BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	407,543	A→G	K39R (AAG→AGG)	aroM →	protein AroM

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	407,543	0	A	G	100.0%	513.6 / NA	136	K39R (AAG→AGG)	aroM	protein AroM
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (68/68); total (68/68)

Only 100 of 140 total aligned reads displayed.

GAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAAGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTGCAAGGTGTGGTTGAA  >  NC_000913/407407‑407679

gaaaAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGtt                                                                                                                                       <  1:123205/140‑1 (MQ=255)

aaaaaGTAAGGAGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGtt                                                                                                                                       <  2:985485/139‑1 (MQ=255)

        aGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTg                                                                                                                               >  1:354430/1‑140 (MQ=255)

         ggTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTga                                                                                                                              <  2:1082006/140‑1 (MQ=255)

         ggTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTga                                                                                                                              <  2:847772/140‑1 (MQ=255)

           tGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTgaag                                                                                                                            >  1:338312/1‑140 (MQ=255)

            ggATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTgaaga                                                                                                                           <  2:1238962/140‑1 (MQ=255)

             gATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTgaagaa                                                                                                                          >  1:1380143/1‑140 (MQ=255)

               tGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGt                                                                                                                        >  1:359470/1‑140 (MQ=255)

                    aaTGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATgg                                                                                                                   <  1:957591/140‑1 (MQ=255)

                     aTGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGc                                                                                                                  >  2:187818/1‑140 (MQ=255)

                      tGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCg                                                                                                                 <  1:327124/140‑1 (MQ=255)

                      tGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCg                                                                                                                 <  1:1319842/140‑1 (MQ=255)

                      tGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCg                                                                                                                 <  1:1018508/140‑1 (MQ=255)

                       gAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCgg                                                                                                                >  2:842421/1‑140 (MQ=255)

                        aGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGa                                                                                                               >  1:1081010/1‑140 (MQ=255)

                         gTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAg                                                                                                              <  1:193767/140‑1 (MQ=255)

                           gCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTa                                                                                                            <  2:1473230/140‑1 (MQ=255)

                           gCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTa                                                                                                            >  2:1533667/1‑140 (MQ=255)

                           gCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTa                                                                                                            >  2:258712/1‑140 (MQ=255)

                            cgtcgtTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTAc                                                                                                           >  1:762105/1‑140 (MQ=255)

                            cgtcgtTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTAc                                                                                                           <  1:1526128/140‑1 (MQ=255)

                            cgtcgtTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTAc                                                                                                           >  1:55871/1‑140 (MQ=255)

                            cgtcgtTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTAc                                                                                                           >  2:345799/1‑140 (MQ=255)

                            cgtcgtTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTAc                                                                                                           >  2:29876/1‑140 (MQ=255)

                              tcgtTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTAcgc                                                                                                         >  1:1336786/1‑140 (MQ=255)

                              tcgtTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTAcgc                                                                                                         >  1:447634/1‑140 (MQ=255)

                              tcgtTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTAcgc                                                                                                         >  1:1171587/1‑140 (MQ=255)

                              tcattGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTAcgc                                                                                                         >  2:582926/4‑140 (MQ=255)

                               cgtTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTAcgcg                                                                                                        >  1:553769/1‑140 (MQ=255)

                                gtTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACgcgc                                                                                                       >  2:21316/1‑140 (MQ=255)

                                       aTCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGc                                                                                                >  2:1336769/1‑140 (MQ=255)

                                         ccTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAg                                                                                              <  1:300527/140‑1 (MQ=255)

                                             aCCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGa                                                                                          <  1:929441/140‑1 (MQ=255)

                                               cATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAg                                                                                        <  2:1463777/140‑1 (MQ=255)

                                                  cGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGaca                                                                                     >  2:73106/1‑140 (MQ=255)

                                                  cGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGaca                                                                                     <  2:708412/140‑1 (MQ=255)

                                                  cGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGaca                                                                                     <  1:1091067/140‑1 (MQ=255)

                                                  cGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGaca                                                                                     <  2:535669/140‑1 (MQ=255)

                                                  cGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGac                                                                                      <  2:1333929/139‑1 (MQ=255)

                                                   ggCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGacac                                                                                    <  1:993746/140‑1 (MQ=255)

                                                    gCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACAcc                                                                                   <  2:1313013/140‑1 (MQ=255)

                                                    gCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGCTAAGTCGTGAAGTAGTGATGGCGGAGTACGCGCCAGAAGTAGGCGAAGACAcc                                                                                   >  2:385992/1‑140 (MQ=255)

                                                       ttGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAAAAGCAGGCGAAGACACCAtt                                                                                <  2:238235/140‑1 (MQ=255)

                                                         gTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATtct                                                                              <  1:1143125/140‑1 (MQ=255)

                                                          tACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATtctc                                                                             >  2:1500982/1‑140 (MQ=255)

                                                           aCCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTca                                                                            <  2:1458724/140‑1 (MQ=255)

                                                           aCCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTca                                                                            <  1:387704/140‑1 (MQ=255)

                                                           aCCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTca                                                                            <  2:762105/140‑1 (MQ=255)

                                                             cTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTcaca                                                                          <  2:359470/140‑1 (MQ=255)

                                                             cTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTcaca                                                                          <  2:1434555/140‑1 (MQ=255)

                                                             cTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTcaca                                                                          <  1:1030083/140‑1 (MQ=255)

                                                             cTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTcaca                                                                          <  1:290762/140‑1 (MQ=255)

                                                               aTGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACatt                                                                        >  1:376044/1‑140 (MQ=255)

                                                               aTGCAGGAAGCTTTGCCGCTCCTGACGGAATACATTGACGAGGATATTATTTCCCATCATAGCCTGCTGAGGAGGTTAAGTCGCGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGGGAAGACACCATTCTCACatt                                                                        >  2:667285/1‑140 (MQ=255)

                                                                tGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACatta                                                                       >  2:1364315/1‑140 (MQ=255)

                                                                  cAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACattatt                                                                     >  2:690406/1‑140 (MQ=255)

                                                                    ggAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCTTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTaa                                                                   >  1:321879/1‑140 (MQ=255)

                                                                    ggAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATtct                                                                              >  1:697972/1‑129 (MQ=255)

                                                                    ggAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTaa                                                                   >  1:869906/1‑140 (MQ=255)

                                                                    ggAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTaa                                                                   >  1:1468611/1‑140 (MQ=255)

                                                                    ggAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGGGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTaa                                                                   >  1:637852/1‑140 (MQ=255)

                                                                     gAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTaaa                                                                  >  2:1237675/1‑140 (MQ=255)

                                                                      aaGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAAt                                                                 >  2:973238/1‑140 (MQ=255)

                                                                          tttGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACa                                                             <  1:1297029/140‑1 (MQ=255)

                                                                           ttGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACaa                                                            >  1:639626/1‑140 (MQ=255)

                                                                               cGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAg                                                        <  1:408553/140‑1 (MQ=255)

                                                                                 cTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCt                                                      <  2:1171587/140‑1 (MQ=255)

                                                                                            aTACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGCACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGttt                                           >  1:202173/1‑140 (MQ=255)

                                                                                              aCATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTcg                                         <  1:1533667/140‑1 (MQ=255)

                                                                                                 ttGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGt                                      >  1:775872/1‑140 (MQ=255)

                                                                                                  tGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTc                                     >  1:1104577/1‑140 (MQ=255)

                                                                                                  tGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGCTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTc                                     >  2:269932/1‑140 (MQ=255)

                                                                                                   gACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCt                                                      >  1:1461243/1‑122 (MQ=255)

                                                                                                    aCGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGc                                   >  1:1422463/1‑140 (MQ=255)

                                                                                                     cGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCa                                  >  2:866385/1‑140 (MQ=255)

                                                                                                     cGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCa                                  >  2:1074227/1‑140 (MQ=255)

                                                                                                     cGAAGATAATATTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCa                                  <  2:1081010/140‑1 (MQ=255)

                                                                                                          ataataTTTCCCATCATAGCCTGCTGGGGAGGATAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTg                             >  2:1320301/1‑140 (MQ=255)

                                                                                                              tatTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGc                         >  2:874050/1‑140 (MQ=255)

                                                                                                              tatTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGc                         <  2:426870/140‑1 (MQ=255)

                                                                                                              tatTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGc                         >  2:1165252/1‑140 (MQ=255)

                                                                                                              tatTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGc                         <  2:338312/140‑1 (MQ=255)

                                                                                                              tatTTCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGc                         <  1:860086/140‑1 (MQ=255)

                                                                                                                  tCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGa                     <  1:973238/140‑1 (MQ=255)

                                                                                                                  tCCCATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGa                     <  1:563031/140‑1 (MQ=255)

                                                                                                                   cccATCATAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGAc                    >  1:1140394/1‑140 (MQ=255)

                                                                                                                      atcatAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTg                 >  1:107070/1‑140 (MQ=255)

                                                                                                                      atcatAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTg                 >  2:1291210/1‑140 (MQ=255)

                                                                                                                        catAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTGCa               >  2:497433/1‑140 (MQ=255)

                                                                                                                        catAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTGCa               >  2:289852/1‑140 (MQ=255)

                                                                                                                        catAGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTGCa               >  2:583600/1‑140 (MQ=255)

                                                                                                                           aGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTGCAAgg            <  1:1312453/140‑1 (MQ=255)

                                                                                                                           aGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTGCAAgg            <  1:247977/140‑1 (MQ=255)

                                                                                                                           aGCCTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGCACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTGCAAgg            <  2:202173/140‑1 (MQ=255)

                                                                                                                             ccTGCTGGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTGCAAGgtg          <  1:497433/140‑1 (MQ=255)

                                                                                                                                 ctgGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTGCAAGGTGTGGt      >  2:89945/1‑140 (MQ=255)

                                                                                                                                 ctgGGGAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTGCAAGGTGTGGt      >  2:321102/1‑140 (MQ=255)

                                                                                                                                    gggAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTGCAAGGTGTGGTTGa   >  2:612762/1‑140 (MQ=255)

                                                                                                                                     ggAGGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTGCAAGGTGTGGTTGaa  <  2:1017152/140‑1 (MQ=255)

GAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAAGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTGCAAGGTGTGGTTGAA  >  NC_000913/407407‑407679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`