Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,007,752 T→C G81G (GGT→GGC)  ygeX → 2,3‑diaminopropionate ammonia‑lyase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,007,7520TC100.0% 154.7 / NA 41G81G (GGT→GGC) ygeX2,3‑diaminopropionate ammonia‑lyase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (19/22);  total (19/22)

AATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGTGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATGACTTTCGCGACCACCACCGACGGCAACCACGGGCGCGGT  >  NC_000913/3007623‑3007887
                                                                                                                                 |                                                                                                                                       
aaTAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCa                                                                                                                               <  2:997318/140‑1 (MQ=255)
 aTAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCAt                                                                                                                              <  2:824327/140‑1 (MQ=255)
 aTAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCAt                                                                                                                              <  1:66926/140‑1 (MQ=255)
  tAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAGACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATc                                                                                                                             <  2:546386/140‑1 (MQ=255)
   aGCTGGTTATCGCCCAACACCGCTTTGTGCGCTGGACGCTCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCg                                                                                                                            <  2:440614/140‑1 (MQ=255)
    gCTGGTTATCGCCCAACACCGCTTTGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGc                                                                                                                           >  2:940186/1‑140 (MQ=255)
          tATCGCCCAACACCGCTTTGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAatt                                                                                                                     >  1:199148/1‑140 (MQ=255)
                  aaCACCGCTTTGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATtgtgtg                                                                                                             >  2:575669/1‑140 (MQ=255)
                   acacCGCTTTGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGa                                                                                                            <  2:412060/140‑1 (MQ=255)
                   acacCGCTTTGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGa                                                                                                            <  1:7424/140‑1 (MQ=255)
                          tttGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGATTCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAatat                                                                                                     >  2:216606/1‑140 (MQ=255)
                          tttGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAatat                                                                                                     <  2:386877/140‑1 (MQ=255)
                           ttGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATatc                                                                                                    <  1:940186/140‑1 (MQ=255)
                              tgCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATatcatc                                                                                                 >  1:1023396/1‑140 (MQ=255)
                                  cTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGa                                                                                             <  1:874833/140‑1 (MQ=255)
                                     gACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGatat                                                                                          >  2:614741/1‑140 (MQ=255)
                                        gATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTAGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGa                                                                                       >  1:889428/1‑140 (MQ=255)
                                          tctcGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGaaa                                                                                     >  2:878393/1‑140 (MQ=255)
                                          tctcGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGaaa                                                                                     >  1:534065/1‑140 (MQ=255)
                                           ctcGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAAc                                                                                    <  1:847913/140‑1 (MQ=255)
                                                   ccTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCAt                                                                            <  1:688005/140‑1 (MQ=255)
                                                      ttttGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTg                                                                         >  1:970451/1‑140 (MQ=255)
                                                      ttttGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTg                                                                         >  1:624507/1‑140 (MQ=255)
                                                              tgAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTg                                                                 >  2:900284/1‑140 (MQ=255)
                                                              tgAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTg                                                                 <  2:13900/140‑1 (MQ=255)
                                                              tgAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTg                                                                 >  1:595474/1‑140 (MQ=255)
                                                                aagaaAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGaa                                                               >  2:339590/1‑140 (MQ=255)
                                                                          tcGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATc                                                     >  1:168650/1‑140 (MQ=255)
                                                                            gTCAAAGACGATTCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCgg                                                   <  1:216606/140‑1 (MQ=255)
                                                                                      aaTCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATg                                         >  2:766522/1‑140 (MQ=255)
                                                                                       aTCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATGa                                        >  1:867263/1‑140 (MQ=255)
                                                                                          aaaaCGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATGACtt                                     <  2:1023396/140‑1 (MQ=255)
                                                                                            aaCGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATGACTTTc                                   <  1:878393/140‑1 (MQ=255)
                                                                                               gATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATGACTTTcgcg                                <  1:642445/140‑1 (MQ=255)
                                                                                                      tCTGAACGCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATGACTTTCGCGaccacca                         <  1:853793/140‑1 (MQ=255)
                                                                                                             gCCTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATGACTTTCGCGACCACCACCGACgg                  <  2:18368/140‑1 (MQ=255)
                                                                                                               cTTCAAAATGCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATGACTTTCGCGACCACCACCGACGGCa                >  1:259250/1‑140 (MQ=255)
                                                                                                                        gCTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATGACTTTCGCGACCACCACCGACGGCAACCACGGgc       <  1:900284/140‑1 (MQ=255)
                                                                                                                         cTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATGACTTTCGCGACCACCACCGACGGCAACCACGGgcg      >  1:656589/1‑140 (MQ=255)
                                                                                                                         cTTGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATGACTTTCGCGACCACCACCGACGGCAACCACGGgcg      <  1:478937/140‑1 (MQ=255)
                                                                                                                           tGGCGGCGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATGACTTTCGCGACCACCACCGACGGCAACCACGGGcgcg    <  2:595474/140‑1 (MQ=255)
                                                                                                                             gcggcgCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGGTGTCATTTGAGCACCTGAAAAATGCCACCGGCGAAAAAATGACTTTCGCGACCACCACCGACGGCAACCACGGGCGCGgt  <  2:281349/140‑1 (MQ=255)
                                                                                                                                 |                                                                                                                                       
AATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGTGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATGACTTTCGCGACCACCACCGACGGCAACCACGGGCGCGGT  >  NC_000913/3007623‑3007887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑