| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,045,986 | Δ1 bp | intergenic (‑85/+182) | ygfF ← / ← gcvP | putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/glycine decarboxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,045,983 | 0 | T | . | 98.9% | 408.5 / ‑1.8 | 94 | intergenic (‑82/+185) | ygfF/gcvP | putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/glycine decarboxylase |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base . (34/59); total (34/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.91e-01 | |||||||||||
GTTGCCCGCCCGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGCTTTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCAT > NC_000913/3045852‑3046117 | gTTGCCCGCCCGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAATAAACTGGCTCAATCTTCAATGTTGGCACGCTTTCcccct < 1:976967/140‑2 (MQ=255) ttGCCCGCCCGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTc > 1:1156073/1‑140 (MQ=255) ttGCCCGCCCGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTc > 2:681002/1‑140 (MQ=255) tGCCCGCCCGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCg < 2:1567033/140‑1 (MQ=255) tGCCCGCCCGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCg < 1:899520/140‑1 (MQ=255) tGCCCGCCCGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCg < 1:1136815/140‑1 (MQ=255) tGCCCGCCCGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCg < 2:812747/140‑1 (MQ=255) tGCCCGCCCGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCg < 2:114340/140‑1 (MQ=255) tGCCCGCCCGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCg < 2:454048/140‑1 (MQ=255) gcccgcccGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGc > 2:897341/1‑140 (MQ=255) gcccgcccGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGc > 2:1538563/1‑140 (MQ=255) gcccgcccGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGc > 1:353134/1‑140 (MQ=255) gcccgcccGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGc > 2:148871/1‑140 (MQ=255) gcccgcccGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGc > 2:1443039/1‑140 (MQ=255) gcccgcccGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGc > 1:747062/1‑140 (MQ=255) gcccgcccGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGc > 1:1199782/1‑140 (MQ=255) gcccgcccGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGCTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGc > 2:28792/1‑140 (MQ=255) cccgcccgATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGcc < 2:1391467/140‑1 (MQ=255) cccgcccgATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGcc < 1:2403/140‑1 (MQ=255) cccgcccgATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGcc < 1:270564/140‑1 (MQ=255) cccgcccgATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGACTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGcc < 2:402783/140‑1 (MQ=255) cgcccgCTGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCt < 2:1146082/140‑1 (MQ=255) ccgATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTc < 1:428899/140‑1 (MQ=255) gCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCTCGC‑TTTCCCCCTCGCCCTTTCAGGga < 1:828958/140‑1 (MQ=255) gCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGga < 1:518522/140‑1 (MQ=255) aCTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGc < 1:88145/140‑1 (MQ=255) cTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGcc < 1:1187000/140‑1 (MQ=255) gCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCgg > 2:1330983/1‑140 (MQ=255) gCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCgg > 1:770780/1‑140 (MQ=255) ccaccaGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCggg < 1:795399/140‑1 (MQ=255) cccaGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGt < 2:54515/139‑1 (MQ=255) tCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAggg < 1:85789/140‑1 (MQ=255) acaAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTa > 2:258343/1‑140 (MQ=255) aaGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGACACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTaaa > 1:817592/1‑140 (MQ=255) gCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATAtt < 1:1438158/140‑1 (MQ=255) cTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTc > 1:1531564/1‑140 (MQ=255) cTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTc > 2:499757/1‑140 (MQ=255) tataGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTcg > 2:163079/1‑140 (MQ=255) taGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTcgcg > 1:1408685/1‑140 (MQ=255) aGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCgcgc < 1:1354399/140‑1 (MQ=255) gCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGcc > 2:199200/1‑140 (MQ=255) aTTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGt > 1:759559/1‑140 (MQ=255) aTTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGt > 1:1197229/1‑140 (MQ=255) aTTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGt > 2:1448694/1‑140 (MQ=255) tGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGcc > 1:1131874/1‑140 (MQ=255) gTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCg < 1:258343/140‑1 (MQ=255) ttttCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGc < 1:1069127/140‑1 (MQ=255) tCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTg < 1:597786/140‑1 (MQ=255) ccGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGt < 1:1538563/140‑1 (MQ=255) gagaAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTc > 2:1352827/1‑140 (MQ=255) aaaaaTTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTcccc < 1:681002/140‑1 (MQ=255) aaaaTTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCt < 1:163079/140‑1 (MQ=255) aaaaTTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCt < 1:28792/140‑1 (MQ=255) aaaaTTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCt < 1:55908/140‑1 (MQ=255) aaaaTTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCt < 1:698181/140‑1 (MQ=255) ttaattCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAcc < 1:695241/140‑1 (MQ=255) cGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAAcc < 1:870093/140‑1 (MQ=255) cGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAAGGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAAcc < 2:466040/140‑1 (MQ=255) ttGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCGCGC‑TCTCCCTCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCTCCC‑TAAcccg < 2:1250144/140‑2 (MQ=255) ttGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCct < 2:775073/140‑1 (MQ=255) ttGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCct < 1:1443039/140‑1 (MQ=255) ttGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCct < 2:17420/140‑1 (MQ=255) ttGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCct < 1:1352827/140‑1 (MQ=255) aTCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCa < 2:1156073/140‑1 (MQ=255) cTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCaaa < 2:219835/140‑1 (MQ=255) cTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCaaa < 1:873679/140‑1 (MQ=255) ttGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAgg < 1:199200/140‑1 (MQ=255) ttGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAgg < 1:148871/140‑1 (MQ=255) gagaTTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAgggg > 2:460558/1‑140 (MQ=255) gaTTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCg < 2:1131874/140‑1 (MQ=255) gaTTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCg < 2:1408685/140‑1 (MQ=255) aTTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGa < 1:885883/140‑1 (MQ=255) ttGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAg < 2:1328498/140‑1 (MQ=255) tGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAgg > 1:581017/1‑140 (MQ=255) gCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAggg > 1:1391780/1‑140 (MQ=255) gCTAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAggg > 2:1140956/1‑140 (MQ=255) tAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGa < 1:1448694/140‑1 (MQ=255) tAACAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGa < 2:1181272/140‑1 (MQ=255) aaCAAACTGGCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGAc < 2:666520/140‑1 (MQ=255) ggCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAg < 2:1199782/140‑1 (MQ=255) ggCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAg < 1:991630/140‑1 (MQ=255) ggCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAg < 1:971143/140‑1 (MQ=255) ggCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAg > 1:965924/1‑140 (MQ=255) ggCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAg < 1:919493/140‑1 (MQ=255) ggCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAg < 2:747062/140‑1 (MQ=255) ggCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAg > 2:567461/1‑140 (MQ=255) ggCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAg < 1:255306/140‑1 (MQ=255) ggCTCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATACTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAg < 1:328108/140‑1 (MQ=255) tCAATCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCAc > 2:496441/1‑140 (MQ=255) ccAATCTTCAATGGTGGC‑CCCGTTTCCCCCCCCCCCTTTCCGGGGGGGGGGCGGGGGGGGGGTAAAATTTCGCCCCAGTGCCCGCCTGGTCCCCTCCCCCTTACCCCCCCCCCCAAGGGGGCGAGGGGACTGTCTGAGCa < 2:353134/139‑1 (MQ=255) aaTCTTCAATGTTGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAATGGGCGAGGGGACTGTCTGAGCACtt > 1:1039920/1‑140 (MQ=255) tGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCTCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTc > 2:1239630/1‑140 (MQ=255) tGGCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTc < 1:823580/140‑1 (MQ=255) ggCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCa > 2:599071/1‑140 (MQ=255) ggCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCa < 1:386657/140‑1 (MQ=255) gCACGC‑TTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCAt < 1:1416415/140‑1 (MQ=255) | GTTGCCCGCCCGATGCCGCGACTGCCACCAGTCACAAGTGCTATAGCCATTTGTTTTTCCGAGAAAAATTAATTCGTTGACGTATCTTTGAGATTGCTAACAAACTGGCTCAATCTTCAATGTTGGCACGCTTTTCCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACTGTCTGAGCACTTTTGTACTTTGTCAT > NC_000913/3045852‑3046117 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |