BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,464,564	G→A	A49V (GCC→GTC)	treC ←	trehalose‑6‑phosphate hydrolase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,464,564	0	G	A	100.0%	394.9 / NA	112	A49V (GCC→GTC)	treC	trehalose‑6‑phosphate hydrolase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (41/71); total (41/71)

Only 100 of 113 total aligned reads displayed.

CCCGCGCGATTTTGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGGCATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTGGGGAAG  >  NC_000913/4464428‑4464700

cccGCGCGATTTTGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGCTAGCCAGATGACAt                                                                                                                                       >  1:1289390/1‑140 (MQ=255)

 ccGCGCGATTTTGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATc                                                                                                                                      <  1:157082/140‑1 (MQ=255)

 ccGCGCGATTTTGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATc                                                                                                                                      >  1:1007658/1‑140 (MQ=255)

   gcgcgATTTTGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCaa                                                                                                                                    >  1:214945/1‑140 (MQ=255)

   gcgcgATTTTGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCaa                                                                                                                                    >  2:451616/1‑140 (MQ=255)

    cgcgATTTTGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAAc                                                                                                                                   >  1:609511/1‑140 (MQ=255)

    cgcgATTTTGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAAc                                                                                                                                   >  2:605267/1‑140 (MQ=255)

    cgcgATTTTGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAAc                                                                                                                                   >  2:1465879/1‑140 (MQ=255)

    cgcgATTTTGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAAc                                                                                                                                   >  2:955290/1‑140 (MQ=255)

      cgATTTTGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGc                                                                                                                                 >  1:1146697/1‑140 (MQ=255)

      cgATTTTGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGc                                                                                                                                 <  1:364865/140‑1 (MQ=255)

      cgATTTTGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGc                                                                                                                                 <  2:1033952/140‑1 (MQ=255)

        aTTTTGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGccc                                                                                                                               <  2:344992/140‑1 (MQ=255)

          tttGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAg                                                                                                                             <  2:388788/140‑1 (MQ=255)

           ttGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGt                                                                                                                            <  1:1194306/140‑1 (MQ=255)

              ccTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTa                                                                                                                         <  2:10902/140‑1 (MQ=255)

                 gCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGc                                                                                                                      <  2:1289390/140‑1 (MQ=255)

                  cGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCa                                                                                                                     <  2:242721/140‑1 (MQ=255)

                    tCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGATCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGa                                                                                                                   <  2:1191465/140‑1 (MQ=255)

                    tCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGa                                                                                                                   <  1:939761/140‑1 (MQ=255)

                    tCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGa                                                                                                                   <  2:386821/140‑1 (MQ=255)

                    tCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGa                                                                                                                   <  1:1551912/140‑1 (MQ=255)

                    tCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGa                                                                                                                   <  2:1227206/140‑1 (MQ=255)

                    tCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGa                                                                                                                   <  1:1219264/140‑1 (MQ=255)

                    tCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGa                                                                                                                   <  2:1192877/140‑1 (MQ=255)

                    tCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGa                                                                                                                   <  2:70324/140‑1 (MQ=255)

                     cACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGAt                                                                                                                  <  2:1008205/140‑1 (MQ=255)

                        cAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGt                                                                                                               <  1:1485210/140‑1 (MQ=255)

                          gTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTcc                                                                                                             <  2:1339812/140‑1 (MQ=255)

                          gTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTcc                                                                                                             <  2:1235606/140‑1 (MQ=255)

                          gTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTcc                                                                                                             <  1:515365/140‑1 (MQ=255)

                          gTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTcc                                                                                                             <  2:214945/140‑1 (MQ=255)

                            tCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAg                                                                                                           <  1:153167/140‑1 (MQ=255)

                             cGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAgg                                                                                                          <  1:1215719/140‑1 (MQ=255)

                               tCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGgtg                                                                                                        <  1:605267/140‑1 (MQ=255)

                                                 ccGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTaa                                                                                      <  1:306370/140‑1 (MQ=255)

                                                      ggTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGc                                                                                 <  2:881732/140‑1 (MQ=255)

                                                        tGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCg                                                                               <  2:303078/140‑1 (MQ=255)

                                                            aTCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTAc                                                                           >  1:1046092/1‑140 (MQ=255)

                                                            aTCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTAc                                                                           >  1:490865/1‑140 (MQ=255)

                                                            aTCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTAc                                                                           >  1:1162299/1‑140 (MQ=255)

                                                            aTCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTAc                                                                           >  1:43366/1‑140 (MQ=255)

                                                                aTCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCTACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCt                                                                       >  1:329308/1‑140 (MQ=255)

                                                                aTCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATGGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCt                                                                       >  2:694771/1‑140 (MQ=255)

                                                                aTCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCt                                                                       >  1:437177/1‑140 (MQ=255)

                                                                 tCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTa                                                                      >  2:1227269/1‑140 (MQ=255)

                                                                 tCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTa                                                                      <  2:1365187/140‑1 (MQ=255)

                                                                 tCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTa                                                                      >  2:1092885/1‑140 (MQ=255)

                                                                       tataGTTGGCTTCGTCGTAACTGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATCACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCCCGTAAATCGCCGGTACCGCTACCCgtg                                                                <  2:389117/140‑1 (MQ=255)

                                                                       tataGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCgtg                                                                <  2:1040792/140‑1 (MQ=255)

                                                                       tataGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCgtg                                                                >  2:1219375/1‑140 (MQ=255)

                                                                       tataGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCgtg                                                                <  2:1007658/140‑1 (MQ=255)

                                                                       tataGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCgtg                                                                <  1:477299/140‑1 (MQ=255)

                                                                         taGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCgtggt                                                              <  1:1380513/140‑1 (MQ=255)

                                                                              cGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCt                                                         >  2:1388269/1‑140 (MQ=255)

                                                                              cGCTACGTCGAAACCGTTATCGGCCTGGGTAGATACATAACAGGGGGCTAGCCAGATGACAGCAACGCCGAGTTTAAGCAGATAGTCCAGGAGTTGGATAACGCCACGTAAATCGCCGGTACCGCTTCCCGTGGTGGCCt                                                         >  2:872312/1‑140 (MQ=255)

                                                                                 tACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGaa                                                      <  2:1234844/140‑1 (MQ=255)

                                                                                   cgtcgtAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGaaaa                                                    >  1:641197/1‑140 (MQ=255)

                                                                                   cgtcgtAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGaaaa                                                    >  2:8661/1‑140 (MQ=255)

                                                                                   cgtcgtAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGaaaa                                                    >  1:1343960/1‑140 (MQ=255)

                                                                                     tcgtAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAAct                                                  >  1:445011/1‑140 (MQ=255)

                                                                                       gtAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAActct                                                <  2:322981/140‑1 (MQ=255)

                                                                                       gtAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAActct                                                <  1:451616/140‑1 (MQ=255)

                                                                                        tAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCtt                                               >  2:956884/1‑140 (MQ=255)

                                                                                         aaCCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCttt                                              >  1:940895/1‑140 (MQ=255)

                                                                                           ccGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTgg                                            <  2:843823/140‑1 (MQ=255)

                                                                                            cGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGa                                           <  2:98050/140‑1 (MQ=255)

                                                                                             gTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGAt                                          <  1:766394/140‑1 (MQ=255)

                                                                                             gTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGAt                                          <  1:10899/140‑1 (MQ=255)

                                                                                             gTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGAt                                          <  1:42989/140‑1 (MQ=255)

                                                                                             gTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGAt                                          <  2:1090963/140‑1 (MQ=255)

                                                                                               tATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATaa                                        <  1:1129138/140‑1 (MQ=255)

                                                                                               tATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATaa                                        <  2:54711/140‑1 (MQ=255)

                                                                                               tATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATaa                                        >  1:229958/1‑140 (MQ=255)

                                                                                                aTCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATGGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATaaa                                       <  1:694771/140‑1 (MQ=255)

                                                                                                 tCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAAt                                      <  1:1570139/140‑1 (MQ=255)

                                                                                                    aCCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTg                                   <  1:43211/140‑1 (MQ=255)

                                                                                                      cTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGt                                 >  1:691096/1‑140 (MQ=255)

                                                                                                            agagaCATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATaa                           <  2:1288602/140‑1 (MQ=255)

                                                                                                              agaCATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACg                         >  2:1554480/1‑140 (MQ=255)

                                                                                                              agaCATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACg                         <  2:609511/140‑1 (MQ=255)

                                                                                                              agaCATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACg                         >  2:1054406/1‑140 (MQ=255)

                                                                                                              agaCATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACg                         <  1:1121194/140‑1 (MQ=255)

                                                                                                               gaCATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGc                        >  2:1308000/1‑140 (MQ=255)

                                                                                                                aCATAAAAGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGcc                       >  2:1228951/1‑140 (MQ=255)

                                                                                                                       aGGGGGTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGc                <  2:1195470/140‑1 (MQ=255)

                                                                                                                        gggggTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGcc               <  2:324975/140‑1 (MQ=255)

                                                                                                                        gggggTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGcc               <  1:1465879/140‑1 (MQ=255)

                                                                                                                         ggggTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGcca              <  2:43366/140‑1 (MQ=255)

                                                                                                                         ggggTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGcca              >  2:1369166/1‑140 (MQ=255)

                                                                                                                          gggTTAGCCAGTTGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGccac             >  2:627687/1‑140 (MQ=255)

                                                                                                                          gggTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGccac             <  1:956884/140‑1 (MQ=255)

                                                                                                                          gggTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGccac             <  1:1085783/140‑1 (MQ=255)

                                                                                                                            gTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGccacca           >  1:41860/1‑140 (MQ=255)

                                                                                                                            gTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGccacca           <  1:1226755/140‑1 (MQ=255)

                                                                                                                            gTTAGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGccacca           <  2:1146697/140‑1 (MQ=255)

                                                                                                                               aGCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTg        >  2:1030957/1‑140 (MQ=255)

                                                                                                                                gCCAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTgg       <  1:1388269/140‑1 (MQ=255)

                                                                                                                                  cAGATGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTgggg     <  1:811101/140‑1 (MQ=255)

                                                                                                                                     aTGACATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTGGGGAAg  >  1:773574/1‑140 (MQ=255)

CCCGCGCGATTTTGCCTGCGTCACCAGTTCGTCAAAATCGTCCAGCGTGCCGTAGGTGGGATCAATCGCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGGCATCAACGCCCAGTTTATGCAGATAGTCCAGGTGTTGGATAACGCCACGTAAATCGCCGGTACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTGGGGAAG  >  NC_000913/4464428‑4464700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`