Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,136,798	G→A	L175L (TTG→TTA)	flgI →	flagellar P‑ring protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,136,798	0	G	A	100.0%	333.8 / NA	99	L175L (TTG→TTA)	flgI	flagellar P‑ring protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (56/43);  total (56/43)

AGTCAGGTGTATGCGCTGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTGCCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGCGCGGACT  >  NC_000913/1136664‑1136933                                                                                                                                       |                                                                                                                                        aGTCAGGTGTATGCGCTGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGTAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACccag                                                                                                                                    <  2:988426/140‑1 (MQ=255)    cAGGTGTATGCGCTGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACG‑GAATTACccagccag                                                                                                                                >  1:925186/1‑140 (MQ=255)      ggTGTATGCGCTGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGt                                                                                                                               >  1:920280/1‑140 (MQ=255)      ggTGTATGCGCTGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGt                                                                                                                               <  1:552214/140‑1 (MQ=255)          tATGCGCTGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTgg                                                                                                                           >  2:1327095/1‑140 (MQ=255)          tATGCGCTGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTgg                                                                                                                           >  1:1121793/1‑140 (MQ=255)             gcgcTGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGt                                                                                                                        >  1:308687/1‑140 (MQ=255)             gcgcTGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGt                                                                                                                        <  1:169394/140‑1 (MQ=255)             gcgcTGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGt                                                                                                                        >  2:579498/1‑140 (MQ=255)               gcTGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCg                                                                                                                      <  1:1531846/140‑1 (MQ=255)               gcTGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCg                                                                                                                      >  2:560831/1‑140 (MQ=255)                 tGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCggg                                                                                                                    >  2:794772/1‑140 (MQ=255)                 tGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCggg                                                                                                                    >  2:592514/1‑140 (MQ=255)                 tGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCggg                                                                                                                    >  1:1436064/1‑140 (MQ=255)                  ggCGCAGGGCAATATTATGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGa                                                                                                                   <  1:143407/140‑1 (MQ=255)                   gcgcAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGaa                                                                                                                  <  1:186595/140‑1 (MQ=255)                   gcgcAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGaa                                                                                                                  <  1:1183049/140‑1 (MQ=255)                    cgcAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAAt                                                                                                                 >  1:141833/1‑140 (MQ=255)                    cgcAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAAt                                                                                                                 >  2:1512375/1‑140 (MQ=255)                    cgcAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAAt                                                                                                                 <  1:1479613/140‑1 (MQ=255)                          gCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCtt                                                                                                           >  2:1309701/1‑140 (MQ=255)                              tatTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAAtt                                                                                                       >  2:1057586/1‑140 (MQ=255)                                   tGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCCGGCTAACCAACTGTACGGTGGACGGATCACCAATGGCGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGcca                                                                                                  >  1:1524927/1‑138 (MQ=255)                                   tGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCaa                                                                                                  >  1:729399/1‑140 (MQ=255)                                   tGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCaa                                                                                                  >  2:183550/1‑140 (MQ=255)                                   tGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCaa                                                                                                  >  2:982407/1‑140 (MQ=255)                                    ggTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAAc                                                                                                 >  2:1473938/1‑140 (MQ=255)                                        ggcggcGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTaa                                                                                             >  1:611346/1‑140 (MQ=255)                                          cggcgCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAacg                                                                                           >  1:1341928/1‑140 (MQ=255)                                          cggcgCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAacg                                                                                           >  2:550060/1‑140 (MQ=255)                                          cggcgCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAacg                                                                                           >  1:375947/1‑140 (MQ=255)                                          cggcgCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAacg                                                                                           >  2:1047579/1‑140 (MQ=255)                                                         cGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCa                                                                            <  1:1276019/140‑1 (MQ=255)                                                            tGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATgg                                                                         >  1:357997/1‑140 (MQ=255)                                                            tGGCGGCAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATgg                                                                         <  2:1121793/140‑1 (MQ=255)                                                                   aGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCgcagca                                                                  <  1:85081/140‑1 (MQ=255)                                                                    gCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCaa                                                                 <  1:560831/140‑1 (MQ=255)                                                                        tgtTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCg                                                             >  1:1404938/1‑140 (MQ=255)                                                                        tgtTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCg                                                             >  1:1514446/1‑140 (MQ=255)                                                                          ttCAGGGTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGGGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCt                                                           >  2:262191/1‑140 (MQ=255)                                                                           tCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTg                                                          <  1:262191/140‑1 (MQ=255)                                                                           tCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTg                                                          <  2:70159/140‑1 (MQ=255)                                                                            cAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGa                                                         <  2:920280/140‑1 (MQ=255)                                                                             aGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGac                                                        <  1:592514/140‑1 (MQ=255)                                                                             aGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGac                                                        <  2:392512/140‑1 (MQ=255)                                                                             aGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGac                                                        <  2:141833/140‑1 (MQ=255)                                                                             aGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGCTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGac                                                        >  2:279895/1‑140 (MQ=255)                                                                                  aaCCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCAt                                                   >  2:128557/1‑140 (MQ=255)                                                                                  aaCCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCAt                                                   >  2:1114103/1‑140 (MQ=255)                                                                                  aaCCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCAt                                                   >  1:1092938/1‑140 (MQ=255)                                                                                        cTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACcg                                             <  1:794772/140‑1 (MQ=255)                                                                                         tGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACcgc                                            >  1:605433/1‑140 (MQ=255)                                                                                             cGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCgcgtgc                                        <  2:1341928/140‑1 (MQ=255)                                                                                             cGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCgcgtgc                                        <  1:1047579/140‑1 (MQ=255)                                                                                             cGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCgcgtgc                                        <  2:308687/140‑1 (MQ=255)                                                                                             cGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCgcgtgc                                        <  2:196039/140‑1 (MQ=255)                                                                                             cGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCgcgtgc                                        <  1:579498/140‑1 (MQ=255)                                                                                             cGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCgcgtgc                                        <  1:1309701/140‑1 (MQ=255)                                                                                                tGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGcgtgcgtg                                     >  1:316645/1‑140 (MQ=255)                                                                                                  gACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGa                                   >  2:1535312/1‑140 (MQ=255)                                                                                                  gACGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGa                                   >  1:1401560/1‑140 (MQ=255)                                                                                                   aCGGATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGat                                  <  1:1057586/140‑1 (MQ=255)                                                                                                     ggttCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATGCCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGatat                                <  2:1539071/137‑1 (MQ=255)                                                                                                     ggATCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGatat                                >  2:357533/1‑140 (MQ=255)                                                                                                       aTCACCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATgg                              >  1:164169/1‑140 (MQ=255)                                                                                                          aCCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAg                           >  2:895665/1‑140 (MQ=255)                                                                                                          aCCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAg                           >  2:857025/1‑140 (MQ=255)                                                                                                          aCCAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAg                           >  2:853818/1‑140 (MQ=255)                                                                                                            cAATGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAgcg                         >  1:1216075/1‑140 (MQ=255)                                                                                                              aTGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGcc                       <  2:1040197/140‑1 (MQ=255)                                                                                                              aTGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGcc                       <  2:375947/140‑1 (MQ=255)                                                                                                               tGGTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCa                      <  2:842792/140‑1 (MQ=255)                                                                                                                ggTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCAc                     <  1:1473938/140‑1 (MQ=255)                                                                                                                 gTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCAcc                    >  2:171525/1‑140 (MQ=255)                                                                                                                 gTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCAcc                    >  1:1007317/1‑140 (MQ=255)                                                                                                                 gTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCAcc                    >  2:1153527/1‑140 (MQ=255)                                                                                                                 gTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCAcc                    >  1:848466/1‑140 (MQ=255)                                                                                                                 gTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCAcc                    >  2:257248/1‑140 (MQ=255)                                                                                                                 gTGCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCAcc                    >  2:220172/1‑140 (MQ=255)                                                                                                                   gCGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACcgc                  >  2:317569/1‑140 (MQ=255)                                                                                                                    cGGTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACcgcg                 >  1:557825/1‑140 (MQ=255)                                                                                                                      gTTATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGtt               >  2:753613/1‑140 (MQ=255)                                                                                                                        tATTGAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAg             >  1:1447020/1‑140 (MQ=255)                                                                                                                            gAACGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATgc         >  1:1511086/1‑140 (MQ=255)                                                                                                                              aCGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCCGCAAATCGCTGACACCATCAACCGCGTGCGTGGGTATGGCAGCGCCCCCGCGTTAGAAgcgc       >  2:257973/1‑140 (MQ=255)                                                                                                                               cGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGcgcg      <  2:67681/140‑1 (MQ=255)                                                                                                                               cGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGcgcg      <  1:1535867/140‑1 (MQ=255)                                                                                                                               cGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGcgcg      <  2:1021395/140‑1 (MQ=255)                                                                                                                               cGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGcgcg      <  2:316645/140‑1 (MQ=255)                                                                                                                               cGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGcgcg      <  1:1327095/140‑1 (MQ=255)                                                                                                                               cGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGcgcg      <  2:611346/140‑1 (MQ=255)                                                                                                                               cGTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGcgcg      <  2:387574/140‑1 (MQ=255)                                                                                                                                gTGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCG‑CACCGCGTTAGATGCGCGGa    <  2:783770/140‑1 (MQ=255)                                                                                                                                 tGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGCGCGGa    <  1:1427586/140‑1 (MQ=255)                                                                                                                                 tGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGCGCGGa    >  2:5298/1‑140 (MQ=255)                                                                                                                                 tGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGCGCGGa    <  2:1401560/140‑1 (MQ=255)                                                                                                                                 tGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGCGCGGa    <  1:982407/140‑1 (MQ=255)                                                                                                                                 tGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGCGCGGa    >  2:430236/1‑140 (MQ=255)                                                                                                                                 tGAATTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGCGCGGa    <  1:550060/140‑1 (MQ=255)                                                                                                                                   aaTTACCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGCGCGGACt  >  1:1336942/1‑140 (MQ=255)                                                                                                                                       |                                                                                                                                        AGTCAGGTGTATGCGCTGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTGCCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGCGCGGACT  >  NC_000913/1136664‑1136933

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑