BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	2,857,096	Δ2,538 bp	coding (4‑2541/2562 nt)	mutS →	DNA mismatch repair protein MutS

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2857096	2859633	2538	134 [0]	[0] 134	mutS	DNA mismatch repair protein MutS

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2857095	0 (0.000)	134 (1.480)	69/278	0.1	100%	coding (3/2562 nt)	mutS	DNA mismatch repair protein MutS
*	?	NC_000913	2859634 =	0 (0.000)	134 (1.480)	69/278	0.1	100%	coding (2542/2562 nt)	mutS	DNA mismatch repair protein MutS

Only 100 of 134 total aligned reads displayed.

CCAGCATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATGGGTGATTTTTATGAACTGTTTTATGACGACGCAAAACGCGCG  >  NC_000913/2856960‑2857233

ccAGCATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgct                                                                                                                                        >  1:661879‑M1/1‑136 (MQ=255)

   gCATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAATTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttga                                                                                                                                     <  2:1146019‑M1/140‑8 (MQ=255)

   gCATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttga                                                                                                                                     <  2:227563‑M1/140‑8 (MQ=255)

    cATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaa                                                                                                                                    <  2:177553‑M1/140‑9 (MQ=255)

    cATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaa                                                                                                                                    <  1:795139‑M1/140‑9 (MQ=255)

    cATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaa                                                                                                                                    <  1:1197202‑M1/140‑9 (MQ=255)

         aGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcc                                                                                                                               >  1:1039240‑M1/1‑127 (MQ=255)

         aGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcc                                                                                                                               <  2:1228441‑M1/140‑14 (MQ=255)

         aGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcc                                                                                                                               >  1:530276‑M1/1‑127 (MQ=255)

         aGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcc                                                                                                                               <  1:508045‑M1/140‑14 (MQ=255)

          gAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcct                                                                                                                              <  1:105494‑M1/140‑15 (MQ=255)

          gAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcct                                                                                                                              <  2:776858‑M1/140‑15 (MQ=255)

          gAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcct                                                                                                                              <  1:594355‑M1/140‑15 (MQ=255)

            aCTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctgg                                                                                                                            <  1:958919‑M1/140‑17 (MQ=255)

            aCTCGCCGTTCGCTTCTTCCCCAGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAGACCATCACACCCCATTTAATATCAGAGAACCGGACATAACCCCATGcgcttgaagagcttgg                                                                                                                            <  2:398431‑M1/140‑17 (MQ=255)

                              ccccTGAAATGATTAACTCCGGTATCATGTTCGGCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccga                                                                                                          <  2:985606‑M1/140‑35 (MQ=255)

                              ccccTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccga                                                                                                          >  2:225470‑M1/1‑106 (MQ=255)

                              ccccTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccga                                                                                                          <  1:1444692‑M1/140‑35 (MQ=255)

                                   gAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtc                                                                                                     <  1:976982‑M1/140‑40 (MQ=255)

                                        gATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttg                                                                                                <  2:1396000‑M1/140‑45 (MQ=255)

                                         aTTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgc                                                                                               >  2:308149‑M1/1‑95 (MQ=255)

                                             aCTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatc                                                                                           >  1:70300‑M1/1‑91 (MQ=255)

                                              cTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGCACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcg                                                                                          >  2:1408543‑M1/1‑90 (MQ=255)

                                              cTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcg                                                                                          >  1:783627‑M1/1‑90 (MQ=255)

                                               tCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgg                                                                                         <  1:506245‑M1/140‑52 (MQ=255)

                                                ccGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcggg                                                                                        <  1:168833‑M1/140‑53 (MQ=255)

                                                ccGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcggg                                                                                        <  2:747484‑M1/140‑53 (MQ=255)

                                                   gTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaat                                                                                     >  2:72624‑M1/1‑85 (MQ=255)

                                                   gTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaat                                                                                     >  2:1507336‑M1/1‑85 (MQ=255)

                                                         tgtgCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaac                                                                               >  2:926043‑M1/1‑79 (MQ=255)

                                                         tgtgCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaac                                                                               <  2:730126‑M1/140‑62 (MQ=255)

                                                         tgtgCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaac                                                                               >  1:378432‑M1/1‑79 (MQ=255)

                                                           tgCGCCTTATGTGATTACAACGAAGATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacga                                                                             >  2:1130062‑M1/1‑77 (MQ=255)

                                                           tgCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacga                                                                             >  2:667160‑M1/1‑77 (MQ=255)

                                                             cgcCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgaca                                                                           >  2:406046‑M1/1‑75 (MQ=255)

                                                              gcCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaa                                                                          >  1:114376‑M1/1‑74 (MQ=255)

                                                                   aTGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgac                                                                     >  1:1005105‑M1/1‑69 (MQ=255)

                                                                    tgtgATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacg                                                                    >  1:1226716‑M1/1‑68 (MQ=255)

                                                                       gATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaat                                                                 <  2:1054100‑M1/140‑76 (MQ=255)

                                                                        aTTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaata                                                                >  1:1284671‑M1/1‑64 (MQ=255)

                                                                        aTTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaata                                                                <  1:741076‑M1/140‑77 (MQ=255)

                                                                          tACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaa                                                              >  1:536786‑M1/1‑62 (MQ=255)

                                                                          tACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaa                                                              >  2:534821‑M1/1‑62 (MQ=255)

                                                                           aCAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaa                                                             <  1:1110763‑M1/140‑80 (MQ=255)

                                                                           aCAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaa                                                             <  2:1005105‑M1/140‑80 (MQ=255)

                                                                            cAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaat                                                            >  1:1494794‑M1/1‑60 (MQ=255)

                                                                              aCGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataa                                                          >  2:146976‑M1/1‑58 (MQ=255)

                                                                              aCGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataa                                                          >  2:165278‑M1/1‑58 (MQ=255)

                                                                               cGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaa                                                         >  2:175113‑M1/1‑57 (MQ=255)

                                                                               cGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaa                                                         <  2:987511‑M1/140‑84 (MQ=255)

                                                                               cGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaa                                                         >  1:608704‑M1/1‑57 (MQ=255)

                                                                                gAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaa                                                        <  1:643341‑M1/140‑85 (MQ=255)

                                                                                gAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaa                                                        <  2:1345379‑M1/140‑85 (MQ=255)

                                                                                gAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaa                                                        <  2:124726‑M1/140‑85 (MQ=255)

                                                                                   aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaaca                                                     <  1:308149‑M1/140‑88 (MQ=255)

                                                                                   aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaaca                                                     <  2:26370‑M1/140‑88 (MQ=255)

                                                                                   aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaaca                                                     <  1:711821‑M1/140‑88 (MQ=255)

                                                                                   aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaaca                                                     <  2:1172231‑M1/140‑88 (MQ=255)

                                                                                   aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaaca                                                     <  1:234169‑M1/140‑88 (MQ=255)

                                                                                   aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaaca                                                     <  2:88680‑M1/140‑88 (MQ=255)

                                                                                    aTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacac                                                    <  1:923558‑M1/140‑89 (MQ=255)

                                                                                     tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATATCCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacacc                                                   <  2:590960‑M1/140‑90 (MQ=255)

                                                                                     tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacacc                                                   <  1:247229‑M1/140‑90 (MQ=255)

                                                                                     tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacacc                                                   <  1:1130062‑M1/140‑90 (MQ=255)

                                                                                     tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacacc                                                   <  2:294096‑M1/140‑90 (MQ=255)

                                                                                     tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacacc                                                   <  2:1387234‑M1/140‑90 (MQ=255)

                                                                                     tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacacc                                                   <  1:406046‑M1/140‑90 (MQ=255)

                                                                                       aaaaCCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccct                                                 <  2:1455383‑M1/140‑92 (MQ=255)

                                                                                        aaaCCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctg                                                <  2:530276‑M1/140‑93 (MQ=255)

                                                                                                    cccATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaatagaaacaccctgtataataggaaa                                    <  1:675097‑M1/140‑105 (MQ=255)

                                                                                                    cccATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaa                                    >  2:11346‑M1/1‑36 (MQ=255)

                                                                                                             tatCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttatttt                           >  1:1372257‑M1/1‑27 (MQ=255)

                                                                                                              atCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacgccctgtataataggaaagcttatttta                          <  1:1359849‑M1/140‑115 (MQ=255)

                                                                                                              atCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttatttta                          >  2:239725‑M1/1‑26 (MQ=255)

                                                                                                              atCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttatttta                          >  1:953666‑M1/1‑26 (MQ=255)

                                                                                                              atCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttatttta                          >  1:803097‑M1/1‑26 (MQ=255)

                                                                                                              atCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttatttta                          <  2:1043246‑M1/140‑115 (MQ=255)

                                                                                                               tCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttac                         <  2:1039240‑M1/140‑116 (MQ=255)

                                                                                                               tCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttac                         <  1:1503178‑M1/140‑116 (MQ=255)

                                                                                                                cAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttaca                        >  2:1118418‑M1/1‑24 (MQ=255)

                                                                                                                  gggAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagg                      >  1:387946‑M1/1‑22 (MQ=255)

                                                                                                                  gggAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagg                      >  2:730312‑M1/1‑22 (MQ=255)

                                                                                                                  gggAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagg                      >  1:923264‑M1/1‑22 (MQ=255)

                                                                                                                            cATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccat            <  2:378432‑M1/140‑129 (MQ=255)

                                                                                                                            cATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccat            <  2:661879‑M1/140‑129 (MQ=255)

                                                                                                                             aTAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatg           >  1:1338943‑M1/1‑11 (MQ=255)

                                                                                                                             aTAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatg           <  1:815640‑M1/140‑130 (MQ=255)

                                                                                                                             aTAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatg           <  1:555452‑M1/140‑130 (MQ=255)

                                                                                                                              tAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacacctgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatgc          <  2:1284671‑M1/140‑131 (MQ=255)

                                                                                                                              tAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatgc          <  1:926043‑M1/140‑131 (MQ=255)

                                                                                                                               aaCCCCATGcgcttgaagagcctggtgtaataacaattgccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatgcc         <  1:174335‑M1/140‑132 (MQ=255)

                                                                                                                               aaCCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatgtc         >  1:1281283‑M1/1‑9 (MQ=255)

                                                                                                                               aaCCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatgcc         >  2:881457‑M1/1‑9 (MQ=255)

                                                                                                                               aaCCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatgcc         <  1:440202‑M1/140‑132 (MQ=255)

                                                                                                                                 ccccATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatgccat       >  1:1051761‑M1/1‑7 (MQ=255)

                                                                                                                                     aTGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatgccatctac   >  1:1037077‑M1/1‑3 (MQ=255)

                                                                                                                                     aTGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatgccatctac   >  1:950995‑M1/1‑3 (MQ=255)

                                                                                                                                      tGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatgccatctaca  <  2:803097‑M1/140‑139 (MQ=255)

                                                                                                                                      tGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatgccatctaca  <  2:536786‑M1/140‑139 (MQ=255)

                                                                                                                                      tGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatgccatctaca  >  1:201255‑M1/1‑2 (MQ=255)

CCAGCATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATGGGTGATTTTTATGAACTGTTTTATGACGACGCAAAACGCGCG  >  NC_000913/2856960‑2857233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`