Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3455386	3455625	240	34 [29]	[28] 30	[gspA]–[gspC]	[gspA],[gspC]

AATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATCAACCAACAAACGCATTTCAGTCTGATTTCAGCCTTGC  >  NC_000913/3455487‑3455765                                                                                                                                            |                                                                                                                                            aatTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGAtg                                                                                                                                             <  1:185441/140‑1 (MQ=255)                  gCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTg                                                                                                                            >  2:1191485/1‑140 (MQ=255)                     aGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGAtt                                                                                                                         >  2:1291370/1‑140 (MQ=255)                       cGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATtat                                                                                                                       >  2:241586/1‑140 (MQ=255)                                 aCTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGc                                                                                                             <  1:1182894/140‑1 (MQ=255)                                          aCTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCg                                                                                                    >  1:732379/1‑140 (MQ=255)                                             aaCGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGatt                                                                                                 >  1:1513608/1‑140 (MQ=255)                                               cGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGattat                                                                                               >  2:904778/1‑140 (MQ=255)                                               cGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGattat                                                                                               >  2:261126/1‑140 (MQ=255)                                                       taCAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAAtg                                                                                       <  1:1191485/140‑1 (MQ=255)                                                            cccacccaATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAat                                                                                  >  1:991052/1‑140 (MQ=255)                                                            cccacccaATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAat                                                                                  >  2:1427160/1‑140 (MQ=255)                                                            cccacccaATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAat                                                                                  >  2:209649/1‑140 (MQ=255)                                                               acccaATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAattat                                                                               >  1:206870/1‑140 (MQ=255)                                                                               taGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAg                                                               >  2:564157/1‑140 (MQ=255)                                                                                   acatacatCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTaa                                                           >  2:1101724/1‑140 (MQ=255)                                                                                          tCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGa                                                    <  2:1513608/140‑1 (MQ=255)                                                                                          tCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGa                                                    <  1:241586/140‑1 (MQ=255)                                                                                           cGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGAc                                                   >  1:191366/1‑140 (MQ=255)                                                                                               cccACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGAt                                               >  2:436869/1‑140 (MQ=255)                                                                                                     cTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTaa                                         >  1:643417/1‑140 (MQ=255)                                                                                                       aCGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATc                                       <  2:206870/140‑1 (MQ=255)                                                                                                            tCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATcaacca                                  >  1:262899/1‑140 (MQ=255)                                                                                                             ccccTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATcaaccaa                                 >  2:221654/1‑140 (MQ=255)                                                                                                               ccTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATCAACcaaca                               >  2:468352/1‑140 (MQ=255)                                                                                                               ccTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATCAACcaaca                               >  2:930302/1‑140 (MQ=255)                                                                                                                  tCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATCAACCAACAAAc                            >  1:952715/1‑140 (MQ=255)                                                                                                                                          aTGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATCAACCAACAAACGCATTTCAGTCTGATTTCAGCCtt    >  1:734503/1‑140 (MQ=255)                                                                                                                                            gctgcCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATCAACCAACAAACGCATTTCAGTCTGATTTCAGCCTTGc  >  2:805657/1‑140 (MQ=255)                                                                                                                                            gctgcCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATCAACCAACAAACGCATTTCAGTCTGATTTCAGCCTTGc  <  2:991052/140‑1 (MQ=255)                                                                                                                                            |                                                                                                                                            AATTTTGCTTGATTCATGCAAGCGGCATTAATACTATTTATACTAACGTCAATATACAACCCACCCAATCTATTTTATTAGAACATACATCGTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATCAACCAACAAACGCATTTCAGTCTGATTTCAGCCTTGC  >  NC_000913/3455487‑3455765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑