Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,840,018	A→G	intergenic (‑25/‑197)	nlpA ← / → yicS	lipoprotein‑28/uncharacterized protein YicS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,840,018	0	A	G	100.0%	340.6 / NA	89	intergenic (‑25/‑197)	nlpA/yicS	lipoprotein‑28/uncharacterized protein YicS
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (50/39);  total (50/39)

CGCCAACTTTAATGTGTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTACCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAG  >  NC_000913/3839882‑3840153                                                                                                                                         |                                                                                                                                        cGCCAACTTTAATGTGTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCt                                                                                                                                      <  2:69977/140‑1 (MQ=255) cGCCAACTTTAATGTGTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCt                                                                                                                                      <  1:95814/140‑1 (MQ=255) cGCCAACTTTAATGTGTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCt                                                                                                                                      >  1:1323035/1‑140 (MQ=255)   ccAACTTTAATGTGTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGa                                                                                                                                    <  2:1045523/140‑1 (MQ=255)    cAACTTTAATGTGTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGAc                                                                                                                                   >  2:619433/1‑140 (MQ=255)    cAACTTTAATGTGTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGAc                                                                                                                                   >  1:586314/1‑140 (MQ=255)    cAACTTTAATGTGTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGAc                                                                                                                                   >  1:616303/1‑140 (MQ=255)    cAACTTTAATGTGTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGAc                                                                                                                                   >  2:102414/1‑140 (MQ=255)     aaCTTTAATGTGTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACt                                                                                                                                  >  2:896413/1‑140 (MQ=255)     aaCTTTAATGTGTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACt                                                                                                                                  >  2:1470974/1‑140 (MQ=255)       cTTTAATGTGTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACtat                                                                                                                                <  1:339242/140‑1 (MQ=255)             tgtgTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGt                                                                                                                          <  1:15949/140‑1 (MQ=255)                 ttttGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAgg                                                                                                                      >  1:293267/1‑140 (MQ=255)                 ttttGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAgg                                                                                                                      >  2:1044244/1‑140 (MQ=255)                   ttGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTc                                                                                                                    >  1:1567935/1‑140 (MQ=255)                           ctgctACTCTGGTCGCAACCTGCCAGCAGAATTTCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGt                                                                                                            <  2:1089442/140‑1 (MQ=255)                           ctgctACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGt                                                                                                            >  1:573339/1‑140 (MQ=255)                           ctgctACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGt                                                                                                            >  1:1235809/1‑140 (MQ=255)                           ctgctACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGt                                                                                                            >  1:576618/1‑140 (MQ=255)                              ctACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTa                                                                                                         >  2:1398781/1‑140 (MQ=255)                                      gTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAaaacga                                                                                                 >  1:1569809/1‑140 (MQ=255)                                      gTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAaaacga                                                                                                 >  2:310709/1‑140 (MQ=255)                                      gTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAaaacga                                                                                                 >  1:1060931/1‑140 (MQ=255)                                      gTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAaaacga                                                                                                 >  2:395463/1‑140 (MQ=255)                                      gTCCCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCCGTCCGCAGATGATGCGACGACAGCTTCATTTTTTGATCCTTTTATTACCGATCCCCTGACTATAGCGGCAACGCCGCTGCGGCTTAAAaaacga                                                                                                 >  2:458516/1‑140 (MQ=255)                                       tCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAaaacgaa                                                                                                <  2:1430137/140‑1 (MQ=255)                                        cGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCt                                                                                                                 >  1:39251/1‑122 (MQ=255)                                        cGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCt                                                                                                                 <  2:39251/122‑1 (MQ=255)                                        cGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAaaacgaaa                                                                                               <  2:1093739/140‑1 (MQ=255)                                        cGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAaaacgaaa                                                                                               <  1:516556/140‑1 (MQ=255)                                        cGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAaaacgaaa                                                                                               <  1:1118901/140‑1 (MQ=255)                                        cGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAaaacgaaa                                                                                               <  1:271636/140‑1 (MQ=255)                                        cGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAaaacgaaa                                                                                               <  1:1362997/140‑1 (MQ=255)                                        cGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAaaacgaaa                                                                                               <  2:1370709/140‑1 (MQ=255)                                          cAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAaaacgaaacg                                                                                             <  1:619433/140‑1 (MQ=255)                                          cAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAaaacgaaacg                                                                                             <  1:102414/140‑1 (MQ=255)                                           aaCCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGc                                                                                            >  2:89666/1‑140 (MQ=255)                                           aaCCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGc                                                                                            >  1:88787/1‑140 (MQ=255)                                             ccTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTa                                                                                          <  2:1494892/140‑1 (MQ=255)                                             ccTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTa                                                                                          <  2:40654/140‑1 (MQ=255)                                             ccTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTa                                                                                          <  1:862826/140‑1 (MQ=255)                                                gCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCg                                                                                       >  1:972039/1‑140 (MQ=255)                                                  cagcatAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGAt                                                                                     <  1:1382580/140‑1 (MQ=255)                                                  cagcagAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGAt                                                                                     <  1:1044244/140‑1 (MQ=255)                                                        aaTTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAAt                                                                               >  1:36598/1‑140 (MQ=255)                                                               gCCAGCAATAATGCGGCCCCTGTCCGTAGATGCTGGGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGAAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGCATAAAAAgg                                                                        >  2:1567662/1‑140 (MQ=255)                                                               gCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAgg                                                                        >  1:1399415/1‑140 (MQ=255)                                                                       taatGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAg                                                                >  1:367071/1‑140 (MQ=255)                                                                         atGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTg                                                              <  1:1470974/140‑1 (MQ=255)                                                                         atGCGGACCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTg                                                              <  2:293267/140‑1 (MQ=255)                                                                          tGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTgg                                                             <  1:1192462/140‑1 (MQ=255)                                                                            cGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGaa                                                           >  2:1491672/1‑140 (MQ=255)                                                                               ccccTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAatat                                                        >  1:534551/1‑140 (MQ=255)                                                                               ccccTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAatat                                                        >  1:1108672/1‑140 (MQ=255)                                                                               ccccTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAatat                                                        >  1:866357/1‑140 (MQ=255)                                                                                cccTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAAtata                                                       <  2:616303/140‑1 (MQ=255)                                                                                   tGTCCGTAGATGATGTGTTGTCAGTTTCATTGTTTTATCCTTCTATTAATGATTGCCTGACTATAAAGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAg                                                    <  2:857838/140‑1 (MQ=255)                                                                                       cGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTg                                                <  2:576618/140‑1 (MQ=255)                                                                                           gatgatGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCAc                                            <  2:522881/140‑1 (MQ=255)                                                                                           gatgatGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCAc                                            <  2:63870/140‑1 (MQ=255)                                                                                           gatgatGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCAc                                            <  2:436697/140‑1 (MQ=255)                                                                                           gatgatGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCAc                                            <  1:296504/140‑1 (MQ=255)                                                                                           gatgatGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCAc                                            <  1:1583279/140‑1 (MQ=255)                                                                                               atgTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCActtct                                        >  2:1265722/1‑140 (MQ=255)                                                                                               atgTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCActtct                                        >  2:136227/1‑140 (MQ=255)                                                                                               atgTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCActtct                                        >  2:442287/1‑140 (MQ=255)                                                                                               atgTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCActtct                                        >  1:1178169/1‑140 (MQ=255)                                                                                               atgTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCActtct                                        >  1:1191608/1‑140 (MQ=255)                                                                                                 gtgtTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTa                                      <  2:41545/140‑1 (MQ=255)                                                                                                  tgttgtCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTAc                                     >  1:770226/1‑140 (MQ=255)                                                                                                   gttgtCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACt                                    >  1:115697/1‑140 (MQ=255)                                                                                                    ttgtCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTg                                   >  2:1343745/1‑140 (MQ=255)                                                                                                    ttgtCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTg                                   >  1:191928/1‑140 (MQ=255)                                                                                                    ttgtCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTg                                   >  1:87642/1‑140 (MQ=255)                                                                                                    ttgtCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTg                                   >  1:1305733/1‑140 (MQ=255)                                                                                                    ttgtCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTg                                   >  1:1323042/1‑140 (MQ=255)                                                                                                     tgtCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGa                                  >  1:1564730/1‑140 (MQ=255)                                                                                                     tgtCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGa                                  >  1:1169183/1‑140 (MQ=255)                                                                                                      gtCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGAc                                 >  1:1380771/1‑140 (MQ=255)                                                                                                      gtCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGAc                                 >  1:317352/1‑140 (MQ=255)                                                                                                      gtCAGTTTCATTTATTTATCCTTTTATTAATGATTGCCTGACTATAGCGGAAAGGTCGCAGCGGTATAAAAAACCAAACGCTATCGATAAGAATAAAAAGGAATAAGAGTGGAATATAAAGACTGGCACTTCTTACTGAc                                 >  2:153781/1‑140 (MQ=255)                                                                                                       tCAGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGAcc                                >  2:384271/1‑140 (MQ=255)                                                                                                         aGTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCAc                              >  1:1471351/1‑140 (MQ=255)                                                                                                          gTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACg                             >  2:102728/1‑140 (MQ=255)                                                                                                          gTTTCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACg                             >  2:1399261/1‑140 (MQ=255)                                                                                                            ttCATTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCa                           >  2:496169/1‑140 (MQ=255)                                                                                                               aTTTTTTTATCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAgc                        <  2:1399415/140‑1 (MQ=255)                                                                                                                       aTCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCTCTTCTTACTGACCACGCAAGCGCGTTTCg                <  2:1060931/140‑1 (MQ=255)                                                                                                                        tCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGt               <  2:573339/140‑1 (MQ=255)                                                                                                                        tCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGt               <  2:1567935/140‑1 (MQ=255)                                                                                                                        tCCTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGt               <  1:896413/140‑1 (MQ=255)                                                                                                                          cTTTTATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTAc             <  2:1191608/140‑1 (MQ=255)                                                                                                                            tttATTAATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAg           <  2:972039/140‑1 (MQ=255)                                                                                                                             ttattaATGATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGc          <  2:367071/140‑1 (MQ=255)                                                                                                                                     gATTGCCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATgag  <  1:102728/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                        CGCCAACTTTAATGTGTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTACCTGACTATAGCGGTAAGGTCGCTGCGGTTTAAAAAACGAAACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAG  >  NC_000913/3839882‑3840153

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑