Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,704,559	T→C	R3R (CGT→CGC)	blr →	beta‑lactam resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,704,559	0	T	C	100.0%	359.9 / NA	95	R3R (CGT→CGC)	blr	beta‑lactam resistance protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (41/54);  total (41/54)

AGCGAATTTTCCAACGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGTCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGC  >  NC_000913/1704423‑1704694                                                                                                                                         |                                                                                                                                        aGCGAATTTTCCAACGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCtt                                                                                                                                      <  1:847401/140‑1 (MQ=255)  gCGAATTTTCCAACGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTa                                                                                                                                     <  2:1368305/140‑1 (MQ=255)   cGAATTTTCCAACGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTAt                                                                                                                                    >  2:191954/1‑140 (MQ=255)   cGAATTTTCCAACGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTAt                                                                                                                                    <  1:823700/140‑1 (MQ=255)   cGAATTTTCCAACGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTAt                                                                                                                                    <  1:827709/140‑1 (MQ=255)    gAATTTTCCAACGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTAtt                                                                                                                                   <  2:1276677/140‑1 (MQ=255)         ttCCAACGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAAtt                                                                                                                              <  1:1386025/140‑1 (MQ=255)          tCCAACGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTa                                                                                                                             <  1:961123/140‑1 (MQ=255)           ccAACGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTaa                                                                                                                            <  2:1388476/140‑1 (MQ=255)           ccAACGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTaa                                                                                                                            <  2:1548044/140‑1 (MQ=255)           ccAACGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTaa                                                                                                                            <  2:1114608/140‑1 (MQ=255)               cGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAgg                                                                                                                        <  1:990986/140‑1 (MQ=255)               cGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAgg                                                                                                                        <  2:895300/140‑1 (MQ=255)               cGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAgg                                                                                                                        >  2:291773/1‑140 (MQ=255)                           aaTATCGCAAAAACCTCAGTAAAAATCTTGCTTGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCt                                                                                                            >  1:1275544/1‑140 (MQ=255)                           aaTATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCt                                                                                                            >  1:929371/1‑140 (MQ=255)                             tatCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTg                                                                                                          >  1:1382675/1‑140 (MQ=255)                              atCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGt                                                                                                         <  2:426508/140‑1 (MQ=255)                                cGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCg                                                                                                       >  1:562347/1‑140 (MQ=255)                                cGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCg                                                                                                       >  1:534780/1‑140 (MQ=255)                                cGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCg                                                                                                       >  2:345478/1‑140 (MQ=255)                                 gCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGt                                                                                                      <  2:923190/140‑1 (MQ=255)                                 gCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGt                                                                                                      <  1:929695/140‑1 (MQ=255)                                 gCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGt                                                                                                      <  1:1277033/140‑1 (MQ=255)                                    aaaaCCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTc                                                                                                   <  1:278534/140‑1 (MQ=255)                                    aaaaCCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTc                                                                                                   <  2:1216487/140‑1 (MQ=255)                                    aaaaCCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTc                                                                                                   <  2:35587/140‑1 (MQ=255)                                    aaaaCCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTc                                                                                                   <  1:1544330/140‑1 (MQ=255)                                     aaaCCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCa                                                                                                  >  2:823810/1‑140 (MQ=255)                                        ccTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTc                                                                                               <  1:1266207/140‑1 (MQ=255)                                        ccTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTc                                                                                               <  1:496626/140‑1 (MQ=255)                                         cTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCa                                                                                              <  1:1283751/140‑1 (MQ=255)                                         cTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCa                                                                                              >  1:609485/1‑140 (MQ=255)                                         cTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCa                                                                                              >  1:1379225/1‑140 (MQ=255)                                          tCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCAt                                                                                             <  1:191954/140‑1 (MQ=255)                                          tCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGCTGGATCGTTCTTGTCGTTTCAGTCAt                                                                                             <  2:1288326/140‑1 (MQ=255)                                                   aTCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTtgg                                                                                    >  1:367581/1‑140 (MQ=255)                                                     cttgcttgAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTtggcg                                                                                  <  2:1275544/140‑1 (MQ=255)                                                         cTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTtggcgtggc                                                                              <  2:1413767/140‑1 (MQ=255)                                                           ggAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGa                                                                            <  2:71894/140‑1 (MQ=255)                                                             aGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGt                                                                          <  1:1124886/140‑1 (MQ=255)                                                              gCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTc                                                                         <  2:732283/140‑1 (MQ=255)                                                                 attattGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTcaca                                                                      <  2:65753/140‑1 (MQ=255)                                                                 attattGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTcaca                                                                      <  1:1222985/140‑1 (MQ=255)                                                                      tGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGAc                                                                 <  1:345478/140‑1 (MQ=255)                                                                      tGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGAc                                                                 <  2:534780/140‑1 (MQ=255)                                                                      tGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGAc                                                                 <  1:971161/140‑1 (MQ=255)                                                                      tGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGAc                                                                 <  2:769991/140‑1 (MQ=255)                                                                        cTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACaa                                                               >  2:279362/1‑140 (MQ=255)                                                                          aaGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCATTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACt                                                             >  2:1301945/1‑140 (MQ=255)                                                                           aGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTa                                                            >  1:1316035/1‑140 (MQ=255)                                                                            gTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTAt                                                           <  2:562347/140‑1 (MQ=255)                                                                            gTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTAt                                                           >  2:678015/1‑140 (MQ=255)                                                                            gTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTCGGCGTGGCGAGTCACATTGACAACTAt                                                           >  2:960952/1‑140 (MQ=255)                                                                              aaCATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCa                                                         <  2:372075/140‑1 (MQ=255)                                                                                cATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGc                                                       >  2:215737/1‑140 (MQ=255)                                                                                     aCCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCt                                                  >  2:1217511/1‑140 (MQ=255)                                                                                     aCCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCt                                                  >  1:1533199/1‑140 (MQ=255)                                                                                     aCCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCt                                                  >  2:203197/1‑140 (MQ=255)                                                                                       ccccTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGa                                                >  1:1060997/1‑140 (MQ=255)                                                                                           tGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACag                                            >  1:1340209/1‑140 (MQ=255)                                                                                           tGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACag                                            >  1:1484721/1‑140 (MQ=255)                                                                                           tGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGGGGCGAGTCACATTGACAACTATCAGCCACCTGAACag                                            >  1:700188/1‑140 (MQ=255)                                                                                            gAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACaga                                           >  2:85848/1‑140 (MQ=255)                                                                                             aaGTTAATGGATCAATCAAGAGATATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACagag                                          <  2:1417086/140‑1 (MQ=255)                                                                                             aaGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACagag                                          <  1:1339904/140‑1 (MQ=255)                                                                                             aaGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACagag                                          <  1:454238/140‑1 (MQ=255)                                                                                             aaGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACagag                                          <  1:314691/140‑1 (MQ=255)                                                                                                  aaTGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCtt                                     <  1:823810/140‑1 (MQ=255)                                                                                                   aTGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTc                                    >  2:796197/1‑140 (MQ=255)                                                                                                     ggATCAATCAAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCgg                                  >  2:177563/1‑140 (MQ=255)                                                                                                       atcaatcaAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTa                                <  1:203197/140‑1 (MQ=255)                                                                                                       atcaatcaAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTa                                >  1:1065370/1‑140 (MQ=255)                                                                                                       atcaatcaAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTa                                <  1:1170857/140‑1 (MQ=255)                                                                                                       atcaatcaAGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTa                                >  1:807351/1‑140 (MQ=255)                                                                                                          aatcaaGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTacaa                             <  2:674338/140‑1 (MQ=255)                                                                                                          aatcaaGAGAGATGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTacaa                             >  1:1329110/1‑140 (MQ=255)                                                                                                                 agagaTGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGt                      <  1:816294/140‑1 (MQ=255)                                                                                                                 agagaTGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGt                      <  1:678015/140‑1 (MQ=255)                                                                                                                  gagaTGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTa                     <  2:929371/140‑1 (MQ=255)                                                                                                                  gagaTGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTa                     <  2:1447316/140‑1 (MQ=255)                                                                                                                    gaTGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAg                   <  1:215737/140‑1 (MQ=255)                                                                                                                    gaTGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAg                   >  1:145373/1‑140 (MQ=255)                                                                                                                    gaTGTGGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAg                   >  1:1352303/1‑140 (MQ=255)                                                                                                                      tgtgGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGct                 >  2:1190513/1‑140 (MQ=255)                                                                                                                      tgtgGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGct                 >  2:927394/1‑140 (MQ=255)                                                                                                                      tgtgGGCTGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGct                 >  2:1220210/1‑140 (MQ=255)                                                                                                                             tGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACt          >  2:1536056/1‑140 (MQ=255)                                                                                                                             tGTAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACt          >  2:867389/1‑140 (MQ=255)                                                                                                                               tAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTtg        >  1:375170/1‑140 (MQ=255)                                                                                                                               tAATGAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTtg        >  1:290734/1‑140 (MQ=255)                                                                                                                                   gAATCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGa    <  2:1484721/140‑1 (MQ=255)                                                                                                                                     aTCGCCTTATTGAATTAACAGGTTTGATCGTTCTTTACGAATCAGTCATTCTTCTTGTCGTGGCGAGTCGCATTGACAACTATCAGCCACCTGAACAGAGTGCTTCAGTTCAAAACATGTAAGCTCTGCACTTGTGGAgt  <  2:1362548/140‑2 (MQ=255)                                                                                                                                     aTCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGc  >  2:791981/1‑140 (MQ=255)                                                                                                                                     aTCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGc  <  1:646982/140‑1 (MQ=255)                                                                                                                                     aTCGCCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGc  <  2:877345/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                        AGCGAATTTTCCAACGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGTCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGC  >  NC_000913/1704423‑1704694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑