGCATGAGCGCTTCTCATATAGTTTAGAAAAATGCCAGTCAGGACAGCCTGTCGTAGAGAGCAAAAATTGCGGTCTAAATTATTCCgttta                                                                                          >  2:1027963/2‑136 (MQ=255)

                                               cTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAAt                                                                                        >  1:697317/1‑140 (MQ=255)

                                                tAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATg                                                                                       <  2:502394/140‑1 (MQ=255)

                                                 aaCAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGc                                                                                      <  2:1229900/140‑1 (MQ=255)

                                                 aaCAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGc                                                                                      <  2:698807/140‑1 (MQ=255)

                                                 aaCAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGc                                                                                      <  2:570181/140‑1 (MQ=255)

                                                 aaCAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGc                                                                                      <  2:602885/140‑1 (MQ=255)

                                                  aCAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGcc                                                                                     <  2:1003343/140‑1 (MQ=255)

                                                   cAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCa                                                                                    >  1:438699/1‑140 (MQ=255)

                                                     gagCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGa                                                                                  >  2:931005/1‑140 (MQ=255)

                                                      agCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGAt                                                                                 <  1:718041/140‑1 (MQ=255)

                                                      agCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGAt                                                                                 >  1:1050263/1‑140 (MQ=255)

                                                      agCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGAACTTTCCATGAGCGCGTCCCAAATAGATTAGAAAAATGCCAGCCAGGCCAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGAt                                                                                 >  2:1405451/1‑140 (MQ=255)

                                                       gCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGAtt                                                                                >  1:852276/1‑140 (MQ=255)

                                                        cAGGGAATTTACTGCGAGGAGCTTTTTTGGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGAGAAGATTGCAAAAAGGGCGGAATAAATAATTCCGACAAATGCCAGATTg                                                                               >  2:848335/1‑140 (MQ=255)

                                                        cAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTg                                                                               >  1:896536/1‑140 (MQ=255)

                                                        cAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTg                                                                               >  1:525668/1‑140 (MQ=255)

                                                        cAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTg                                                                               >  2:1241275/1‑140 (MQ=255)

                                                          gggAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGat                                                                             >  1:1500809/1‑140 (MQ=255)

                                                                 tACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGcc                                                                      <  2:794055/140‑1 (MQ=255)

                                                                  aCTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGccc                                                                     <  1:1060755/140‑1 (MQ=255)

                                                                   cTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCg                                                                    <  1:1174435/140‑1 (MQ=255)

                                                                     gCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCt                                                                  <  2:1523096/140‑1 (MQ=255)

                                                                              ttttttCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTc                                                         <  2:1227001/140‑1 (MQ=255)

                                                                                ttttCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGc                                                       <  1:1525150/140‑1 (MQ=255)

                                                                                ttttCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGc                                                       <  1:1448010/140‑1 (MQ=255)

                                                                                 tttCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGcc                                                      <  1:241882/140‑1 (MQ=255)

                                                                                  ttCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCt                                                     <  2:1111670/140‑1 (MQ=255)

                                                                                        gTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGtgat                                               <  1:931005/140‑1 (MQ=255)

                                                                                         tACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGtgatg                                              <  1:496371/140‑1 (MQ=255)

                                                                                         tACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGtgatg                                              <  1:711396/140‑1 (MQ=255)

                                                                                              tCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGt                                         <  2:697317/140‑1 (MQ=255)

                                                                                                cATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCa                                       <  1:1098328/140‑1 (MQ=255)

                                                                                                   gAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCaaaa                                    >  1:920464/1‑140 (MQ=255)

                                                                                                    aGCGCGTCTCAGATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAAt                                   >  1:462365/1‑140 (MQ=255)

                                                                                                     gcgcGTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATa                                  >  2:121336/1‑140 (MQ=255)

                                                                                                      cgcgTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATaa                                 >  2:532345/1‑140 (MQ=255)

                                                                                                      cgcgTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATaa                                 >  2:1183772/1‑140 (MQ=255)

                                                                                                       gcgTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAg                                <  2:438699/140‑1 (MQ=255)

                                                                                                        cgTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAgg                               >  2:1113332/1‑140 (MQ=255)

                                                                                                        cgTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAgg                               >  1:1514585/1‑140 (MQ=255)

                                                                                                        cgTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAgg                               >  1:946612/1‑140 (MQ=255)

                                                                                                        cgTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAgg                               >  1:746709/1‑140 (MQ=255)

                                                                                                        cgTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAgg                               >  1:605405/1‑140 (MQ=255)

                                                                                                        cgTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAgg                               >  2:1408501/1‑140 (MQ=255)

                                                                                                         gTCTCAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGc                              <  2:1432454/140‑1 (MQ=255)

                                                                                                          tctcAAATAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCt                             >  2:782498/1‑140 (MQ=255)

                                                                                                              aaaTAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCa                         <  1:10615/140‑1 (MQ=255)

                                                                                                              aaaTAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCa                         >  2:1410704/1‑140 (MQ=255)

                                                                                                               aaTAGATTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCaa                        <  1:1241275/140‑1 (MQ=255)

                                                                                                                    aTTAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGgcg                   <  2:746709/140‑1 (MQ=255)

                                                                                                                      tAGAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCa                 >  2:801828/1‑140 (MQ=255)

                                                                                                                        gAAAAATGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCAGa               >  2:1252513/1‑140 (MQ=255)

                                                                                                                             aTGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCAGAAAAAc          >  1:483126/1‑140 (MQ=255)

                                                                                                                              tGCCAGCCAGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCAGAAAAAcc         >  1:555463/1‑140 (MQ=255)

                                                                                                                               gccagccaGGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCAGAAAAACCa        >  2:378548/1‑140 (MQ=255)

                                                                                                                                ccagccagGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCAGAAAAACCAg       <  1:1079130/140‑1 (MQ=255)

                                                                                                                                 cagccagGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCAGAAAAACCAGc      >  1:1013131/1‑140 (MQ=255)

                                                                                                                                 cagccagGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAACTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCAGAAAAACCAGc      <  2:605405/140‑1 (MQ=255)

                                                                                                                                  agccagGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCAGAAAAACCAGCt     <  1:575875/140‑1 (MQ=255)

                                                                                                                                   gccagGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCAGAAAAACCAGCTg    >  1:1244178/1‑140 (MQ=255)

                                                                                                                                   gccagGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCAGAAAAACCAGCTg    >  1:236847/1‑140 (MQ=255)

                                                                                                                                   gccagGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCAGAAAAACCAGCTg    >  2:1236681/1‑140 (MQ=255)

                                                                                                                                    ccagGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCAGAAAAACCAGCTgg   >  2:737002/1‑140 (MQ=255)

                                                                                                                                     cagGACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCAGAAAAACCAGCTggg  <  2:896536/140‑1 (MQ=255)

TACGCGCCAGATAACGAAAACAAGGGCAACCAGCGCCAACGCAACCACTAACAGAGCAGGGAATTTACTGCGAGGAGCTTTTTTCGGCGTACTTTCCATGAGCGCGTCTCAAATAGATTAGAAAAATGCCAGCCAGAACAGCATGGCGTAGAGAGCAAAAAGGGCGGTATAAATAATTCCGACAAATGCCAGATTGATATTTGCCCGCTGAATAACTCGCCTCGTGATGAGCGTCAAAATAAGGCTGGCAATGGCGCAGAAAAACCAGCTGGG  >  NC_000913/4304011‑4304283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`