Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	411,118	A→G	intergenic (+66/+179)	mak → / ← araJ	manno(fructo)kinase/putative transport protein AraJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	411,118	0	A	G	100.0%	307.7 / NA	80	intergenic (+66/+179)	mak/araJ	manno(fructo)kinase/putative transport protein AraJ
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (49/31);  total (49/31)

GGTGATTCCAGCGGCGTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACCGCGTAGGGCGGATAAGGCGT  >  NC_000913/411002‑411252                                                                                                                     |                                                                                                                                       ggTGATTCCAGCGGCGTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGAt                                                                                                                 >  2:285913/1‑140 (MQ=255)        ccAGCGGCGTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGt                                                                                                          >  2:1216136/1‑140 (MQ=255)          aGCGGCGTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTc                                                                                                        <  2:1518209/140‑1 (MQ=255)           gcggcgTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCa                                                                                                       >  1:345551/1‑140 (MQ=255)               cgTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCAcgcc                                                                                                   >  1:1055414/1‑140 (MQ=255)               cgTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCAcgcc                                                                                                   >  1:752846/1‑140 (MQ=255)                gTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCAcgccg                                                                                                  <  1:494206/140‑1 (MQ=255)                 tACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGATGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCAcgccgc                                                                                                 >  2:1184679/1‑140 (MQ=255)                 tACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCAcgccgc                                                                                                 >  1:515762/1‑140 (MQ=255)                 tACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCAcgccgc                                                                                                 >  2:1180561/1‑140 (MQ=255)                 tACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCAcgccgc                                                                                                 >  1:1477580/1‑140 (MQ=255)                 tACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCAcgccgc                                                                                                 >  2:1568376/1‑140 (MQ=255)                 tACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCAcgccgc                                                                                                 >  2:123723/1‑140 (MQ=255)                   cgcgGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCAt                                                                                               <  1:1482759/140‑1 (MQ=255)                        cgcTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc                                                                                          >  1:1578253/1‑140 (MQ=255)                         gcTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa                                                                                         >  1:90425/1‑140 (MQ=255)                         gcTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa                                                                                         >  2:1409747/1‑140 (MQ=255)                           tGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAt                                                                                       <  2:460078/140‑1 (MQ=255)                           tGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAt                                                                                       >  1:645349/1‑140 (MQ=255)                           tGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAt                                                                                       <  2:1073154/140‑1 (MQ=255)                           tGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAt                                                                                       <  1:1066988/140‑1 (MQ=255)                               tGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGt                                                                                   <  2:152195/140‑1 (MQ=255)                                  ttATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCt                                                                                >  2:269186/1‑140 (MQ=255)                                       gCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGAt                                                                           >  1:494866/1‑140 (MQ=255)                                       gCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGAt                                                                           >  2:243650/1‑140 (MQ=255)                                       gCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGAt                                                                           >  1:41067/1‑140 (MQ=255)                                          acaAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGcc                                                                        >  1:1293703/1‑140 (MQ=255)                                          acaAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGcc                                                                        >  1:442080/1‑140 (MQ=255)                                            aaGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTg                                                                      >  1:222584/1‑140 (MQ=255)                                            aaGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTg                                                                      >  1:1294485/1‑140 (MQ=255)                                            aaGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTg                                                                      >  1:926334/1‑140 (MQ=255)                                            aaGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTg                                                                      >  2:277683/1‑140 (MQ=255)                                            aaGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTg                                                                      >  1:284940/1‑140 (MQ=255)                                            aaGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTg                                                                      >  1:1169564/1‑140 (MQ=255)                                                 tAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCg                                                                 >  1:418816/1‑140 (MQ=255)                                                 tAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCg                                                                 >  2:117116/1‑140 (MQ=255)                                                  aaaaaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGa                                                                >  2:61867/1‑140 (MQ=255)                                                        cGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTg                                                          >  2:1501138/1‑140 (MQ=255)                                                        cGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTg                                                          >  1:135103/1‑140 (MQ=255)                                                         gTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGc                                                         <  2:543610/140‑1 (MQ=255)                                                         gTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGc                                                         >  1:658533/1‑140 (MQ=255)                                                         gTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGc                                                         <  1:285913/140‑1 (MQ=255)                                                         gTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGc                                                         <  1:1531497/140‑1 (MQ=255)                                                          tAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGcc                                                        >  1:838704/1‑140 (MQ=255)                                                           aGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCcg                                                       >  2:526443/1‑140 (MQ=255)                                                              cAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCGATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGt                                                    <  1:1411071/140‑1 (MQ=255)                                                                     cgcATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCa                                             <  1:89191/140‑1 (MQ=255)                                                                       catcatGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg                                           <  2:471772/140‑1 (MQ=255)                                                                         tcatGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGTGTTCACGTCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                         >  1:1114039/1‑140 (MQ=255)                                                                            tGCCTGATGCGGCGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGc                                      <  2:354695/140‑1 (MQ=255)                                                                             gCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCa                                     <  1:269186/140‑1 (MQ=255)                                                                              ccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCaa                                    >  1:1551360/1‑140 (MQ=255)                                                                                tGATGCGGCGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTGCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCaaaa                                  <  2:1089462/140‑1 (MQ=255)                                                                                tGATGCGATGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCaaaa                                  <  1:1184679/140‑1 (MQ=255)                                                                                tGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCaaaa                                  <  1:1180561/140‑1 (MQ=255)                                                                                tGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCaaaa                                  <  2:494866/140‑1 (MQ=255)                                                                                tGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCaaaa                                  <  2:418816/140‑1 (MQ=255)                                                                                  aTGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAAtg                                >  2:1352240/1‑140 (MQ=255)                                                                                   tGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAAtgt                               >  1:1079812/1‑140 (MQ=255)                                                                                   tGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAAtgt                               >  1:1113068/1‑140 (MQ=255)                                                                                    gCGACGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAAtgtg                              >  1:423405/1‑140 (MQ=255)                                                                                       aCGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCa                           >  2:1446098/1‑140 (MQ=255)                                                                                       aCGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCa                           >  2:1310867/1‑140 (MQ=255)                                                                                        cGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAg                          >  1:493035/1‑140 (MQ=255)                                                                                        cGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAg                          <  1:1312609/140‑1 (MQ=255)                                                                                        cGCTTGCCGCGTCTTATCAGGCCTACAAAGGGTACCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAg                          >  1:350145/1‑140 (MQ=255)                                                                                         gCTTGCCGCGTCATATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGa                         <  1:1000505/140‑1 (MQ=255)                                                                                          cTTGCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGaa                        <  2:752846/140‑1 (MQ=255)                                                                                             gCCGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACcg                     >  2:646590/1‑140 (MQ=255)                                                                                              ccGCGTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACcgc                    <  2:149428/140‑1 (MQ=255)                                                                                               cgcgTCTTATCAGGTCTACAAAGGGTGCCAGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGTCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACcgcg                   <  1:1501317/140‑1 (MQ=255)                                                                                               cgcgTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACcgcg                   <  2:41067/140‑1 (MQ=255)                                                                                               cgcgTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACcgcg                   <  1:184999/140‑1 (MQ=255)                                                                                               cgcgTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACcgcg                   <  1:243650/140‑1 (MQ=255)                                                                                               cgcgTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACcgcg                   <  1:277683/140‑1 (MQ=255)                                                                                                gcgTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACCGCGt                  <  2:442080/140‑1 (MQ=255)                                                                                                  gTCTTATCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACCGCGTAg                <  1:331709/140‑1 (MQ=255)                                                                                                       aTCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACCGCGTAGGGCgg           >  1:459692/1‑140 (MQ=255)                                                                                                        tCAGGCCTACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACCGCGTAGGGCGGa          <  2:515762/140‑1 (MQ=255)                                                                                                               tACAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACCGCGTAGGGCGGATAAGGCg   >  2:268960/1‑140 (MQ=255)                                                                                                                aCAAAGGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACCGCGTAGGGCGGATAAGGCGt  >  1:672696/1‑140 (MQ=255)                                                                                                                     |                                                                                                                                       GGTGATTCCAGCGGCGTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACCGCGTAGGGCGGATAAGGCGT  >  NC_000913/411002‑411252

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑