Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,795,996	C→T	A108V (GCG→GTG)	csiR →	DNA‑binding transcriptional repressor CsiR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,795,996	0	C	T	100.0%	258.5 / NA	77	A108V (GCG→GTG)	csiR	DNA‑binding transcriptional repressor CsiR
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (41/36);  total (41/36)

GGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACG  >  NC_000913/2795860‑2796131                                                                                                                                         |                                                                                                                                        gggTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCa                                                                                                                                      <  1:512453/140‑1 (MQ=255)  ggTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCAt                                                                                                                                     <  1:126448/140‑1 (MQ=255)   gTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATc                                                                                                                                    <  2:122262/140‑1 (MQ=255)    tATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATct                                                                                                                                   >  2:1199091/1‑140 (MQ=255)       cGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATctgct                                                                                                                                <  2:1125402/140‑1 (MQ=255)          gTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAg                                                                                                                             <  2:384296/140‑1 (MQ=255)          gTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAg                                                                                                                             <  1:793668/140‑1 (MQ=255)          gTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAg                                                                                                                             <  1:471921/140‑1 (MQ=255)            ggCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTa                                                                                                                           <  2:178273/140‑1 (MQ=255)            ggCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTa                                                                                                                           <  2:1281233/140‑1 (MQ=255)            ggCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTa                                                                                                                           <  1:305710/140‑1 (MQ=255)                          agCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCtgt                                                                                                             >  1:1043205/1‑140 (MQ=255)                          agCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCtgt                                                                                                             >  2:1199293/1‑140 (MQ=255)                          agCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCtgt                                                                                                             >  1:1507476/1‑140 (MQ=255)                           gCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCtgtg                                                                                                            >  1:238332/1‑140 (MQ=255)                            cAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGa                                                                                                           >  2:230571/1‑140 (MQ=255)                              ggAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACg                                                                                                         >  1:882739/1‑140 (MQ=255)                              ggAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACg                                                                                                         >  1:489805/1‑140 (MQ=255)                              ggAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACg                                                                                                         >  1:36788/1‑140 (MQ=255)                                    gctCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCg                                                                                                   >  1:1043776/1‑140 (MQ=255)                                    gctCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCg                                                                                                   >  1:922542/1‑140 (MQ=255)                                       cGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCgaga                                                                                                <  1:738040/140‑1 (MQ=255)                                           atTTTCGACGCCCGCACCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAAt                                                                                            <  1:1016343/140‑1 (MQ=255)                                            ttttCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATg                                                                                           <  2:1456797/140‑1 (MQ=255)                                               tCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCtt                                                                                        <  1:313347/140‑1 (MQ=255)                                                 gACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTtga                                                                                      <  2:751375/140‑1 (MQ=255)                                                       cgcgCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTg                                                                                >  1:628365/1‑140 (MQ=255)                                                         cgcCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTAGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTggg                                                                              <  2:467752/140‑1 (MQ=255)                                                                atGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCg                                                                       <  2:238332/140‑1 (MQ=255)                                                                    aaGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGtcat                                                                   >  1:1051310/1‑140 (MQ=255)                                                                    aaGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGtcat                                                                   >  1:744123/1‑140 (MQ=255)                                                                         aTGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGc                                                              >  1:1447623/1‑140 (MQ=255)                                                                         aTGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGc                                                              >  2:489937/1‑140 (MQ=255)                                                                          tGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCg                                                             >  1:869369/1‑140 (MQ=255)                                                                          tGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCg                                                             <  1:230571/140‑1 (MQ=255)                                                                           gTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGt                                                            <  1:1199091/140‑1 (MQ=255)                                                                              aGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTc                                                         >  2:671350/1‑140 (MQ=255)                                                                                    tCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACgg                                                   >  2:743043/1‑140 (MQ=255)                                                                                    tCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACgg                                                   >  2:52365/1‑140 (MQ=255)                                                                                      tGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCa                                                 >  1:331618/1‑140 (MQ=255)                                                                                       ggCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCaa                                                >  1:740772/1‑140 (MQ=255)                                                                                       ggCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCaa                                                <  2:628365/140‑1 (MQ=255)                                                                                        gCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAAt                                               >  2:1464985/1‑140 (MQ=255)                                                                                        gCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAAt                                               >  1:1421189/1‑140 (MQ=255)                                                                                             tGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTgg                                          <  1:947092/140‑1 (MQ=255)                                                                                              gCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCGGCGAGAAAATGTTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGc                                         >  2:251799/1‑140 (MQ=255)                                                                                              gCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGGTGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGc                                         >  2:775370/1‑140 (MQ=255)                                                                                              gCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCACCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGc                                         >  1:247289/1‑140 (MQ=255)                                                                                               cccGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCg                                        <  2:662645/140‑1 (MQ=255)                                                                                               cccGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCg                                        <  2:922542/140‑1 (MQ=255)                                                                                                    ggTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCtg                                   <  1:1362749/140‑1 (MQ=255)                                                                                                    ggTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCtg                                   <  2:1374934/140‑1 (MQ=255)                                                                                                     gTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCtgt                                  >  1:504577/1‑140 (MQ=255)                                                                                                      tGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCtgtg                                 <  2:300098/140‑1 (MQ=255)                                                                                                      gggCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCtgtg                                 <  2:1545341/139‑1 (MQ=255)                                                                                                       ggCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTgg                                >  2:1323569/1‑140 (MQ=255)                                                                                                          gATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTtc                             <  2:848743/140‑1 (MQ=255)                                                                                                          gATGAGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTtc                             <  2:1272967/140‑1 (MQ=255)                                                                                                              aGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCAc                         >  1:76630/1‑140 (MQ=255)                                                                                                              aGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCAc                         >  2:1234543/1‑140 (MQ=255)                                                                                                              aGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGGtccgac                         >  2:689502/1‑136 (MQ=255)                                                                                                              aGTGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCCGTGGGTCTCAc                         >  2:236163/1‑140 (MQ=255)                                                                                                                tGGGAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGCCGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGGTCTCACTa                       >  2:374433/1‑140 (MQ=255)                                                                                                                  ggAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTAtt                     >  2:294549/1‑140 (MQ=255)                                                                                                                  ggAGGCAGACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTAtt                     >  2:161519/1‑140 (MQ=255)                                                                                                                         gACGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTATTTGCTGCa              >  1:389190/1‑140 (MQ=255)                                                                                                                          aCGTTCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCCGTGGGTCTCCCTATTTGCTGCaa             >  2:218420/1‑140 (MQ=255)                                                                                                                             ttCTCGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTATTTGCTGCAAATg          >  1:847388/1‑140 (MQ=255)                                                                                                                              tctcGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTATTTGCTGCAAATGc         <  2:869369/140‑1 (MQ=255)                                                                                                                                 cGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTg      <  2:1043776/140‑1 (MQ=255)                                                                                                                                 cGCAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCCGGGGTTTTCCCCACTTTCTGCAAATGCggg      >  2:1373356/1‑138 (MQ=255)                                                                                                                                   cAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGaa    <  2:740772/140‑1 (MQ=255)                                                                                                                                   cAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGaa    <  1:71446/140‑1 (MQ=255)                                                                                                                                   cAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGaa    <  2:1447623/140‑1 (MQ=255)                                                                                                                                   cAAAAGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGaa    <  1:1464985/140‑1 (MQ=255)                                                                                                                                    aaaaGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGGTGTGGTCCTCACCATTTGCTGCAAATGGGCGAAc   >  1:1174314/1‑140 (MQ=255)                                                                                                                                    aaaaGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAAc   <  1:52365/140‑1 (MQ=255)                                                                                                                                     aaaGTGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACg  <  1:1323569/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                        GGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACG  >  NC_000913/2795860‑2796131

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑