BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,539,762	A→G	intergenic (‑261/‑1195)	nanC ← / → fimB	N‑acetylneuraminic acid outer membrane channel/regulator for fimA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,539,762	0	A	G	100.0%	386.3 / NA	101	intergenic (‑261/‑1195)	nanC/fimB	N‑acetylneuraminic acid outer membrane channel/regulator for fimA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (63/38); total (63/38)

Only 100 of 101 total aligned reads displayed.

ATTTTTTTGTATAAGGTCTCCTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTACTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCGAGATGCC  >  NC_000913/4539627‑4539898

atTTTTTTGTATAAGGTCTCCTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCa                                                                                                                                      >  2:1191596/1‑140 (MQ=255)

  ttttttGTATAAGGTCTCCTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAGTACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAAt                                                                                                                                    <  1:494214/140‑1 (MQ=255)

  ttttttGTATAAGGTCTCCTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAAt                                                                                                                                    <  2:1055890/140‑1 (MQ=255)

       tGTATAAGGTCTCCTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCAtt                                                                                                                               <  2:834743/140‑1 (MQ=255)

            aaGGTCTCCTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTAcc                                                                                                                          <  2:90309/140‑1 (MQ=255)

            aaGGTCTCCTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTAcc                                                                                                                          <  2:1367925/140‑1 (MQ=255)

               gTCTCCTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCag                                                                                                                       <  2:85738/140‑1 (MQ=255)

               gTCTCCTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCag                                                                                                                       <  1:1283295/140‑1 (MQ=255)

               gTCTCCTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCag                                                                                                                       <  1:622295/140‑1 (MQ=255)

                 ctcCTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCagag                                                                                                                     <  1:1275173/140‑1 (MQ=255)

                 ctcCTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCagag                                                                                                                     >  2:485070/1‑140 (MQ=255)

                 ctcCTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCagag                                                                                                                     <  2:714675/140‑1 (MQ=255)

                   ccTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTc                                                                                                                   >  1:673084/1‑140 (MQ=255)

                   ccTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTc                                                                                                                   >  1:194370/1‑140 (MQ=255)

                   ccTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTc                                                                                                                   >  1:613505/1‑140 (MQ=255)

                   ccTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTc                                                                                                                   >  2:1234919/1‑140 (MQ=255)

                     tgtgAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCAt                                                                                                                 >  1:953224/1‑140 (MQ=255)

                       tgAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATaa                                                                                                               >  2:488800/1‑140 (MQ=255)

                        gAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATaaa                                                                                                              >  2:1219209/1‑140 (MQ=255)

                            aaTCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAg                                                                                                          >  1:1275798/1‑140 (MQ=255)

                             aTCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGa                                                                                                         <  1:702827/140‑1 (MQ=255)

                              tctcTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGaa                                                                                                        <  2:587703/140‑1 (MQ=255)

                              tctcTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGaa                                                                                                        >  1:454262/1‑140 (MQ=255)

                              tctcTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGACATAAAATAGaa                                                                                                        >  1:1493377/1‑140 (MQ=255)

                                   tttCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCt                                                                                                   >  1:1212603/1‑140 (MQ=255)

                                             tttAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCa                                                                                         <  2:1534349/140‑1 (MQ=255)

                                             tttAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCa                                                                                         <  2:1210865/140‑1 (MQ=255)

                                                    aaaCAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCat                                                                                  <  1:56054/140‑1 (MQ=255)

                                                     aaCAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCa                                                                                         >  1:1313783/1‑132 (MQ=255)

                                                     aaCAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCa                                                                                         <  2:1313783/132‑1 (MQ=255)

                                                     aaCAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCata                                                                                 >  2:970787/1‑140 (MQ=255)

                                                     aaCAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCata                                                                                 >  2:1280125/1‑140 (MQ=255)

                                                     aaCAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCata                                                                                 >  2:628936/1‑140 (MQ=255)

                                                      aCAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCatat                                                                                <  1:1191596/140‑1 (MQ=255)

                                                       cAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATAtt                                                                               >  1:551079/1‑140 (MQ=255)

                                                       cAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATAtt                                                                               >  1:485422/1‑140 (MQ=255)

                                                       cAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATAtt                                                                               >  2:505157/1‑140 (MQ=255)

                                                          agaTCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCt                                                                            >  2:671027/1‑140 (MQ=255)

                                                           gaTCCAGATTAAATACCTGAGTATAAGATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCtt                                                                           >  2:1289767/1‑140 (MQ=255)

                                                           gaTCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCtt                                                                           <  2:673084/140‑1 (MQ=255)

                                                            aTCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCttt                                                                          >  1:1487521/1‑140 (MQ=255)

                                                            aTCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCttt                                                                          >  2:643857/1‑140 (MQ=255)

                                                             tCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTc                                                                         >  1:1500285/1‑140 (MQ=255)

                                                               cAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAg                                                                       >  2:418629/1‑140 (MQ=255)

                                                                    tAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGa                                                                  <  1:1219209/140‑1 (MQ=255)

                                                                      aaTACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGGGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAg                                                                >  2:1202374/1‑140 (MQ=255)

                                                                       aTACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGt                                                               >  1:70585/1‑140 (MQ=255)

                                                                          ccTGGGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCg                                                            <  1:1411849/140‑1 (MQ=255)

                                                                            tGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGtt                                                          >  2:1437352/1‑140 (MQ=255)

                                                                            tGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGtt                                                          >  2:488887/1‑140 (MQ=255)

                                                                            tGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGtt                                                          >  1:1339459/1‑140 (MQ=255)

                                                                             gAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGttt                                                         >  1:499322/1‑140 (MQ=255)

                                                                              aGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGtttt                                                        >  1:742091/1‑140 (MQ=255)

                                                                              aGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGtttt                                                        >  2:732369/1‑140 (MQ=255)

                                                                              aGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGtttt                                                        >  2:1219951/1‑140 (MQ=255)

                                                                              aGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGtttt                                                        >  1:1453352/1‑140 (MQ=255)

                                                                              aGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGtttt                                                        >  2:542848/1‑140 (MQ=255)

                                                                              aGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGtttt                                                        >  1:1244980/1‑140 (MQ=255)

                                                                              aGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGtttt                                                        >  1:176038/1‑140 (MQ=255)

                                                                                     aaTCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCAcc                                                 <  1:601447/140‑1 (MQ=255)

                                                                                        ctctTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAg                                                                <  1:610868/122‑1 (MQ=255)

                                                                                        ctctTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAg                                                                >  2:610868/1‑122 (MQ=255)

                                                                                        ctctTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGa                                              >  2:1257589/1‑140 (MQ=255)

                                                                                        ctctTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGa                                              >  1:563335/1‑140 (MQ=255)

                                                                                          cttctGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATg                                            >  2:398475/1‑140 (MQ=255)

                                                                                          cttctGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATg                                            >  2:486116/1‑140 (MQ=255)

                                                                                          cttctGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATg                                            >  2:66251/1‑140 (MQ=255)

                                                                                          cttctGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATg                                            >  2:1432783/1‑140 (MQ=255)

                                                                                          cttctGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATg                                            >  2:1238183/1‑140 (MQ=255)

                                                                                          cttctGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATg                                            >  1:1178769/1‑140 (MQ=255)

                                                                                             ctGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATgaga                                         <  2:953224/140‑1 (MQ=255)

                                                                                               gATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGagaaa                                       <  1:496512/140‑1 (MQ=255)

                                                                                                aTGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGagaaag                                      <  1:505157/140‑1 (MQ=255)

                                                                                                 tGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGagaaaga                                     >  1:984442/1‑140 (MQ=255)

                                                                                                   tttAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAAc                                   >  2:594349/1‑140 (MQ=255)

                                                                                                   tttAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAAc                                   >  2:828783/1‑140 (MQ=255)

                                                                                                     tAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTg                                 >  2:837752/1‑140 (MQ=255)

                                                                                                     tAATTGATTTGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTg                                 >  2:362058/1‑140 (MQ=255)

                                                                                                            tttGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGAt                          <  2:1339459/140‑1 (MQ=255)

                                                                                                            tttGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGAt                          >  1:100027/1‑140 (MQ=255)

                                                                                                             ttGAATGTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATg                         >  2:1455281/1‑140 (MQ=255)

                                                                                                                   gTTCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGcc                   <  2:742091/140‑1 (MQ=255)

                                                                                                                    ttCGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCa                  <  1:398475/140‑1 (MQ=255)

                                                                                                                      cGTAAGCTATATCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATa                >  1:881810/1‑140 (MQ=255)

                                                                                                                              atatCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCga        <  2:176038/140‑1 (MQ=255)

                                                                                                                              atatCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCga        >  1:670565/1‑140 (MQ=255)

                                                                                                                               tatCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGAGTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCgag       >  2:1212506/1‑140 (MQ=255)

                                                                                                                               tatCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCgag       >  2:543135/1‑140 (MQ=255)

                                                                                                                               tatCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCgag       >  1:1329097/1‑140 (MQ=255)

                                                                                                                               tatCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCgag       <  1:671027/140‑1 (MQ=255)

                                                                                                                               tatCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCgag       >  2:77163/1‑140 (MQ=255)

                                                                                                                                atCACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCgaga      >  1:549484/1‑140 (MQ=255)

                                                                                                                                  cACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCGAGATg    <  2:243614/140‑1 (MQ=255)

                                                                                                                                  cACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCGAGATg    <  2:1487521/140‑1 (MQ=255)

                                                                                                                                  cACTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCGAGATg    <  1:488800/140‑1 (MQ=255)

                                                                                                                                    cTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCGAGATGcc  <  1:542848/140‑1 (MQ=255)

                                                                                                                                    cTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCGAGATGcc  <  1:1257589/140‑1 (MQ=255)

                                                                                                                                    cTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCGAGATGcc  <  1:828783/140‑1 (MQ=255)

                                                                                                                                    cTTGCTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCGAGATGcc  <  1:990016/140‑1 (MQ=255)

                                                                                                                                    cTTGCTCAATCCATTTTACCCAGAGTCATAAAAGAGAATGTCTGTTGATCTCCTTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCTCCCGATGAGAAAGAACTGAAGAGATGTTTGCCATAGATTGCGAGATGcc  <  2:1493377/140‑1 (MQ=255)

ATTTTTTTGTATAAGGTCTCCTGTGAAAAATCTCTTTTCACATTATTTAAATAAACAGAGATCCAGATTAAATACCTGAGTATAAAATCTCTTCTGATGTTTAATTGATTTGAATGTTCGTAAGCTATATCACTTACTCAATCCATTTTACCCAGAGTCATAAAATAGAATGTCTGTTGATCTCATTTTCATATTCCTTTCAGACTGAAGTGCGTTTTCATCACCCGATGAGAAAGAACTGAAGTGATGTTTGCCATAGATTGCGAGATGCC  >  NC_000913/4539627‑4539898

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`