BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,816,829	T→C	S38G (AGT→GGT)	yqaA ←	DedA family protein YqaA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,816,829	0	T	C	100.0%	488.2 / NA	126	S38G (AGT→GGT)	yqaA	DedA family protein YqaA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (74/52); total (74/52)

Only 100 of 127 total aligned reads displayed.

CGTTTCAGCCAGCCGGTAGCTTTCTCTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACTGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTCACAGCAAGCGAACATCCACG  >  NC_000913/2816693‑2816958

cGTTTCAGCCAGCCGGTAGCTTTCTCTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGAt                                                                                                                                >  2:399301/1‑140 (MQ=255)

   ttCAGCCAGCCGGTAGCTTTCTCTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATccc                                                                                                                             <  1:661738/140‑1 (MQ=255)

    tCAGCCAGCCGGTAGCTTTCTCTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCg                                                                                                                            >  1:544943/1‑140 (MQ=255)

     cagccagcCGGTAGCTTTCTCTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCgg                                                                                                                           >  2:926508/1‑140 (MQ=255)

     cagccagcCGGTAGCTTTCTCTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCgg                                                                                                                           >  1:1520553/1‑140 (MQ=255)

           gccGGTAGCTTTCTCTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCa                                                                                                                     <  1:1168188/140‑1 (MQ=255)

           gccGGTAGCTTTCTCTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCa                                                                                                                     >  1:372800/1‑140 (MQ=255)

           gccGGTAGCTTTCTCTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCa                                                                                                                     >  2:57382/1‑140 (MQ=255)

            ccGGTAGCTTTCTCTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCaa                                                                                                                    >  1:467724/1‑140 (MQ=255)

            ccGGTAGCTTTCTCTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCaa                                                                                                                    >  2:746214/1‑140 (MQ=255)

              ggTAGCTTTCTCTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACa                                                                                                                  <  2:594977/140‑1 (MQ=255)

                tAGCTTTCTCTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACAtt                                                                                                                >  1:338670/1‑140 (MQ=255)

                     ttCTCTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGccac                                                                                                           <  2:747922/140‑1 (MQ=255)

                      tctcTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTAAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGccacc                                                                                                          >  1:860027/1‑140 (MQ=255)

                        tctTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAATACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAg                                                                                                        <  1:1103086/140‑1 (MQ=255)

                          ttGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCa                                                                                                      <  1:497903/140‑1 (MQ=255)

                          ttGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCa                                                                                                      <  2:925859/140‑1 (MQ=255)

                          ttGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCa                                                                                                      <  2:540677/140‑1 (MQ=255)

                          ttGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCa                                                                                                      <  2:884890/140‑1 (MQ=255)

                          ttGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCa                                                                                                      <  2:401200/140‑1 (MQ=255)

                             ccAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGa                                                                                                   >  2:1560838/1‑140 (MQ=255)

                             ccAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGa                                                                                                   >  2:318795/1‑140 (MQ=255)

                                gcgcGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACtt                                                                                                >  1:408988/1‑140 (MQ=255)

                                   cgATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCgg                                                                                             <  1:604214/140‑1 (MQ=255)

                                      tGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGt                                                                                          <  1:17106/140‑1 (MQ=255)

                                      tGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGt                                                                                          <  2:1350390/140‑1 (MQ=255)

                                      tGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGt                                                                                          <  1:189539/140‑1 (MQ=255)

                                        ttttACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTg                                                                                        <  2:1130461/140‑1 (MQ=255)

                                        ttttACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTg                                                                                        <  2:1158702/140‑1 (MQ=255)

                                        ttttACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTg                                                                                        <  2:64498/140‑1 (MQ=255)

                                        ttttACCCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTg                                                                                        <  2:1145725/140‑1 (MQ=255)

                                         tttACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGc                                                                                       <  2:1412526/140‑1 (MQ=255)

                                          ttACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGcc                                                                                      <  2:467724/140‑1 (MQ=255)

                                             cGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCggg                                                                                   <  1:746214/140‑1 (MQ=255)

                                                aaTGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGt                                                                                          <  1:1525486/130‑1 (MQ=255)

                                                aaTGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGaaa                                                                                >  1:1113451/1‑140 (MQ=255)

                                                aaTGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTaa                                                                                >  2:629116/1‑140 (MQ=255)

                                                aaTGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTaa                                                                                <  2:281050/140‑1 (MQ=255)

                                                  tGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATa                                                                              >  1:143988/1‑140 (MQ=255)

                                                  tGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATa                                                                              >  2:342959/1‑140 (MQ=255)

                                                  tGGAAAGAAACACCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATa                                                                              >  2:488060/1‑140 (MQ=255)

                                                     aaagaaaCGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAgtg                                                                           <  2:810545/140‑1 (MQ=255)

                                                     aaagaaaCGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAgtg                                                                           <  1:73637/140‑1 (MQ=255)

                                                     aaagaaaCGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAgtg                                                                           <  2:54254/140‑1 (MQ=255)

                                                         aaaCGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAgc                                                                       <  2:933864/140‑1 (MQ=255)

                                                          aaCGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAgcg                                                                      <  2:1074904/140‑1 (MQ=255)

                                                            cGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCt                                                                    >  1:1103639/1‑140 (MQ=255)

                                                            cGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCt                                                                    >  2:66680/1‑140 (MQ=255)

                                                            cGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCt                                                                    >  1:1403491/1‑140 (MQ=255)

                                                            cGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCt                                                                    >  1:310834/1‑140 (MQ=255)

                                                               ccAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTtag                                                                 >  1:323363/1‑140 (MQ=255)

                                                               ccAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTgag                                                                 >  1:452549/1‑140 (MQ=255)

                                                                cAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTgaga                                                                <  2:338670/140‑1 (MQ=255)

                                                                         cGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTg                                                       >  2:49220/1‑140 (MQ=255)

                                                                             agttaACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCaa                                                   <  2:356127/140‑1 (MQ=255)

                                                                             agttaACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCaa                                                   >  1:308363/1‑140 (MQ=255)

                                                                              gttaACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCaaa                                                  >  1:1353563/1‑140 (MQ=255)

                                                                                taACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAaaca                                                <  1:1265910/140‑1 (MQ=255)

                                                                                taACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAaaca                                                <  1:926508/140‑1 (MQ=255)

                                                                                  aCCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAaacaac                                              <  1:661688/140‑1 (MQ=255)

                                                                                   cccTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACg                                             >  2:790383/1‑140 (MQ=255)

                                                                                   cccTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACg                                             >  2:183068/1‑140 (MQ=255)

                                                                                    ccTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACga                                            >  1:1241962/1‑140 (MQ=255)

                                                                                    ccTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACga                                            >  1:1574740/1‑140 (MQ=255)

                                                                                     cTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACgag                                           >  2:403573/1‑140 (MQ=255)

                                                                                     cTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACgag                                           >  1:1275199/1‑140 (MQ=255)

                                                                                       ccAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGaa                                         >  1:933201/1‑140 (MQ=255)

                                                                                        cAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGaaa                                        >  2:196541/1‑140 (MQ=255)

                                                                                        cAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGaaa                                        >  1:844085/1‑140 (MQ=255)

                                                                                        cAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGaaa                                        >  1:907993/1‑140 (MQ=255)

                                                                                          aGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAg                                      <  2:414140/140‑1 (MQ=255)

                                                                                                ttACCCATTGTTTCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATaa                                >  2:454797/1‑140 (MQ=255)

                                                                                                ttACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATaa                                >  1:1354732/1‑140 (MQ=255)

                                                                                                ttACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATaa                                >  2:371375/1‑140 (MQ=255)

                                                                                                 tACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAAc                               >  1:74066/1‑140 (MQ=255)

                                                                                                      aTTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTtc                          >  1:574249/1‑140 (MQ=255)

                                                                                                      aTTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTtc                          >  2:1418498/1‑140 (MQ=255)

                                                                                                      aTTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTtc                          >  1:29506/1‑140 (MQ=255)

                                                                                                      aTTGTTGCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTtc                          >  2:489242/1‑140 (MQ=255)

                                                                                                       ttgttgCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTtca                         <  1:629116/140‑1 (MQ=255)

                                                                                                          ttgCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTtcactc                      >  2:1071180/1‑140 (MQ=255)

                                                                                                          ttgCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTtcactc                      >  1:87623/1‑140 (MQ=255)

                                                                                                            gCTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTtcactcac                    >  1:808938/1‑140 (MQ=255)

                                                                                                             cTGTTAAAACTAAAACCCAGGGATGGCCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTcaca                   >  1:229652/1‑140 (MQ=255)

                                                                                                             cTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTcaca                   >  2:1374097/1‑140 (MQ=255)

                                                                                                             cTGTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTcaca                   >  1:285218/1‑140 (MQ=255)

                                                                                                               gTTAAAACTAAAACCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTCACAGc                 <  1:49220/140‑1 (MQ=255)

                                                                                                                  aaaactaaaacCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCGAACAACGAGAAAAGCGATAACGCTTCACTCACAGCAAg              >  2:569696/1‑140 (MQ=255)

                                                                                                                  aaaactaaaacCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTCACAGCAAg              >  2:884603/1‑140 (MQ=255)

                                                                                                                  aaaactaaaacCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTCACAGCAAg              >  1:971628/1‑140 (MQ=255)

                                                                                                                  aaaactaaaacCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTCACAGCAAg              <  1:1544203/140‑1 (MQ=255)

                                                                                                                  aaaactaaaacCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTCACAGCAAg              >  1:956673/1‑140 (MQ=255)

                                                                                                                    aactaaaacCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTCACAGCAAGCg            <  1:399301/140‑1 (MQ=255)

                                                                                                                      ctaaagcCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTCACAGCAAGCGaa          <  2:143988/140‑1 (MQ=255)

                                                                                                                        aaaacCCAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTCACAGCAAGCGAACa        >  2:845726/1‑140 (MQ=255)

                                                                                                                              cAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTCACAGCAAGCGAACATCCACg  <  2:574249/140‑1 (MQ=255)

                                                                                                                              cAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTCACAGCAAGCGAACATCCACg  <  2:1574740/140‑1 (MQ=255)

                                                                                                                              cAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTCACAGCAAGCGAACATCCACg  <  2:1574231/140‑1 (MQ=255)

                                                                                                                              cAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTCACAGCAAGCGAACATCCACg  <  2:907993/140‑1 (MQ=255)

                                                                                                                              cAGGGATGACCGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTCACAGCAAGCGAACATCCACg  <  1:1123455/140‑1 (MQ=255)

CGTTTCAGCCAGCCGGTAGCTTTCTCTTGCCAGCGCGATGTTTTACGCAATGGAAAGAAACGCCCAAGGATAACGTTAGTTAACCCTCCAAGGCTATTACCCATTGTTGCTGTTAAAACTAAAACCCAGGGATGACTGATCCCGGAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACTACTGGCAAACAACGAGAAAAGCGATAACGCTTCACTCACAGCAAGCGAACATCCACG  >  NC_000913/2816693‑2816958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`