| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,298,954 | T→C | G119G (GGT→GGC) | ychE → | putative inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,298,954 | 0 | T | C | 99.1% | 392.6 / ‑5.1 | 105 | G119G (GGT→GGC) | ychE | putative inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (51/53); total (51/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
TCAATTGATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGTGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTATGTTGTT > NC_000913/1298820‑1299090 | tCAATTGATTCGTTCCGTACCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATtggcgtggt < 2:1357827/140‑1 (MQ=255) ttGATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGAATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCa < 1:4906/140‑1 (MQ=255) tGATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATAATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCAc > 2:1160926/1‑140 (MQ=255) gATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACt > 1:1557498/1‑140 (MQ=255) gATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACt < 1:113749/140‑1 (MQ=255) gATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACt > 1:1275057/1‑140 (MQ=255) ttCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTgg < 2:260257/140‑1 (MQ=255) tCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGc > 1:896662/1‑140 (MQ=255) tCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGc > 2:364437/1‑140 (MQ=255) cGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCg < 2:630903/140‑1 (MQ=255) cGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCg < 1:1415904/140‑1 (MQ=255) ttCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGtt > 2:356923/1‑140 (MQ=255) ttCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGtt > 1:926779/1‑140 (MQ=255) ccGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGc > 2:1296139/1‑140 (MQ=255) tCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTg < 2:1287927/140‑1 (MQ=255) ccGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATg > 1:823942/1‑140 (MQ=255) gggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc < 1:683743/140‑1 (MQ=255) gggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc < 2:503824/140‑1 (MQ=255) gggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc < 1:1569149/140‑1 (MQ=255) gggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc < 2:492524/140‑1 (MQ=255) gggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc < 1:530909/140‑1 (MQ=255) gggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc < 2:332757/140‑1 (MQ=255) gggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGACAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc < 1:1251621/140‑1 (MQ=255) ggggTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCg > 2:97221/1‑140 (MQ=255) tATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGTGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGc < 1:1374058/140‑1 (MQ=255) tATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGc < 1:644042/140‑1 (MQ=255) aTCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGcc > 2:407065/1‑140 (MQ=255) aTCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGcc > 2:315319/1‑140 (MQ=255) cTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAgg < 1:1298962/140‑1 (MQ=255) ggtggtGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAgggg > 1:1528824/1‑140 (MQ=255) gtggtgACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGc > 2:78796/1‑140 (MQ=255) tggtgACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCg < 1:189473/140‑1 (MQ=255) ggtgACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGa < 2:823942/140‑1 (MQ=255) ggtgACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGa < 1:393959/140‑1 (MQ=255) gACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGc > 2:1534061/1‑123 (MQ=255) aCAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAg > 2:67821/1‑140 (MQ=255) aaTAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGtt > 2:511919/1‑140 (MQ=255) aaTAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGCGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGtt > 1:1519855/1‑140 (MQ=255) tAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCt > 1:1463703/1‑140 (MQ=255) cGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGGCAGGGGCGGTCAGCTCTAcc > 2:1058794/1‑140 (MQ=255) cGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTAcc < 1:356923/140‑1 (MQ=255) cGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTAcc < 1:993735/140‑1 (MQ=255) cGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGGTCTAcc > 2:231242/1‑140 (MQ=255) aTGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCAt > 1:464196/1‑140 (MQ=255) tGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCACGGGCGATATGTTCCACCCTc > 1:1245757/1‑140 (MQ=255) tCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGGTCAGTTCTACCAACgc > 2:933239/1‑139 (MQ=255) tCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGt > 1:1550594/1‑140 (MQ=255) tCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGt > 1:742961/1‑140 (MQ=255) tCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGt > 1:1252337/1‑140 (MQ=255) tCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGt > 1:393993/1‑140 (MQ=255) cGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTc < 2:1286912/140‑1 (MQ=255) atgatCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTg > 2:217159/1‑140 (MQ=255) atCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAATCCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTgggg < 1:984981/140‑1 (MQ=255) atCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTgggg < 2:396465/140‑1 (MQ=255) cAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTa < 1:724996/140‑1 (MQ=255) cAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTa < 2:1463703/140‑1 (MQ=255) gCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTAcg > 1:1476932/1‑140 (MQ=255) cGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGGTCTACCATCGTCTGGGGGAcgc > 2:255680/1‑140 (MQ=255) ggCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTAcgcg < 1:821350/140‑1 (MQ=255) ggCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTAcgcg < 2:334436/140‑1 (MQ=255) aGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTAt < 1:364437/140‑1 (MQ=255) gCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATc < 1:407065/140‑1 (MQ=255) gCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATc < 1:315319/140‑1 (MQ=255) cTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGTGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATca < 2:1319771/140‑1 (MQ=255) ggCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAg < 2:926779/140‑1 (MQ=255) ggCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAg > 1:388750/1‑140 (MQ=255) gCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGGTATCACAGc > 2:972883/1‑140 (MQ=255) cGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCa < 2:9181/140‑1 (MQ=255) cGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCa < 1:1212143/140‑1 (MQ=255) cGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCa < 2:235281/140‑1 (MQ=255) gATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGGACGCGTTATCACAGCATTAg > 2:1134812/1‑140 (MQ=255) gATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGGACGCGTTATCACAGCATTAg > 1:1165235/1‑140 (MQ=255) aaaCAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTa < 1:811072/140‑1 (MQ=255) aaCAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTAt < 1:1160926/140‑1 (MQ=255) aaCAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGtt > 2:448514/1‑140 (MQ=255) aCAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGttt > 1:65257/1‑140 (MQ=255) caagcaagAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTg > 1:1345583/1‑140 (MQ=255) caagcaagAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTg > 2:1511939/1‑140 (MQ=255) caagcaagAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGGACGCGTTATCACAGCATTAGCTATCTGTTTg > 2:606325/1‑140 (MQ=255) agcaagAAAAATCAGAATCCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGt < 1:933239/140‑1 (MQ=255) gcaagAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGtt > 1:298422/1‑140 (MQ=255) gcaagAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGGTCTACCATCGTCTGGGGGACGCGTTATCACAGCATTAGCTATCTGTTTGGtt > 1:676970/1‑140 (MQ=255) aaaaaTCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGTCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCttt < 2:1015949/140‑1 (MQ=255) aaaaaTCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCttt < 2:896662/140‑1 (MQ=255) aaaaTCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTtg < 2:464196/140‑1 (MQ=255) aaaaTCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTtg < 1:1587887/140‑1 (MQ=255) aaaTCAGAAACCGCGGTACGTGAAAGCATTGACGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTtgt < 1:1357160/140‑1 (MQ=255) aTCAGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTgg < 1:1058794/140‑1 (MQ=255) aGAAACCGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTa < 2:1550594/140‑1 (MQ=255) ccGCGGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCa < 1:1134812/140‑1 (MQ=255) cgGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTg < 1:1296139/140‑1 (MQ=255) cgGTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGGACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTg > 1:1040718/1‑140 (MQ=255) ggTACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGt < 2:1476932/140‑1 (MQ=255) tACGTGAAAGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTc < 1:217159/140‑1 (MQ=255) aGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGCTCAGGTCTACCCTCGTCTGGGGGACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTTtg > 2:685013/1‑140 (MQ=255) aGCATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTAtg < 2:1399422/140‑1 (MQ=255) cATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTAtgtt > 1:1427742/1‑140 (MQ=255) cATTGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTAtgtt > 2:489525/1‑140 (MQ=255) ttGGCGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTAtgttgt > 1:1027338/1‑140 (MQ=255) tggcgtggtgCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTGCCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTATgttgtt < 2:1528824/140‑1 (MQ=255) | TCAATTGATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGTGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTATGTTGTT > NC_000913/1298820‑1299090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |