Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,561,280	(A)7→6	coding (351/555 nt)	kptA →	RNA 2'‑phosphotransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,561,274	0	A	.	100.0%	282.6 / NA	64	coding (345/555 nt)	kptA	RNA 2'‑phosphotransferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (36/28);  total (36/28)

TTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGA  >  NC_000913/4561136‑4561409                                                                                                                                            |                                                                                                                                        ttttAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCTCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATaa                                                                                                                                        <  1:152279/140‑1 (MQ=255)           cccAGTGAGGGTGGGTGCATCCGCGGGGTTCGGGGGCTTTCGCCTTCGCAGGCCGCTTTTTCC‑TTTGCCGAAAAACCACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAgggg                                                                                                                             <  2:896280/139‑1 (MQ=255)           cccAGTGAGGGTGGGTGCACCCGCGCGGTTCGGGGGCATTCGACTTCGCGGGTCGCTTTTTCC‑TTTGCCAAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAgggg                                                                                                                             <  2:285253/139‑1 (MQ=255)             cAGTGATGGTAGGTGCATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCt                                                                                                                           <  1:816036/140‑1 (MQ=255)                tGATGGTAGGTGCATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGAt                                                                                                                        >  2:299200/1‑140 (MQ=255)                tGATGGTAGGTGCATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGAt                                                                                                                        >  2:599319/1‑140 (MQ=255)                         gTGCATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGa                                                                                                               >  2:304340/1‑140 (MQ=255)                          tccttCCGCGCGGTTCAGGGCCATTCGACTGCGCAGGTCCCTTTTTCC‑TTTGCCGAAAAACCTCCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAg                                                                                                              <  1:64251/136‑1 (MQ=255)                            cacccGCGCGGTTCGGGGGATTTCGACTCCGCAGGTCGTTTTTCCC‑TTTGCCAAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCg                                                                                                            <  2:155052/137‑1 (MQ=255)                             aTCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGt                                                                                                           >  2:192811/1‑140 (MQ=255)                              tCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTc                                                                                                          >  2:738650/1‑140 (MQ=255)                               ccGCGCGGTTCGGGGGCTTTCGACTTCGCGGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCa                                                                                                         <  2:13804/140‑1 (MQ=255)                               ccGCGCGGTTCAGGGGCATTCGCCTTCGCAGGTCGCTATTTCT‑TTGGCCAAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCa                                                                                                         <  2:789222/140‑1 (MQ=255)                               ccGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCa                                                                                                         <  1:225070/140‑1 (MQ=255)                               ccGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCa                                                                                                         >  1:384680/1‑140 (MQ=255)                                 gcgcgGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAACCACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACt                                                                                                       <  1:344591/140‑1 (MQ=255)                                 gcgcgGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACt                                                                                                       <  1:406394/140‑1 (MQ=255)                                  cgcgGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTa                                                                                                      >  2:487128/1‑140 (MQ=255)                                  cgcgGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTa                                                                                                      >  1:509140/1‑140 (MQ=255)                                    cgGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACg                                                                                                    >  2:225852/1‑140 (MQ=255)                                    cgGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACg                                                                                                    >  2:127862/1‑140 (MQ=255)                                       ttCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTAc                                                                                                 >  1:100167/1‑140 (MQ=255)                                             ggcttccGACTCCGCAGCGCCCTTTTTCC‑TTGGCCAAAAAACCCCCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACAtctct                                                                                           <  2:361216/134‑1 (MQ=255)                                                 ttCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTctgc                                                                                       >  2:308493/1‑140 (MQ=255)                                                 ttCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTctgc                                                                                       >  1:712313/1‑140 (MQ=255)                                                 ttCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTctgc                                                                                       >  1:268996/1‑140 (MQ=255)                                                 ttCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTctgc                                                                                       >  2:238909/1‑140 (MQ=255)                                                 ttCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTctgc                                                                                       >  1:228980/1‑140 (MQ=255)                                                 ttCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTctgc                                                                                       >  2:198791/1‑140 (MQ=255)                                                 ttCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTctgc                                                                                       >  1:982771/1‑140 (MQ=255)                                                 ttCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTctgc                                                                                       >  2:897413/1‑140 (MQ=255)                                                         cGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAg                                                                               <  1:238909/140‑1 (MQ=255)                                                           cAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCa                                                                             >  1:129189/1‑140 (MQ=255)                                                               tcgttttttCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACgg                                                                         <  2:994236/134‑1 (MQ=255)                                                               tCGCTTTTTCC‑TTTGCCAAAAAACCCCCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACgg                                                                         <  2:100167/140‑1 (MQ=255)                                                                 ggtATTACC‑TTTACCAAAAAACAACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCCCTACGTACATCTCTCTGCTGATGAAGCAACGGCa                                                                       <  2:174408/138‑1 (MQ=255)                                                                   tttttCC‑TTTGCAGAAAAAACGCCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACg                                                                     <  1:746962/138‑1 (MQ=255)                                                                    aTTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGc                                                                    <  1:487128/140‑1 (MQ=255)                                                                     tttCCTTTTGCCAAAAAACCACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGc                                                                    <  1:590785/140‑1 (MQ=255)                                                                               ccaaaaaacCACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAg                                                          <  2:508182/137‑1 (MQ=255)                                                                               ccGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAg                                                          <  1:127862/140‑1 (MQ=255)                                                                                         cccGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACgg                                                <  2:621916/139‑1 (MQ=255)                                                                                             ccACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCg                                            <  1:299200/140‑1 (MQ=255)                                                                                                 aGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCgg                                        <  1:690611/140‑1 (MQ=255)                                                                                                      ctctACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTAtt                                   >  1:790331/1‑140 (MQ=255)                                                                                                       tctACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTAttt                                  >  1:997756/1‑140 (MQ=255)                                                                                                         tACCACGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTa                                <  1:897413/140‑1 (MQ=255)                                                                                                             aCGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCg                            >  2:1035776/1‑140 (MQ=255)                                                                                                             aCGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCg                            >  2:853022/1‑140 (MQ=255)                                                                                                             aCGGTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCg                            >  2:114783/1‑140 (MQ=255)                                                                                                               ggTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACTGTc                          >  1:245713/1‑140 (MQ=255)                                                                                                               ggTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTc                          >  2:247/1‑140 (MQ=255)                                                                                                               ggTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTc                          >  2:50690/1‑140 (MQ=255)                                                                                                                gTACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCa                         <  1:749770/140‑1 (MQ=255)                                                                                                                 tACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCaa                        >  2:535663/1‑140 (MQ=255)                                                                                                                 tACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCaa                        >  2:198080/1‑140 (MQ=255)                                                                                                                 tACGGCAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCaa                        >  2:197884/1‑140 (MQ=255)                                                                                                                  aCGGCAAGCCGTTTCCGTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCaaa                       <  1:599319/140‑1 (MQ=255)                                                                                                                      cAAGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAAAGcac                   >  1:126492/1‑140 (MQ=255)                                                                                                                        aGCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAAAGCACAg                 >  1:308366/1‑140 (MQ=255)                                                                                                                         gCCGTTTCCTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAAAGCACAgg                >  1:538341/1‑140 (MQ=255)                                                                                                                                ccTTGACGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGc         >  1:887734/1‑140 (MQ=255)                                                                                                                                      cGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACg   >  2:236515/1‑140 (MQ=255)                                                                                                                                      cGAGAT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACg   <  2:887734/140‑1 (MQ=255)                                                                                                                                       gagaT‑AAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGa  <  1:192811/140‑1 (MQ=255)                                                                                                                                            |                                                                                                                                        TTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCC‑TTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGA  >  NC_000913/4561136‑4561409

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑