Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,038,337	C→T	A163T (GCT→ACT)	hprR ←	DNA‑binding transcriptional dual regulator HprR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,038,337	0	C	T	100.0%	328.2 / NA	94	A163T (GCT→ACT)	hprR	DNA‑binding transcriptional dual regulator HprR
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (18/76);  total (18/76)

ATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTAATGTTGAATTCAAAGCGTGATGT  >  NC_000913/2038201‑2038473                                                                                                                                         |                                                                                                                                         aTTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGttct                                                                                                                                       >  1:606059/1‑140 (MQ=255) aTTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGttct                                                                                                                                       >  1:183027/1‑140 (MQ=255)   tAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTgg                                                                                                                                     <  1:1522413/140‑1 (MQ=255)   tAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTgg                                                                                                                                     <  1:532100/140‑1 (MQ=255)    aGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGa                                                                                                                                    <  1:1069038/140‑1 (MQ=255)    aGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGa                                                                                                                                    <  1:818378/140‑1 (MQ=255)    aGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGa                                                                                                                                    <  2:1215504/140‑1 (MQ=255)        tttCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGcc                                                                                                                                <  2:623271/140‑1 (MQ=255)         ttCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCa                                                                                                                               <  1:311749/140‑1 (MQ=255)         ttCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCa                                                                                                                               <  1:269082/140‑1 (MQ=255)                  aGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCaaa                                                                                                                      <  1:1509131/140‑1 (MQ=255)                    gATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGt                                                                                                                    <  1:1281405/140‑1 (MQ=255)                    gATCATCAACTTTAGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGt                                                                                                                    <  2:397232/140‑1 (MQ=255)                        atcaACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACt                                                                                                                >  2:614789/1‑140 (MQ=255)                          caACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGa                                                                                                              >  1:49101/1‑140 (MQ=255)                                 tGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCt                                                                                                       >  2:273304/1‑140 (MQ=255)                                   cgcgGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTg                                                                                                     <  2:1192766/140‑1 (MQ=255)                                   cgcgGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTg                                                                                                     <  2:589923/140‑1 (MQ=255)                                     cgGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTgcg                                                                                                   <  1:1327062/140‑1 (MQ=255)                                        ggCCTGCGAATGGCGTCGTTCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt                                                                                                <  1:448617/139‑1 (MQ=255)                                        aGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt                                                                                                <  1:776102/140‑1 (MQ=255)                                        aGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt                                                                                                <  1:608249/140‑1 (MQ=255)                                        aGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt                                                                                                <  1:782/140‑1 (MQ=255)                                        aGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt                                                                                                <  2:1375297/140‑1 (MQ=255)                                        aGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt                                                                                                <  2:1503036/140‑1 (MQ=255)                                        aGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt                                                                                                <  2:1587134/140‑1 (MQ=255)                                        aGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt                                                                                                <  2:475297/140‑1 (MQ=255)                                        aGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt                                                                                                <  1:520421/140‑1 (MQ=255)                                        aGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt                                                                                                <  2:652465/140‑1 (MQ=255)                                        aGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt                                                                                                <  2:994210/140‑1 (MQ=255)                                        aGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt                                                                                                <  1:1384860/140‑1 (MQ=255)                                        aGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt                                                                                                <  1:1415616/140‑1 (MQ=255)                                        aGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt                                                                                                <  1:113010/140‑1 (MQ=255)                                          ccTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCa                                                                                              <  2:158224/140‑1 (MQ=255)                                          ccTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCa                                                                                              <  1:1138873/140‑1 (MQ=255)                                             gCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAgtg                                                                                           <  2:508411/140‑1 (MQ=255)                                             gCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAgtg                                                                                           <  2:1474643/140‑1 (MQ=255)                                             gCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAgtg                                                                                           <  1:192884/140‑1 (MQ=255)                                              cGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAgtgt                                                                                          <  1:1276043/140‑1 (MQ=255)                                              cGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAgtgt                                                                                          <  2:121842/140‑1 (MQ=255)                                              cGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAgtgt                                                                                          <  2:596709/140‑1 (MQ=255)                                              cGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAgtgt                                                                                          <  2:183027/140‑1 (MQ=255)                                              cGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAgtgt                                                                                          >  2:1043210/1‑140 (MQ=255)                                              cGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAgtgt                                                                                          <  1:791134/140‑1 (MQ=255)                                              cGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAgtgt                                                                                          <  2:9453/140‑1 (MQ=255)                                                  tGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATa                                                                                      <  1:7667/140‑1 (MQ=255)                                                  tGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATa                                                                                      <  1:1427755/140‑1 (MQ=255)                                                   ggCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATAc                                                                                     <  2:685057/140‑1 (MQ=255)                                                   ggCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATAc                                                                                     <  1:1240216/140‑1 (MQ=255)                                                   ggCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATAc                                                                                     <  2:836170/140‑1 (MQ=255)                                                        cGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGata                                                                                <  2:133979/140‑1 (MQ=255)                                                        cGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGata                                                                                >  2:1003483/1‑140 (MQ=255)                                                         gTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGatat                                                                               <  2:975529/140‑1 (MQ=255)                                                            cACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGt                                                                            <  2:1306901/140‑1 (MQ=255)                                                             aCCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTc                                                                           <  2:1185246/140‑1 (MQ=255)                                                              ccGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTcc                                                                          <  1:1557261/140‑1 (MQ=255)                                                              ccGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTcc                                                                          <  1:1043210/140‑1 (MQ=255)                                                                   ttGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCt                                                                     <  2:1116076/140‑1 (MQ=255)                                                                   ttGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCt                                                                     <  1:686493/140‑1 (MQ=255)                                                                   ttGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCt                                                                     <  2:1089561/140‑1 (MQ=255)                                                                   ttGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCt                                                                     <  1:1557373/140‑1 (MQ=255)                                                                       tATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTcaca                                                                 <  2:888005/140‑1 (MQ=255)                                                                        aTCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCacac                                                                >  1:497857/1‑140 (MQ=255)                                                                         tCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACt                                                               <  1:729709/140‑1 (MQ=255)                                                                         tCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACt                                                               >  1:1150322/1‑140 (MQ=255)                                                                         tCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACt                                                               <  2:1400781/140‑1 (MQ=255)                                                                         tCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACt                                                               >  1:1003626/1‑140 (MQ=255)                                                                         tCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACt                                                               <  2:299899/140‑1 (MQ=255)                                                                           aCTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTAt                                                             >  2:1215689/1‑140 (MQ=255)                                                                              aTCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGAc                                                          <  1:134014/140‑1 (MQ=255)                                                                                cAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTa                                                        >  1:713103/1‑140 (MQ=255)                                                                                  aaGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAAc                                                      <  2:606059/140‑1 (MQ=255)                                                                                  aaGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAAc                                                      <  1:1433743/140‑1 (MQ=255)                                                                                  aaGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAAc                                                      <  1:399689/140‑1 (MQ=255)                                                                                   aGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACa                                                     <  2:792800/140‑1 (MQ=255)                                                                                    gTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACag                                                    <  1:326311/140‑1 (MQ=255)                                                                                    gTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACag                                                    <  1:851613/140‑1 (MQ=255)                                                                                       gATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGt                                                 >  2:23811/1‑140 (MQ=255)                                                                                        aTTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTc                                                <  2:992747/140‑1 (MQ=255)                                                                                         ttCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGAAACTGAAACTCCTTGCGCGTCAGTGCAACACTCATCTTGTCCCTGCACACACTATGACTAACAGAGTcc                                               >  2:295895/1‑140 (MQ=255)                                                                                                     cACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCg                                   <  1:1151306/140‑1 (MQ=255)                                                                                                      aCTCGCAATAACCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGc                                  >  2:612220/1‑140 (MQ=255)                                                                                                               aaCCGTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTa                         <  1:695605/140‑1 (MQ=255)                                                                                                                   gTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTAATGt                     <  2:1062428/140‑1 (MQ=255)                                                                                                                   gTTCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTAATGt                     <  2:1518350/140‑1 (MQ=255)                                                                                                                     tCTGGGTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTAATGTTg                   <  2:1101985/140‑1 (MQ=255)                                                                                                                        gggTATAATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTAATGTTGAAt                >  1:1538210/1‑140 (MQ=255)                                                                                                                             taATTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTAATGTTGAATTCaaa           <  2:49101/140‑1 (MQ=255)                                                                                                                              aaTTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGTAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTAATGTTGAATTCAAAg          >  1:1558243/1‑140 (MQ=255)                                                                                                                              aaTTTCGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTAATGTTGAATTCAAAg          >  1:324948/1‑140 (MQ=255)                                                                                                                                   cGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTAATGTTGAATTCAAAGCGTGa     >  1:530654/1‑140 (MQ=255)                                                                                                                                   cGCCAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTAATGTTGAATTCAAAGCGTGa     >  1:1002719/1‑140 (MQ=255)                                                                                                                                     ccAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTAATGTTGAATTCAAAGCGTGATg   <  2:1150322/140‑1 (MQ=255)                                                                                                                                      cAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTAATGTTGAATTCAAAGCGTGATGt  <  2:1003626/140‑1 (MQ=255)                                                                                                                                      cAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTAATGTTGAATTCAAAGCGTGATGt  <  1:732062/140‑1 (MQ=255)                                                                                                                                      cAGTTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTAATGTTGAATTCAAAGCGTGATGt  <  1:614789/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                         ATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTAATGTTGAATTCAAAGCGTGATGT  >  NC_000913/2038201‑2038473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑