| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,227,441 | A→G | pseudogene (1318/1436 nt) | mdtQ ← | putative multidrug resistance outer membrane protein MdtQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,227,441 | 0 | A | G | 98.9% | 320.5 / ‑4.7 | 90 | pseudogene (1318/1436 nt) | mdtQ | putative multidrug resistance outer membrane protein MdtQ |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (62/27); total (63/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.58e-01 | |||||||||||
GAAGGCGCATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAGTGTCTGAACCTGACTGGCTGCCCGCGCCA > NC_000913/2227309‑2227576 | gAAGGCGCATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGa > 1:500247/1‑140 (MQ=255)gAAGGCGCATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGa < 2:397897/140‑1 (MQ=255) aaGGCGCATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGaa > 2:321814/1‑140 (MQ=255) gcgcATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAGTGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCa > 1:1194842/1‑140 (MQ=255) gcgcATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCTTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCa < 1:1472677/140‑1 (MQ=255) gcgcATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCa > 1:791671/1‑140 (MQ=255) gcgcATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCa > 2:200141/1‑140 (MQ=255) gcgcATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCa > 1:480052/1‑140 (MQ=255) gcgcATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCC‑GCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAg < 1:174440/140‑1 (MQ=255) cgcATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAg > 1:1313373/1‑140 (MQ=255) cgcATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAg > 1:424194/1‑140 (MQ=255) cgcATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAg > 2:1091693/1‑140 (MQ=255) gcATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGc > 2:907059/1‑140 (MQ=255) gcATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGc > 1:1324626/1‑140 (MQ=255) gcATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGc > 1:940405/1‑140 (MQ=255) gcATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGc > 2:462148/1‑140 (MQ=255) gcATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGc > 2:1115941/1‑140 (MQ=255) cATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCa > 1:1529882/1‑140 (MQ=255) atatCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCaa > 1:457596/1‑140 (MQ=255) atcatcAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAatg < 2:1220869/140‑1 (MQ=255) tttGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGt > 2:461358/1‑140 (MQ=255) tttGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGt > 2:1168231/1‑140 (MQ=255) tGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTa > 2:1523543/1‑140 (MQ=255) tGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTa > 1:1103680/1‑140 (MQ=255) aCCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAg < 1:1382492/140‑1 (MQ=255) ccccGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAgcgc > 2:11462/1‑140 (MQ=255) cccGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAgcgcg > 2:163378/1‑140 (MQ=255) ccGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAgcgcgc < 1:854388/140‑1 (MQ=255) ccGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAgcgcgc < 2:400711/140‑1 (MQ=255) ccGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAgcgcgc < 2:480052/140‑1 (MQ=255) cGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGcc > 1:1446685/1‑140 (MQ=255) cGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGcc > 1:95710/1‑140 (MQ=255) cGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGcc > 2:1541807/1‑140 (MQ=255) cGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGcc > 1:347044/1‑140 (MQ=255) aaCGCACCAGTGAGTTGAATGGAGGCATCCAGCCCCTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTgcgc < 1:1549175/140‑1 (MQ=255) cGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCaa < 1:1052812/140‑1 (MQ=255) cACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGa > 1:1129468/1‑140 (MQ=255) tGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTAcc < 2:940405/140‑1 (MQ=255) aGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACcac < 2:1274615/140‑1 (MQ=255) gTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACcaca > 2:337136/1‑140 (MQ=255) tGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACg > 1:335672/1‑140 (MQ=255) aaTGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCa > 2:1265377/1‑140 (MQ=255) aaTGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCa > 2:217214/1‑140 (MQ=255) aaTGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCa > 2:624466/1‑140 (MQ=255) tGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAg > 2:656427/1‑140 (MQ=255) tGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAg < 2:1324626/140‑1 (MQ=255) gCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGTGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATc < 2:1423692/140‑1 (MQ=255) gCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATc > 1:1361628/1‑140 (MQ=255) tCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATcgcg > 2:1280881/1‑140 (MQ=255) tCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATcgcg > 2:583629/1‑140 (MQ=255) tCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATcgcg < 2:580417/140‑1 (MQ=255) tCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATcgcg > 2:491280/1‑140 (MQ=255) tCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATcgcg > 1:1358651/1‑140 (MQ=255) tCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATcgcg < 1:907059/140‑1 (MQ=255) tCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATcgcg > 2:676611/1‑140 (MQ=255) gCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTgc > 1:761973/1‑140 (MQ=255) cccTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTgcg > 1:677920/1‑140 (MQ=255) cccTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTgcg > 2:1202187/1‑140 (MQ=255) gCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGa > 2:20862/1‑140 (MQ=255) cAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGAt < 2:424194/140‑1 (MQ=255) aaCAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTg > 1:1250535/1‑140 (MQ=255) aCAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTgg > 1:638810/1‑140 (MQ=255) ggCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGttt < 1:163378/140‑1 (MQ=255) ggCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGttt > 1:209939/1‑140 (MQ=255) ggCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGttt < 1:1523543/140‑1 (MQ=255) gCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGtttt > 2:108455/1‑140 (MQ=255) gCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGtttt > 1:797813/1‑140 (MQ=255) gCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGtttt > 2:850180/1‑140 (MQ=255) gCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGtttt > 1:301675/1‑140 (MQ=255) gCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGtttt > 1:1490847/1‑140 (MQ=255) gCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGtttt > 2:750722/1‑140 (MQ=255) ccATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGttttt > 1:1417070/1‑140 (MQ=255) cccGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGcc < 1:1091693/140‑1 (MQ=255) ccGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCACTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCa < 1:321814/140‑1 (MQ=255) cGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAg > 2:947591/1‑140 (MQ=255) cTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAgtg > 2:1461676/1‑140 (MQ=255) cTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAgtg > 2:1260228/1‑140 (MQ=255) cTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAgtg > 2:904693/1‑140 (MQ=255) cTCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAggg > 2:1531048/1‑138 (MQ=255) tCACGCAGCGCGGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAgtgt < 1:656427/140‑1 (MQ=255) cgcgGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAGTGTCTGAACCt > 2:558028/1‑140 (MQ=255) cgcgGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAGTGTCTGAACCt > 1:439522/1‑140 (MQ=255) cgcgGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAGTGTCTGAACCt < 1:1541807/140‑1 (MQ=255) cgGGGATTCTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAGTGTCTGAACCTGa > 2:1188236/1‑140 (MQ=255) cTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAGTGTCTGAACCTGACTGGCTGc > 2:738033/1‑140 (MQ=255) cTGGCTTCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAGTGTCTGAACCTGACTGGCTGc < 1:1265377/140‑1 (MQ=255) cTGGCTTCGCTGACGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAGTGTCTGAACCTGACTGGCTGc > 1:1080641/1‑140 (MQ=255) ttCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAGTGTCTGAACCTGACTGGCTGCCcgcg < 2:600084/140‑1 (MQ=255) ttCGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAGTGTCTGAACCTGACTGGCTGCCcgcg < 1:1115941/140‑1 (MQ=255) cGCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAGTGTCTGAACCTGACTGGCTGCCCGCGcc < 1:1280881/140‑1 (MQ=255) gCTGGCGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAGTGTCTGAACCTGACTGGCTGCCCGCGCCa < 2:761973/140‑1 (MQ=255) | GAAGGCGCATATCATCAGCGTTTGTACCCCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGATTCTGGCTTCGCTGACGCGGGAACCAGCAATGATGCCCGCGTTAAAGCGCGCCTGCGCAAGACCTACCACACGCAAGGCATCGCGCTCAATTTGCGCCTGATGCTGGTTTTTCTCCGCCAGTGTCTGAACCTGACTGGCTGCCCGCGCCA > NC_000913/2227309‑2227576 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |