BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	459,368	G→A	D161N (GAT→AAT)	lon →	Lon protease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	459,368	0	G	A	100.0%	387.4 / NA	110	D161N (GAT→AAT)	lon	Lon protease
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (42/68); total (42/68)

Only 100 of 116 total aligned reads displayed.

TCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATC  >  NC_000913/459235‑459503

tCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCgg                                                                                                                                   <  1:506082/140‑1 (MQ=255)

 cTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGgc                                                                                                                                  <  1:1424304/140‑1 (MQ=255)

  tGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGgcg                                                                                                                                 <  2:1364948/140‑1 (MQ=255)

   ggAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGgcgc                                                                                                                                <  2:8691/140‑1 (MQ=255)

     aGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGt                                                                                                                              <  1:948983/140‑1 (MQ=255)

     aGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGt                                                                                                                              <  1:729832/140‑1 (MQ=255)

      gTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTc                                                                                                                             <  2:1144355/140‑1 (MQ=255)

      gTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTc                                                                                                                             >  2:1339862/1‑140 (MQ=255)

      gTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTc                                                                                                                             <  2:29156/140‑1 (MQ=255)

       tCGCCGTCCATTGATGAGCGGGAGCAGGAAG‑GCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTg                                                                                                                           <  2:319344/140‑1 (MQ=255)

       tCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCt                                                                                                                            >  1:975189/1‑140 (MQ=255)

       tCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCt                                                                                                                            <  1:160278/140‑1 (MQ=255)

        cGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTg                                                                                                                           <  2:315733/140‑1 (MQ=255)

         gCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTgg                                                                                                                          >  1:768239/1‑140 (MQ=255)

         gCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTgg                                                                                                                          >  1:1362645/1‑140 (MQ=255)

          ccGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGc                                                                                                                         >  2:258882/1‑140 (MQ=255)

          ccGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGc                                                                                                                         >  1:585238/1‑140 (MQ=255)

          ccGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGc                                                                                                                         >  2:1295760/1‑140 (MQ=255)

           cGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCg                                                                                                                        <  2:184270/140‑1 (MQ=255)

             aCCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAAGCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGa                                                                                                                      <  2:1480847/140‑1 (MQ=255)

                gttGATGCGCGGGATCAGGAAGTGCTGGTGCGTGCTGCAGTCAGCCAGTTCGAAGGCTACGTCTAGGTGATCAAAAAAATCCCTCAGGAAGTGCTGATGTCACTGAATAGCATCGACAATACGTTGCGTCTGGCGGATAc                                                                                                                   <  2:685827/139‑1 (MQ=255)

                aTTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATAc                                                                                                                   <  2:674755/140‑1 (MQ=255)

                 ttGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATAcc                                                                                                                  >  1:394427/1‑140 (MQ=255)

                   gatgaGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCAt                                                                                                                <  1:1379973/140‑1 (MQ=255)

                     tgaGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGGTACCATtg                                                                                                              <  1:1403407/140‑1 (MQ=255)

                      gaGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATtgc                                                                                                             <  1:846990/140‑1 (MQ=255)

                         cGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATtgctgc                                                                                                          >  1:1070767/1‑140 (MQ=255)

                           ggAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGcac                                                                                                        >  2:753076/1‑140 (MQ=255)

                           ggAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGcac                                                                                                        >  2:308570/1‑140 (MQ=255)

                           ggAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGcac                                                                                                        >  1:1451483/1‑140 (MQ=255)

                               cAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACatat                                                                                                    <  2:768239/140‑1 (MQ=255)

                               cAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACatat                                                                                                    <  2:361590/140‑1 (MQ=255)

                                        cTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGaa                                                                                           >  2:1355942/1‑140 (MQ=255)

                                          ggTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAAc                                                                                         >  1:215367/1‑140 (MQ=255)

                                          ggTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGCCTGGCCGATACCATTGCTGCACAGGTGGCGCTGAAAc                                                                                         >  2:861173/1‑140 (MQ=255)

                                           gTGCGTACTGCAATCAGCCAGTGCGAAGGGTACATCAAGCTGACCAAAAAAATCCCACCAGAAGCGCTGACGCCGCTGAATAGCATCGACAATCCGGCGCGTCGGGCGGATTCCATAGCTGGAGATATGCCGCTGAAACt                                                                                        <  2:100390/140‑1 (MQ=255)

                                            tGCGTACTGCAATCAGCCAGTTCGAGGGCTACATCAAGCTGAACAAAAAAATCCTACCAGAAGTGCTGACGTAGCTGACTAGCATCGACAATACAGCGCGCCTGGCGGATACCATTGCTGCACATATGCCGCCGTAACTg                                                                                       >  2:1379805/1‑140 (MQ=255)

                                             gCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTgg                                                                                      <  2:24192/140‑1 (MQ=255)

                                                tACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTg                                                                                   >  2:239801/1‑140 (MQ=255)

                                                tACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTg                                                                                   >  2:2943/1‑140 (MQ=255)

                                                tACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTg                                                                                   >  1:58862/1‑140 (MQ=255)

                                                tACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTg                                                                                   >  2:396009/1‑140 (MQ=255)

                                                     cAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACaaa                                                                              >  2:1477481/1‑140 (MQ=255)

                                                      aaTCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAAc                                                                             <  1:183000/140‑1 (MQ=255)

                                                       aTCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACa                                                                            <  2:720/140‑1 (MQ=255)

                                                         cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                          <  2:928330/140‑1 (MQ=255)

                                                         cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                          <  2:762635/140‑1 (MQ=255)

                                                         cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                          <  2:160403/140‑1 (MQ=255)

                                                         cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                          <  2:585238/140‑1 (MQ=255)

                                                         cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                          <  2:388641/140‑1 (MQ=255)

                                                         cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                          <  2:584628/140‑1 (MQ=255)

                                                         cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                          <  1:258882/140‑1 (MQ=255)

                                                         cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                          <  2:1140694/140‑1 (MQ=255)

                                                         cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                          <  2:1127221/140‑1 (MQ=255)

                                                         cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                          <  1:1202026/140‑1 (MQ=255)

                                                         cAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGt                                                                          <  1:1207048/140‑1 (MQ=255)

                                                          aGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTc                                                                         >  1:513377/1‑140 (MQ=255)

                                                            ccAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTg                                                                       >  1:1497592/1‑140 (MQ=255)

                                                             cAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGt                                                                      >  1:763462/1‑140 (MQ=255)

                                                                ttCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCt                                                                   >  2:846877/1‑140 (MQ=255)

                                                                    aaGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGgag                                                               <  1:658041/140‑1 (MQ=255)

                                                                    aaGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGgag                                                               <  2:394427/140‑1 (MQ=255)

                                                                         tACATCAAGCTGAACAAAAAAATCCCGCCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTc                                                          <  1:861173/140‑1 (MQ=255)

                                                                         tACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTc                                                          <  1:753076/140‑1 (MQ=255)

                                                                          aCATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTcc                                                         >  1:1290849/1‑140 (MQ=255)

                                                                           cATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCg                                                        <  1:1389497/140‑1 (MQ=255)

                                                                                aGCTGAACAAAAAAATCCCACCAGAAGAGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGTCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACTGTCTGTTCTCGAGACGTCCGACGtt                                                   >  2:102670/1‑140 (MQ=255)

                                                                                 gCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATTCCGCTGAAACTGGCTGACAAACAGCCTGTTCTGGAGATGTCCGACGTTa                                                  >  2:1522214/1‑140 (MQ=255)

                                                                                 gCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTa                                                  >  1:742159/1‑140 (MQ=255)

                                                                                 gCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTa                                                  >  2:799945/1‑140 (MQ=255)

                                                                                 gCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTa                                                  >  1:570585/1‑140 (MQ=255)

                                                                                    gAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacg                                               <  1:37779/140‑1 (MQ=255)

                                                                                    gAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacg                                               <  1:308570/140‑1 (MQ=255)

                                                                                    gAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacg                                               <  1:1231554/140‑1 (MQ=255)

                                                                                    gAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacg                                               <  2:267722/140‑1 (MQ=255)

                                                                                    gAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacg                                               <  1:1019189/140‑1 (MQ=255)

                                                                                     aaCAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGTCGGATGCCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCGCTACTGGAGATGTCCGACGTTaacga                                              <  2:1235793/140‑1 (MQ=255)

                                                                                     aaCAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacga                                              <  1:689767/140‑1 (MQ=255)

                                                                                     aaCAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacga                                              >  1:887809/1‑140 (MQ=255)

                                                                                     aaCAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacga                                              >  2:746772/1‑140 (MQ=255)

                                                                                       cAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTaacgaac                                            >  1:290694/1‑140 (MQ=255)

                                                                                          aaaaaTCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTc                                         <  2:570585/140‑1 (MQ=255)

                                                                                          aaaaaTCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTc                                         <  2:1292028/140‑1 (MQ=255)

                                                                                              aTCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGa                                     <  2:147107/140‑1 (MQ=255)

                                                                                                  caccaGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAatat                                 <  2:153707/140‑1 (MQ=255)

                                                                                                   accaGAAGTGCTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATc                                <  2:215367/140‑1 (MQ=255)

                                                                                                             cTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAat                      >  1:1294654/1‑140 (MQ=255)

                                                                                                             cTGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAat                      >  1:1391873/1‑140 (MQ=255)

                                                                                                              tGACGTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAatg                     <  2:1290849/140‑1 (MQ=255)

                                                                                                                  gTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATgg                 >  2:426864/1‑140 (MQ=255)

                                                                                                                  gTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATgg                 >  2:330927/1‑140 (MQ=255)

                                                                                                                  gTCGCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATgg                 >  1:812006/1‑140 (MQ=255)

                                                                                                                     gCTGAATAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAAt              <  1:396098/140‑1 (MQ=255)

                                                                                                                      cTGAGTAGCATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATc             <  2:862839/140‑1 (MQ=255)

                                                                                                                              cATCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCg     <  1:1499141/140‑1 (MQ=255)

                                                                                                                               aTCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGa    <  2:1070767/140‑1 (MQ=255)

                                                                                                                                tCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGAt   >  2:1108175/1‑140 (MQ=255)

                                                                                                                                tCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGAt   <  2:887809/140‑1 (MQ=255)

                                                                                                                                tCGACAATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGAt   <  2:125933/140‑1 (MQ=255)

                                                                                                                                 cgacaaTCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATc  >  2:529297/1‑140 (MQ=255)

TCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATC  >  NC_000913/459235‑459503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`