| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,101,513 | (T)7→6 | intergenic (+83/‑177) | sodA → / → kdgT | superoxide dismutase (Mn)/2‑dehydro‑3‑deoxy‑D‑gluconate:H(+) symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,101,507 | 0 | T | . | 90.1% | 243.0 / 30.5 | 74 | intergenic (+77/‑183) | sodA/kdgT | superoxide dismutase (Mn)/2‑dehydro‑3‑deoxy‑D‑gluconate:H(+) symporter |
| Reads supporting (aligned to +/- strand): ref base T (3/0); major base . (17/47); minor base G (7/0); total (27/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.60e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGA > NC_000913/4101372‑4101644 | agTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGttttt > 2:1267119/1‑140 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGACGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATGTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGAGGtgttttt > 2:19724/1‑140 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGTGGTGGttttttg > 2:357811/1‑139 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGttttttt > 2:1384622/1‑140 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGttttttg < 2:275515/140‑2 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGgtttttt > 2:1119832/1‑140 (MQ=255) ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGgtttttg > 1:1298353/1‑139 (MQ=255) tCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGttttttgt < 1:1010512/140‑3 (MQ=255) cTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGttttttgtg < 2:447999/140‑4 (MQ=255) ggAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGAt < 1:867635/140‑1 (MQ=255) cGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAAt > 1:492742/1‑140 (MQ=255) cGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑GTTTTTGTGATCAAt > 2:1411668/1‑140 (MQ=255) aCTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAAt < 1:696906/140‑1 (MQ=255) aCTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAAt < 2:308411/140‑1 (MQ=255) tGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATaa < 1:250029/140‑1 (MQ=255) gggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATaaa < 2:664190/140‑1 (MQ=255) gggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATaaa < 2:1202167/140‑1 (MQ=255) ggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATaaaa > 1:1333313/1‑140 (MQ=255) ggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑GTTTTTGTGGTCAAATTCAAAATaaaa > 2:394452/1‑140 (MQ=255) ggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGG‑GGGGTTTTTGTGATCAAATTCAaaaaaaaa > 2:1359071/1‑140 (MQ=255) gACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGGTTTTTT‑TGGTCAATTTCAAAATaaaaa > 2:11615/1‑140 (MQ=255) aaGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGG‑GGGGTTTTTGTGGTCAATTTTAAAATAAAAACaaa > 2:668855/1‑139 (MQ=255) gcagcGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGGTTTTTT‑TGGTCAAATTCAAAAAAAAAACAAAGa > 2:105483/1‑140 (MQ=255) cagcGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGAt < 2:148931/140‑1 (MQ=255) cagcGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑GTTTTTGTGATCAATTTCAAAAAAAAAAAAAAGAt > 2:819542/1‑140 (MQ=255) gcGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGGTTTTTT‑TGATCAATTTCAAAATAAAAAAAAAGATcc > 2:371634/1‑140 (MQ=255) cGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCg > 1:234889/1‑140 (MQ=255) ggCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑GTTTTTGTGATCAATTTCAAAATAAAAACAAAGAACCgg > 2:331141/1‑139 (MQ=255) gCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGat < 1:104733/140‑1 (MQ=255) gCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGat < 1:1267420/140‑1 (MQ=255) aCGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGataa < 1:1057630/140‑1 (MQ=255) tGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTCAAAATAAAAACAATGATCCGataaaaata > 1:125735/1‑140 (MQ=255) gcgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACa < 1:1439907/140‑1 (MQ=255) cgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAg < 1:270820/140‑1 (MQ=255) cgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAg < 2:712907/140‑1 (MQ=255) aaaaaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGGTTTTTT‑TGGTCAAATTTCAAATAAAAAAAAAGAACCGATAAAAATAAAAAAGCg > 2:1445297/1‑140 (MQ=255) aaaaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGTTTTTTT‑TGGTTAATTTCAAAATAAAAAAAAAGAACCGgtaaaaataaaaaaacgg > 1:1459144/1‑134 (MQ=255) aaaaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGt < 1:1384622/140‑1 (MQ=255) aaaaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGt < 2:492742/140‑1 (MQ=255) aataatCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTc < 1:1383639/140‑1 (MQ=255) tCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTg < 2:749881/140‑1 (MQ=255) aTTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGTGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAt < 1:357811/140‑1 (MQ=255) tGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtgtg < 1:31955/140‑1 (MQ=255) ccgccTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGt < 1:1436161/140‑1 (MQ=255) cgccTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGtt < 2:590488/140‑1 (MQ=255) ctgctgCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTg < 1:331141/140‑1 (MQ=255) gctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGAt < 1:1245055/140‑1 (MQ=255) gctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGAt < 2:280231/140‑1 (MQ=255) gctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGAt < 2:767209/140‑1 (MQ=255) tgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCa < 1:680894/140‑1 (MQ=255) tgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCa < 1:1094745/140‑1 (MQ=255) gAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGGTTTTTT‑TGATCCATTTTTAAAAAAAAAAAAATAGCCAAAAAAAATAAAAAAGCGGTTGTATTTATGGGGGTTTTATCTAttttt > 2:1010120/1‑139 (MQ=255) gAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTa < 2:110043/140‑1 (MQ=255) gAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTa < 2:535862/140‑1 (MQ=255) gAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTa < 2:234889/140‑1 (MQ=255) aGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑GTTTTTGTGATCAATTTCAAAATAAAAACAAAGATCCGATAAAAATAAAACAGCGGTTCAATTGATGTGGGTTTGATCACTTTTAt > 2:786289/1‑140 (MQ=255) gCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAAAAATGATCCGATAAAAAAAAAAAAGCGTTTCAATTTATGTGGTTTTGATTACTttttttt > 2:1404896/1‑139 (MQ=255) gCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑GTTTTTGTGGTCAATTTCAAAATAAAAAAAATGATCCGATAAAAATAAAACAACGTTTCAATTGATGTGGGTTTTATCACTttttttt > 1:939988/1‑139 (MQ=255) cGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGa > 1:95755/1‑140 (MQ=255) cGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑GTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGa > 1:561360/1‑140 (MQ=255) gTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGAt < 1:473355/140‑1 (MQ=255) taGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTaa < 2:1034149/140‑1 (MQ=255) cGCATATCAGCTTAAAAAATTGACCCTTCGCAACGGGCGGGGGTTTTTTTG‑GGTAAATTTAAAAAAAAAAACAAAAAACCGAAAAAAAAAAAAAAGGGTTTAAATTTATGGGGTTTTTTTCCCTTTTTTTTTTTAaataa > 2:182425/1‑138 (MQ=255) cGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGTTTTTTT‑TGATCAATTTTAAAATAAAAAAAAAAATCCGATAAAAATAAAAAAGCGTTTCAATTGATGTGGGTTTTGTTACTTTTATTGATTAaatgaa > 2:105829/1‑140 (MQ=255) cGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAGCAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaatgaa < 1:394452/140‑1 (MQ=255) cGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑GTTTTTGTGATCAATTTTAAAATAAAAACAAAGATCCGATAAAAATAAAAAAGCGTTTCAATTGATGTGGGTTTGTTCACTTTTATTTATTAaatgaa > 2:757226/1‑140 (MQ=255) atatCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGt > 1:664795/1‑140 (MQ=255) aaaaa‑TGATCCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGtt < 1:371634/140‑1 (MQ=255) aaaaa‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGtt < 1:1389198/140‑1 (MQ=255) aaaaa‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGtt < 2:1333313/140‑1 (MQ=255) aaaaa‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGtt < 1:1267119/140‑1 (MQ=255) aa‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTcc < 2:1298353/140‑1 (MQ=255) aa‑TGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTcc < 1:1010120/140‑1 (MQ=255) tGAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCAt < 2:285177/140‑1 (MQ=255) gAACCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATc < 2:1142182/140‑1 (MQ=255) gAACCATCGCCAACGGCGGTGG‑GTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGGTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATc > 1:172328/1‑140 (MQ=255) gAACCATCGCCAACGGCGGTGG‑GTTTTTGTGATCAATTTCAAAATAAAAACAAAGATCCGATAAAAATAAAACAGCGTTTCAATTTATGTGGGTTTTATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATc > 2:611469/1‑140 (MQ=255) aaCCATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCa < 1:11615/140‑1 (MQ=255) ccATCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAac < 2:28664/140‑1 (MQ=255) aTCGCCAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAacac < 1:83248/140‑1 (MQ=255) tCGCCAACGGCGGTGG‑GTTTTTGTGATCAATTTTAAAATAAAAACAAAGATCCGATAAAAATAAAAAAGCGTTTCAATTGATGGGGTTTTTATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAacacc > 2:567663/1‑139 (MQ=255) cAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATg < 2:664795/140‑1 (MQ=255) cAACGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATg < 1:468987/140‑1 (MQ=255) aCGGCGGTGG‑TTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCt < 2:939988/140‑1 (MQ=255) cggcggTGGGTTTTTT‑TGATCAATTTCAAAATAAAAACAAAGATCCGATAAAAAAAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTc > 2:1125841/1‑140 (MQ=255) tggtTTTTTT‑TGGTCAATTTCAAAATAAAAACAAAGAACCGATAAAAAAAAAACAGCGGTTCAAATGATGTGGTTTTGGTCACCTTTTTTGATTAAATGAATGGCTATCTTCGTTTCCCTCAACACTGATGCTCCATTGa > 2:973803/1‑140 (MQ=255) | AGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAA‑TGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGA > NC_000913/4101372‑4101644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |