BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,855,849	T→C	H41R (CAC→CGC)	yidG ←	putative inner membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,855,849	0	T	C	100.0%	552.0 / NA	145	H41R (CAC→CGC)	yidG	putative inner membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (40/105); total (40/105)

Only 100 of 149 total aligned reads displayed.

CGTGAAATTGGGAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTC  >  NC_000913/3855715‑3855982

cGTGAAATTGGGAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTg                                                                                                                                  >  2:163355/1‑140 (MQ=255)

 gTGAAATTGGGAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGa                                                                                                                                 <  1:1550153/140‑1 (MQ=255)

   gAAATTGGGAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATa                                                                                                                               <  1:964836/140‑1 (MQ=255)

    aaaTTGGGAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAg                                                                                                                              <  1:759798/140‑1 (MQ=255)

      aTTGGGAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGcc                                                                                                                            <  2:1084387/140‑1 (MQ=255)

      aTTGGGAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGcc                                                                                                                            >  2:254789/1‑140 (MQ=255)

      aTTGGGAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGcc                                                                                                                            >  1:499071/1‑140 (MQ=255)

      aTTGGGAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGcc                                                                                                                            <  2:546295/140‑1 (MQ=255)

        tGGGAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCaa                                                                                                                          >  1:426375/1‑140 (MQ=255)

        tGGGAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCaa                                                                                                                          <  1:167719/140‑1 (MQ=255)

          ggAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACg                                                                                                                        >  2:1335842/1‑140 (MQ=255)

          ggAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACg                                                                                                                        >  1:280938/1‑140 (MQ=255)

          ggAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACg                                                                                                                        >  2:652872/1‑140 (MQ=255)

           gAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGc                                                                                                                       >  2:1058005/1‑140 (MQ=255)

           gAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGc                                                                                                                       >  1:526875/1‑140 (MQ=255)

                aTCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCa                                                                                                                  <  2:123466/140‑1 (MQ=255)

                   gCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAAcg                                                                                                               <  1:80714/140‑1 (MQ=255)

                       ttCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGcc                                                                                                           <  2:1304626/140‑1 (MQ=255)

                        tCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCg                                                                                                          <  1:950756/140‑1 (MQ=255)

                        tCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCg                                                                                                          <  2:187983/140‑1 (MQ=255)

                        tCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCg                                                                                                          <  1:1112374/140‑1 (MQ=255)

                            gACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGc                                                                                                      <  1:541978/140‑1 (MQ=255)

                             aCATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGcc                                                                                                     >  2:1315322/1‑140 (MQ=255)

                              cATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGccc                                                                                                    <  1:1534452/140‑1 (MQ=255)

                                tCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAg                                                                                                  <  2:915560/140‑1 (MQ=255)

                                tCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAg                                                                                                  <  1:1093286/140‑1 (MQ=255)

                                tCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCATTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAg                                                                                                  <  1:119255/140‑1 (MQ=255)

                                  cATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCa                                                                                                <  1:1068873/140‑1 (MQ=255)

                                  cATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCa                                                                                                <  2:499071/140‑1 (MQ=255)

                                  cATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCa                                                                                                <  1:362066/140‑1 (MQ=255)

                                         ttGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACg                                                                                         >  1:1224681/1‑140 (MQ=255)

                                           gCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGaa                                                                                       <  2:493492/140‑1 (MQ=255)

                                            cGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGaaa                                                                                      >  1:1004186/1‑140 (MQ=255)

                                             gATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAAc                                                                                     <  1:239832/140‑1 (MQ=255)

                                             gATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAAc                                                                                     <  2:353415/140‑1 (MQ=255)

                                             gATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAAc                                                                                     <  2:747807/140‑1 (MQ=255)

                                             gATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAAc                                                                                     <  2:247550/140‑1 (MQ=255)

                                               ttACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCa                                                                                   <  1:403596/140‑1 (MQ=255)

                                               ttACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCa                                                                                   <  2:1075857/140‑1 (MQ=255)

                                               ttACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCa                                                                                   <  2:569852/140‑1 (MQ=255)

                                                tACGGGTGTAGTGCCCGGGGATCAGCACCACGATGGCGAGGATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGCTGCGTGTGATAGCCAGCGCGATCAACGGGCCGTAGCCCAGCATGGTACGAAACCAc                                                                                  <  2:1383453/140‑1 (MQ=255)

                                                 aCGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACg                                                                                 >  1:73426/1‑140 (MQ=255)

                                                  cGGGTGTAGTCCCAGAGGATCAGCGCCGCGAGGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCGGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGc                                                                                <  2:1226325/140‑1 (MQ=255)

                                                      tgtAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGt                                                                            <  1:1058005/140‑1 (MQ=255)

                                                         aGTGCCAGAGGATCAGCGCCACGATGGCTAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGAt                                                                         <  1:129480/140‑1 (MQ=255)

                                                         aGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGAt                                                                         >  2:566265/1‑140 (MQ=255)

                                                          gTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGAtg                                                                        <  1:719689/140‑1 (MQ=255)

                                                             ccAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACAAGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGAGGTgc                                                                     >  2:759294/1‑140 (MQ=255)

                                                              cAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTgcg                                                                    >  2:1112123/1‑140 (MQ=255)

                                                               agagGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTgcgc                                                                   >  1:133530/1‑140 (MQ=255)

                                                                gagGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCt                                                                  >  2:411390/1‑140 (MQ=255)

                                                                 agGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTc                                                                 <  1:575475/140‑1 (MQ=255)

                                                                    aTCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCgg                                                              >  2:425322/1‑140 (MQ=255)

                                                                    aTCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCgg                                                              >  2:809921/1‑140 (MQ=255)

                                                                     tCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTcc                                                                <  1:947091/137‑1 (MQ=255)

                                                                     tCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGc                                                             >  1:1150360/1‑140 (MQ=255)

                                                                     tCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGc                                                             >  1:1434105/1‑140 (MQ=255)

                                                                      cAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCt                                                            <  2:346676/140‑1 (MQ=255)

                                                                       aGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTg                                                           <  2:426375/140‑1 (MQ=255)

                                                                       aGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTg                                                           <  2:280938/140‑1 (MQ=255)

                                                                       aGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTg                                                           <  2:551156/140‑1 (MQ=255)

                                                                       aGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTg                                                           <  2:936844/140‑1 (MQ=255)

                                                                       aGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTg                                                           <  1:1494524/140‑1 (MQ=255)

                                                                       aGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTg                                                           <  2:108060/140‑1 (MQ=255)

                                                                       aGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTg                                                           <  1:1534256/140‑1 (MQ=255)

                                                                       aGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTg                                                           <  1:1100123/140‑1 (MQ=255)

                                                                       aGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTg                                                           <  2:1004570/140‑1 (MQ=255)

                                                                       aGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTg                                                           <  1:991157/140‑1 (MQ=255)

                                                                       aGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTg                                                           <  1:236769/140‑1 (MQ=255)

                                                                       aGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTg                                                           <  1:1117670/140‑1 (MQ=255)

                                                                             aCGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTcc                                                     <  1:1472639/140‑1 (MQ=255)

                                                                                aTGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCC‑CCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTggg                                                 <  1:1430720/140‑1 (MQ=255)

                                                                                 tGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTggg                                                 >  1:851467/1‑140 (MQ=255)

                                                                                        aaTGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCaa                                          <  1:1112123/140‑1 (MQ=255)

                                                                                        aaTGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCaa                                          <  2:1363471/140‑1 (MQ=255)

                                                                                        aaTGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCaa                                          >  1:103223/1‑140 (MQ=255)

                                                                                              aaTCGAAATCCAGAATAATATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTc                                    <  2:1218443/140‑1 (MQ=255)

                                                                                                      tCCAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTg                            <  2:1337744/140‑1 (MQ=255)

                                                                                                      cccAGAATAACATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGAGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTg                            <  2:1367794/139‑1 (MQ=255)

                                                                                                              aaCATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATc                    <  2:683944/140‑1 (MQ=255)

                                                                                                                cATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCg                  <  1:1315322/140‑1 (MQ=255)

                                                                                                                cATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCg                  <  1:489757/140‑1 (MQ=255)

                                                                                                                cATGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCg                  <  1:1335842/140‑1 (MQ=255)

                                                                                                                 aTGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCgg                 <  1:425322/140‑1 (MQ=255)

                                                                                                                 aTGCCCGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCgg                 <  2:851467/140‑1 (MQ=255)

                                                                                                                     ccGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGTAATGCGTCTGGCTTTGCGGCTATCCGGCATa             >  1:1568482/1‑140 (MQ=255)

                                                                                                                     ccGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATa             >  1:107024/1‑140 (MQ=255)

                                                                                                                     ccGCCTGGTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATa             >  1:984212/1‑140 (MQ=255)

                                                                                                                           ggTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGGGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAacac       <  1:386922/140‑1 (MQ=255)

                                                                                                                           ggTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGTTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAacac       <  2:1162326/140‑1 (MQ=255)

                                                                                                                           ggTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAacac       <  1:1215002/140‑1 (MQ=255)

                                                                                                                           ggTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAacac       <  1:882849/140‑1 (MQ=255)

                                                                                                                           ggTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAacac       <  1:918525/140‑1 (MQ=255)

                                                                                                                           ggTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAacac       <  2:1224681/140‑1 (MQ=255)

                                                                                                                           ggTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCAGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAacac       <  2:1256207/140‑1 (MQ=255)

                                                                                                                            gTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTCCGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACAcc      <  2:1411805/140‑1 (MQ=255)

                                                                                                                            gTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACAcc      <  1:163355/140‑1 (MQ=255)

                                                                                                                            gTGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACAcc      <  1:1254235/140‑1 (MQ=255)

                                                                                                                             tGCCAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCa     >  1:644009/1‑140 (MQ=255)

                                                                                                                                cAGTTGCGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTc  <  2:1286486/140‑1 (MQ=255)

CGTGAAATTGGGAAAAATCGCTATTCGTGACATCCATTAAATTGCGATTACGGGTGTAGTGCCAGAGGATCAGCGCCACGATGGCGAGAATGCCAATCGAAATCCAGAATAACATGCCCGCCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTC  >  NC_000913/3855715‑3855982

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`