BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,639,212	A→G	E345E (GAA→GAG)	creD →	putative inner membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,639,212	0	A	G	100.0%	419.8 / NA	111	E345E (GAA→GAG)	creD	putative inner membrane protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (49/62); total (49/62)

Only 100 of 113 total aligned reads displayed.

TCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGGT  >  NC_000913/4639077‑4639347

tCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATa                                                                                                                                     <  1:1064754/140‑1 (MQ=255)

tCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATa                                                                                                                                     >  2:352953/1‑140 (MQ=255)

tCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATa                                                                                                                                     <  2:824923/140‑1 (MQ=255)

tCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATa                                                                                                                                     <  1:852388/140‑1 (MQ=255)

tCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATa                                                                                                                                     >  1:578298/1‑140 (MQ=255)

tCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATa                                                                                                                                     >  1:1437374/1‑140 (MQ=255)

 ctgctgATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATAc                                                                                                                                    <  2:173050/140‑1 (MQ=255)

  tgctgATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATAcc                                                                                                                                   >  2:54348/1‑140 (MQ=255)

  tgctgATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATAcc                                                                                                                                   >  2:1035374/1‑140 (MQ=255)

     tgATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGt                                                                                                                                >  1:1497078/1‑140 (MQ=255)

      gATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGTTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGtt                                                                                                                               <  1:1397976/140‑1 (MQ=255)

         tGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAGCGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTa                                                                                                                            >  2:914000/1‑140 (MQ=255)

         tGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTa                                                                                                                            >  2:27729/1‑140 (MQ=255)

         tGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTa                                                                                                                            >  2:1439921/1‑140 (MQ=255)

           cACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTAcc                                                                                                                          <  2:527521/140‑1 (MQ=255)

           cACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTAcc                                                                                                                          <  1:1246344/140‑1 (MQ=255)

                  ttttATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCAt                                                                                                                   <  1:1489333/140‑1 (MQ=255)

                      aTGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGAt                                                                                                               >  2:417039/1‑140 (MQ=255)

                      aTGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGAt                                                                                                               <  1:618149/140‑1 (MQ=255)

                           gTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCg                                                                                                          <  2:633029/140‑1 (MQ=255)

                            ttCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGc                                                                                                         <  2:330692/140‑1 (MQ=255)

                            ttCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTGGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGc                                                                                                         <  2:1416968/140‑1 (MQ=255)

                              cTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCa                                                                                                       >  2:1024645/1‑140 (MQ=255)

                                ttGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGt                                                                                                     <  2:582016/140‑1 (MQ=255)

                                ttGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGt                                                                                                     <  2:1536257/140‑1 (MQ=255)

                                ttGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGt                                                                                                     <  2:94735/140‑1 (MQ=255)

                                          aaCGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTgggg                                                                                           <  1:403123/140‑1 (MQ=255)

                                          aaCGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTgggg                                                                                           <  2:1437374/140‑1 (MQ=255)

                                           aCGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGc                                                                                          >  2:1208915/1‑140 (MQ=255)

                                                cACCGCGCAACGTTTAAACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATaa                                                                                     >  2:1251043/1‑140 (MQ=255)

                                                   cgcgCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGa                                                                                  <  2:880429/140‑1 (MQ=255)

                                                   cgcgCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGa                                                                                  <  1:271842/140‑1 (MQ=255)

                                                    gcgcAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGaa                                                                                 <  1:54348/140‑1 (MQ=255)

                                                    gcgcAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGaa                                                                                 <  1:352953/140‑1 (MQ=255)

                                                     cgcAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAAc                                                                                <  1:1070588/140‑1 (MQ=255)

                                                      gcAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACg                                                                               <  1:824745/140‑1 (MQ=255)

                                                       cAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACgg                                                                              <  1:1532773/140‑1 (MQ=255)

                                                          cGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGtat                                                                           <  1:1208915/140‑1 (MQ=255)

                                                            tttAAACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGtattt                                                                         <  1:1251043/140‑1 (MQ=255)

                                                                   ccAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCa                                                                  <  2:599691/140‑1 (MQ=255)

                                                                    cAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCaa                                                                 >  2:531388/1‑140 (MQ=255)

                                                                    cAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCaa                                                                 >  1:1396743/1‑140 (MQ=255)

                                                                    cAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCaa                                                                 >  2:298813/1‑140 (MQ=255)

                                                                     aaTGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAg                                                                <  2:881360/140‑1 (MQ=255)

                                                                     aaTGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAg                                                                <  1:335836/140‑1 (MQ=255)

                                                                     aaTGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAg                                                                <  2:1497078/140‑1 (MQ=255)

                                                                     aaTGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAg                                                                <  1:1546484/140‑1 (MQ=255)

                                                                      aTGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGc                                                               <  2:677081/140‑1 (MQ=255)

                                                                      aTGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGACATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGc                                                               <  2:1259499/140‑1 (MQ=255)

                                                                       tGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCg                                                              <  2:784252/140‑1 (MQ=255)

                                                                       tGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCg                                                              >  1:93307/1‑140 (MQ=255)

                                                                       tGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCg                                                              >  1:794218/1‑140 (MQ=255)

                                                                       tGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCg                                                              >  1:794979/1‑140 (MQ=255)

                                                                          aaTATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTa                                                           >  2:83427/1‑140 (MQ=255)

                                                                           atatTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTAt                                                          <  1:1368069/140‑1 (MQ=255)

                                                                                 gCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAg                                                    >  1:573817/1‑140 (MQ=255)

                                                                                 gCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAg                                                    <  1:278004/140‑1 (MQ=255)

                                                                                 gCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAg                                                    <  2:1110985/140‑1 (MQ=255)

                                                                                 gCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAg                                                    >  1:1409920/1‑140 (MQ=255)

                                                                                    ggtggGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGtt                                                 >  1:1402084/1‑140 (MQ=255)

                                                                                    ggtggGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGtt                                                 >  1:1201809/1‑140 (MQ=255)

                                                                                      tggGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTgg                                               >  2:923517/1‑140 (MQ=255)

                                                                                        gggCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGCTGGTg                                             >  2:150232/1‑140 (MQ=255)

                                                                                        gggCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGACATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTg                                             >  2:1308861/1‑140 (MQ=255)

                                                                                           cTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCGGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCaa                                          <  1:1526564/140‑1 (MQ=255)

                                                                                           cTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCaa                                          <  1:417039/140‑1 (MQ=255)

                                                                                             ttCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACa                                        >  2:1167991/1‑140 (MQ=255)

                                                                                               cATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGc                                      >  2:1053192/1‑140 (MQ=255)

                                                                                                aTTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCa                                     <  1:152462/140‑1 (MQ=255)

                                                                                                  tGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtg                                   <  1:859822/140‑1 (MQ=255)

                                                                                                    gTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtgtt                                 >  1:193127/1‑140 (MQ=255)

                                                                                                     tGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtgttg                                >  1:872315/1‑140 (MQ=255)

                                                                                                        tGTTTTATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAGTCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTGTTGAAAGGTTGGTGCAACAGCATGTTGttt                             >  2:38350/1‑140 (MQ=255)

                                                                                                            ttATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTAccc                         <  1:788643/140‑1 (MQ=255)

                                                                                                            ttATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTAccc                         >  1:1084234/1‑140 (MQ=255)

                                                                                                               tttGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTcg                      >  1:190022/1‑140 (MQ=255)

                                                                                                                ttGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTcgc                     <  2:546643/140‑1 (MQ=255)

                                                                                                                 tGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTcgcg                    <  1:1056421/140‑1 (MQ=255)

                                                                                                                 tGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTcgcg                    <  1:27729/140‑1 (MQ=255)

                                                                                                                 tGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTcgcg                    <  2:918007/140‑1 (MQ=255)

                                                                                                                  gCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCgcgc                   >  1:958854/1‑140 (MQ=255)

                                                                                                                    tctTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtg                 >  2:60913/1‑140 (MQ=255)

                                                                                                                    tctTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtg                 >  1:1313606/1‑140 (MQ=255)

                                                                                                                    tctTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtg                 >  1:2599/1‑140 (MQ=255)

                                                                                                                    tctTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtg                 >  1:34363/1‑140 (MQ=255)

                                                                                                                    tctTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGCATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtg                 >  2:1303447/1‑140 (MQ=255)

                                                                                                                     ctTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtgt                <  2:1142317/140‑1 (MQ=255)

                                                                                                                     ctTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtgt                <  1:776978/140‑1 (MQ=255)

                                                                                                                      ttGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtgtt               >  1:1373683/1‑140 (MQ=255)

                                                                                                                         cTGGCGCTTTCTGAGCATAACGGTTTTACCGTGGCATGGATAATCGCCAGTTTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGAGGTATTGAAAGGTTGGTCCAACAGCATGTTGTTTACTCTCGCGCTgttgtt            >  2:565166/1‑140 (MQ=255)

                                                                                                                            gcgcTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCt         <  2:958854/140‑1 (MQ=255)

                                                                                                                              gcTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTgg       <  2:145903/140‑1 (MQ=255)

                                                                                                                              gcTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTgg       <  1:991178/140‑1 (MQ=255)

                                                                                                                                tttCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGAt     <  1:531388/140‑1 (MQ=255)

                                                                                                                                 ttCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATg    >  2:434960/1‑140 (MQ=255)

                                                                                                                                  tCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATgg   >  1:931402/1‑140 (MQ=255)

                                                                                                                                  tCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATgg   >  1:45179/1‑140 (MQ=255)

                                                                                                                                   cTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGgt  <  1:923517/140‑1 (MQ=255)

                                                                                                                                   cTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGgt  <  1:995824/140‑1 (MQ=255)

                                                                                                                                   cTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGgt  <  2:193127/140‑1 (MQ=255)

TCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGGT  >  NC_000913/4639077‑4639347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`