Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	915,225	(C)5→4	intergenic (‑368/+127)	lysO ← / ← aqpZ	L‑lysine exporter/water channel AqpZ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	915,221	0	C	.	100.0%	270.1 / NA	70	intergenic (‑364/+131)	lysO/aqpZ	L‑lysine exporter/water channel AqpZ
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (27/43);  total (27/43)

GGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAAT  >  NC_000913/915087‑915356                                                                                                                                       |                                                                                                                                        ggCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGcccctg                                                                                                                                    >  2:1217396/1‑138 (MQ=17) ggCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGcccctg                                                                                                                                    >  2:720424/1‑138 (MQ=17) ggCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGcccctg                                                                                                                                    >  1:960621/1‑138 (MQ=17)     gAGGGCGGGTTTTACGGGGTTGTTCCCCCGCGCCCGCCCGGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTgcgcg                                                                                                                               <  1:1504858/140‑1 (MQ=11)     gAGGGCGCGTTTTACAGGGATGTTCCCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTgcgcg                                                                                                                               <  2:107868/140‑1 (MQ=12)      aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTTGGCCG‑CCCCTgcgcgc                                                                                                                              >  2:592409/1‑140 (MQ=12)      aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTgcgcgc                                                                                                                              >  1:1099508/1‑140 (MQ=17)      aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTgcgcgc                                                                                                                              >  1:618143/1‑140 (MQ=17)      aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTgcgcgc                                                                                                                              >  1:1454042/1‑140 (MQ=17)         gcgcGTTTTACGGGGATGTTCCCCCGCGCCCGCCCGGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTcc                                                                                                                           <  2:454848/140‑1 (MQ=11)          cgcgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCt                                                                                                                          <  1:596717/140‑1 (MQ=17)           gcgTTTTACAGGGATGTTACCTCGCGCCCGCCCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCtt                                                                                                                         <  1:115814/140‑1 (MQ=12)            cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTg                                                                                                                        >  2:1136262/1‑140 (MQ=17)              tttaagaGGGATGTTCCCTCGCGCCGGACCGGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTgcg                                                                                                                      <  2:898859/134‑1 (MQ=11)               tttACAGGGATGTTCCCTCGCGCCGGCCCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTgcgc                                                                                                                     <  1:1208679/140‑1 (MQ=11)               tttACAGGGATGTTCCCTCGCGCCCGCCCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTgcgc                                                                                                                     <  1:269503/140‑1 (MQ=255)               tttACAGGGATGTTACCTCGCGCCCGCCCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCGGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTgcgc                                                                                                                     <  2:1504282/140‑1 (MQ=255)                tcaCAGGGCTGTTACCGCGCGCCCGGCCGGGTAGCGGTAAGGGATAAGTCGAGGGCACGGCGCGGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGcc                                                                                                                    <  2:1022281/138‑1 (MQ=11)                         tGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGACACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAat                                                                                                           >  2:124440/1‑140 (MQ=255)                           ttACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGTGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAatat                                                                                                         >  1:856863/1‑140 (MQ=255)                           ttACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAatat                                                                                                         >  2:847444/1‑140 (MQ=255)                           ttACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAatat                                                                                                         >  2:878396/1‑140 (MQ=255)                           ttACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAatat                                                                                                         >  1:620449/1‑140 (MQ=255)                                 cgcgCCCGCCCAGGTAGCCGTAAGGGATAAGTCGAGGGCCCCGCGCAGCGGCGATTTTGTTCGCCAGCGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCt                                                                                                   <  2:1444690/140‑1 (MQ=14)                                 cgcgCCCGACCGGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCt                                                                                                   <  2:794608/140‑1 (MQ=255)                                 cgcgCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCt                                                                                                   >  1:10203/1‑140 (MQ=255)                                  gcgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt                                                                                                  <  2:618143/140‑1 (MQ=255)                                  gcgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt                                                                                                  >  2:936157/1‑140 (MQ=255)                                  gcgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt                                                                                                  >  1:736237/1‑140 (MQ=255)                                  gcccccGACCCGGTAGCCGTAAGGGATAAGTCGGGGGCACCGCGCGGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt                                                                                                  <  2:1028922/137‑1 (MQ=14)                                   cgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGGGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTa                                                                                                 >  1:1444690/1‑140 (MQ=255)                                    gcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAg                                                                                                <  1:720424/140‑1 (MQ=255)                                    gcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAg                                                                                                <  2:1371570/140‑1 (MQ=255)                                    gcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAg                                                                                                <  2:317514/140‑1 (MQ=255)                                       cGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTc                                                                                             >  1:686846/1‑140 (MQ=255)                                            cGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGaa                                                                                        <  1:1479254/140‑1 (MQ=255)                                               tAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAgg                                                                                     <  1:599105/140‑1 (MQ=255)                                                 gCCGTAGGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAgggg                                                                                   <  2:960621/140‑3 (MQ=255)                                                   cGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcg                                                                                 <  1:318691/140‑1 (MQ=255)                                                   cGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcg                                                                                 <  2:430572/140‑1 (MQ=255)                                                   cGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcg                                                                                 <  1:863649/140‑1 (MQ=255)                                                    gTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcgc                                                                                >  1:1217229/1‑140 (MQ=255)                                                    gTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcgc                                                                                >  2:321320/1‑140 (MQ=255)                                                             aaGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgatg                                                                       <  1:587697/140‑1 (MQ=255)                                                             aaGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgatg                                                                       >  2:175483/1‑140 (MQ=255)                                                              aGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgatga                                                                      <  1:1390036/140‑1 (MQ=255)                                                                   ggggCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt                                                                 <  2:61917/139‑1 (MQ=255)                                                                   aGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt                                                                 <  2:10203/140‑1 (MQ=255)                                                                   aGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt                                                                 >  2:395759/1‑140 (MQ=255)                                                                   aGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt                                                                 <  2:1454042/140‑1 (MQ=255)                                                                     ggCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCa                                                               >  2:718552/1‑140 (MQ=255)                                                                      acACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCaa                                                              <  1:124440/139‑1 (MQ=255)                                                                       cACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAAc                                                             <  1:638655/140‑1 (MQ=255)                                                                       cACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAAc                                                             >  2:1045823/1‑140 (MQ=255)                                                                        cccGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACa                                                            <  1:1045294/139‑1 (MQ=255)                                                                          cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACata                                                          >  2:1465534/1‑140 (MQ=255)                                                                          cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACata                                                          >  1:1419085/1‑140 (MQ=255)                                                                          cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACata                                                          >  2:1114237/1‑140 (MQ=255)                                                                          cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACata                                                          <  1:813811/140‑1 (MQ=255)                                                                               aGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATaaca                                                     <  2:1108631/140‑1 (MQ=255)                                                                                 cggcgATTTTGTTCGCCAGAGCCGGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATaacaac                                                   <  1:684406/140‑1 (MQ=255)                                                                                  ggcgATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAacaaca                                                  <  2:1406190/140‑1 (MQ=255)                                                                                           gTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaaaa                                         <  1:444405/140‑1 (MQ=255)                                                                                                  agagCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCt                                  <  1:878396/140‑1 (MQ=255)                                                                                                  agagCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCt                                  <  2:618573/140‑1 (MQ=255)                                                                                                      cccGGGGGTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACa                              <  1:718552/140‑1 (MQ=255)                                                                                                            ggTGCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGc                        <  1:1217396/140‑1 (MQ=255)                                                                                                              ggCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCa                      <  2:199307/139‑1 (MQ=255)                                                                                                               gCAGGGGGCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAg                     <  2:1344739/140‑1 (MQ=255)                                                                                                                  gggggCGGCGGCGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGcc                  >  1:254670/1‑140 (MQ=255)                                                                                                                     ggcggcggcGATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTc               >  1:476218/1‑140 (MQ=255)                                                                                                                        ggcggcgATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGc            >  2:726047/1‑140 (MQ=255)                                                                                                                         gcggcgATTGGCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCg           <  2:736237/140‑1 (MQ=255)                                                                                                                                  ggCCG‑CCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTtaattaat  <  2:1099508/140‑1 (MQ=255)                                                                                                                                       |                                                                                                                                        GGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAAT  >  NC_000913/915087‑915356

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑