| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,586,594 | (G)6→7 | coding (168/3513 nt) | hsdR ← | type I restriction enzyme EcoKI endonuclease component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,586,588 | 1 | . | G | 98.2% | 405.7 / ‑0.3 | 109 | coding (174/3513 nt) | hsdR | type I restriction enzyme EcoKI endonuclease component |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base G (64/43); total (66/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.54e-01 | |||||||||||
Only 100 of 131 total aligned reads displayed.
GGGCATCGTTGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑A‑GGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATAAGTGAAGTCGTTG > NC_000913/4586449‑4586723 | gggCATCGTTGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACa‑a < 1:500540/140‑1 (MQ=255)gggCATCGTTGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACa‑a < 1:456689/140‑1 (MQ=255) gCATCGTTGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑A‑gg > 1:1242341/1‑140 (MQ=255) aTCGTTGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑A‑gggg < 2:879828/140‑1 (MQ=255) tCGTTGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑A‑ggggg < 2:1607/140‑1 (MQ=255) gTTGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑A‑ggggggg < 1:936429/140‑2 (MQ=255) gTTGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑A‑ggggggg < 1:820756/140‑2 (MQ=255) ttGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑A‑ggggggga > 1:679507/1‑138 (MQ=255) ttGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑A‑ggggggga > 2:793549/1‑138 (MQ=255) ttGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑A‑ggggggga < 2:423372/140‑3 (MQ=255) ttGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑A‑ggggggga < 2:224853/140‑3 (MQ=255) ttGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑A‑ggggggga < 1:1391546/140‑3 (MQ=255) ttGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑A‑ggggggga < 2:541274/140‑3 (MQ=255) ttGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑A‑ggggggga < 2:58740/140‑3 (MQ=255) gaTCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGtt < 1:845218/140‑1 (MQ=255) gaTCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGtt < 2:161463/140‑1 (MQ=255) gTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGt > 1:554560/1‑140 (MQ=255) ttATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTa > 1:68108/1‑140 (MQ=255) tATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTaa < 1:985225/140‑1 (MQ=255) tATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTaa > 2:1492263/1‑140 (MQ=255) gATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAg > 2:123455/1‑140 (MQ=255) atTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGAcc > 2:441842/1‑140 (MQ=255) ttCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCa > 1:1187896/1‑140 (MQ=255) cGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑A‑GGGGGGATGTTGAGTAACAGACCAAGa > 2:1191255/1‑140 (MQ=255) gTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGa > 2:571015/1‑140 (MQ=255) cACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGt > 1:52259/1‑140 (MQ=255) ccGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGttt > 1:387119/1‑140 (MQ=255) ccGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGttt > 2:1353462/1‑140 (MQ=255) gCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCg > 1:626501/1‑140 (MQ=255) gCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCg > 2:742818/1‑140 (MQ=255) ccTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGc > 1:563969/1‑140 (MQ=255) ccTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGc > 2:1322951/1‑140 (MQ=255) ccTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGc > 2:1301926/1‑140 (MQ=255) ccTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGc > 1:834189/1‑140 (MQ=255) ccTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGc > 1:21733/1‑140 (MQ=255) ccTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGc > 1:307702/1‑140 (MQ=255) tGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCtg > 2:2548/1‑140 (MQ=255) tACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGc < 2:1289708/140‑1 (MQ=255) tACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGc < 2:535528/140‑1 (MQ=255) aTGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTTATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGc < 2:1023465/140‑1 (MQ=255) aTGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGc > 2:463309/1‑140 (MQ=255) tGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGcc > 2:1481933/1‑140 (MQ=255) tGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGcc > 1:1158279/1‑140 (MQ=255) cggcgTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCaa > 1:1243914/1‑140 (MQ=255) cggcgTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCaa > 2:1304509/1‑140 (MQ=255) ggcgTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCaaa > 1:270348/1‑140 (MQ=255) ggcgTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCaaa > 2:1077032/1‑140 (MQ=255) ggcgTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCaaa < 1:1104114/140‑1 (MQ=255) cgTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACa > 2:743110/1‑140 (MQ=255) cgTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACa > 2:610732/1‑140 (MQ=255) aCAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGGTGCTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCa > 2:185994/1‑140 (MQ=255) aCAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCa < 2:1187896/140‑1 (MQ=255) gagagGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGcg < 2:1401272/140‑1 (MQ=255) gagagGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGcg < 2:694122/140‑1 (MQ=255) gagagGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGcg < 2:368480/140‑1 (MQ=255) gagagGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGcg < 2:113665/140‑1 (MQ=255) gagagGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGcg < 1:1304509/140‑1 (MQ=255) gagagGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGcg < 1:1329956/140‑1 (MQ=255) gagagGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGcg < 1:1353462/140‑1 (MQ=255) gagagGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGcg < 2:879149/140‑1 (MQ=255) gagagGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGcg < 1:323291/140‑1 (MQ=255) gagagGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGcg < 1:954284/140‑1 (MQ=255) agagGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGcgt < 2:759094/140‑1 (MQ=255) gagGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGcgtc < 2:1448390/140‑1 (MQ=255) gagGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGcgtc < 1:743110/140‑1 (MQ=255) tgtCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTggg > 2:56964/1‑140 (MQ=255) gtCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACa‑a < 2:104366/58‑1 (MQ=255) gtCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACa‑a > 1:104366/1‑58 (MQ=255) tcatcaACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGat < 1:763082/140‑1 (MQ=255) tcaACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGatcat > 1:1462713/1‑140 (MQ=255) tcaACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGatcat < 1:1481933/140‑1 (MQ=255) caaAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCgg > 2:1308158/1‑140 (MQ=255) caaAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCgg > 2:1375636/1‑140 (MQ=255) aaaGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCggg < 1:441842/140‑1 (MQ=255) aGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACATG‑GGGGGGGAGTTGAGTAACAGACCAAGATGATTCGCTGCGGCTTCGCAAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTa > 2:1346818/1‑140 (MQ=255) aGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTa > 2:284431/1‑140 (MQ=255) gATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTa < 2:679507/140‑1 (MQ=255) aTTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTAt > 2:1407827/1‑140 (MQ=255) ccGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTccg < 1:571015/140‑1 (MQ=255) ccGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTccg < 2:821908/140‑1 (MQ=255) ttCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGca > 1:914748/1‑140 (MQ=255) ttCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGca < 2:496737/140‑1 (MQ=255) ttCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGca < 1:1193064/140‑1 (MQ=255) ttCACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGca < 1:56964/140‑1 (MQ=255) cACGCAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGcaca < 1:1492263/140‑1 (MQ=255) cAGGAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCg < 2:270348/140‑1 (MQ=255) ggAGATCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGAt > 2:77760/1‑140 (MQ=255) gagaTCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATg > 2:453008/1‑140 (MQ=255) agaTCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATgg > 1:300298/1‑140 (MQ=255) gaTCGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGc < 2:307702/140‑1 (MQ=255) cGTGTTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATa > 2:918262/1‑140 (MQ=255) gtTGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATAAGt > 1:1263298/1‑140 (MQ=255) ttGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATAAGTg < 2:1221710/140‑1 (MQ=255) tGATTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATAAGTGa > 1:690684/1‑140 (MQ=255) aTTCTCACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATAAGTGAAg > 2:1414321/1‑140 (MQ=255) tctcACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATAAGTGAAGTc > 1:228103/1‑140 (MQ=255) tctcACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATAAGTGAAGTc < 1:1077032/140‑1 (MQ=255) ctcACA‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATAAGTGAAGTCg > 1:1081544/1‑140 (MQ=255) caca‑AGGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATAAGTGAAGTCGtt > 2:645071/1‑140 (MQ=255) caca‑A‑GGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATAAGTGAAGTCGTTg > 1:736526/1‑140 (MQ=255) | GGGCATCGTTGAGATCGTTATGATATTCGTGCACCGCCTGGTTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACA‑A‑GGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATAAGTGAAGTCGTTG > NC_000913/4586449‑4586723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |