BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	123,000	T→C	intergenic (+144/‑17)	pdhR → / → aceE	DNA‑binding transcriptional dual regulator PdhR/pyruvate dehydrogenase E1 component

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	123,000	0	T	C	100.0%	372.0 / NA	96	intergenic (+144/‑17)	pdhR/aceE	DNA‑binding transcriptional dual regulator PdhR/pyruvate dehydrogenase E1 component
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (43/53); total (43/53)

Only 100 of 104 total aligned reads displayed.

CTGGTAAAAATTATCCAGAAGATGTTGTAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGATAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACT  >  NC_000913/122865‑123135

cTGGTAAATATTATCCAGAAGATGTTGTAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTagacagat                                                                                                                                     <  1:1365352/140‑1 (MQ=255)

 tGGTAAAAATTATCCAGAAGATGTTGTAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAgacagata                                                                                                                                    <  2:315520/140‑1 (MQ=255)

 tGGTAAAAATTATCCAGAAGATGTTGTAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAgacagata                                                                                                                                    <  2:18537/140‑1 (MQ=255)

 tGGTAAAAATTATCCAGAAGATGTTGTAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAgacagata                                                                                                                                    <  1:1439315/140‑1 (MQ=255)

      aaaaTTATCCAGAAGATGTTGTAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGaa                                                                                                                               <  2:497528/140‑1 (MQ=255)

           tATCCAGAAGATGTTGTAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAAcc                                                                                                                          <  2:20679/140‑1 (MQ=255)

           tATCCAGAAGATGTTGTAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAAcc                                                                                                                          <  1:454151/140‑1 (MQ=255)

           tATCCAGAAGATGTTGTAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAAcc                                                                                                                          <  1:1257492/140‑1 (MQ=255)

            aTCCAGAAGATGTTGTAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAAccc                                                                                                                         <  2:469036/140‑1 (MQ=255)

             tCCAGAAGATGTTGTAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCa                                                                                                                        >  1:1309188/1‑140 (MQ=255)

                  aagaTGTTGTAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCa                                                                                                                   >  1:14230/1‑140 (MQ=255)

                       gttgtAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGaa                                                                                                                               <  1:428573/123‑1 (MQ=255)

                       gttgtAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGaa                                                                                                                               >  2:428573/1‑123 (MQ=255)

                       gttgtAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACg                                                                                                              <  1:1050797/140‑1 (MQ=255)

                       gttgtAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACg                                                                                                              >  1:1349314/1‑140 (MQ=255)

                        ttgtAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGt                                                                                                             <  1:1311200/140‑1 (MQ=255)

                        ttgtAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGt                                                                                                             <  1:1132494/140‑1 (MQ=255)

                          gtAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGttt                                                                                                           <  2:1373924/140‑1 (MQ=255)

                           tAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTc                                                                                                          >  1:1136861/1‑140 (MQ=255)

                               tCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCaa                                                                                                      <  1:1181469/140‑1 (MQ=255)

                                cAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCaaa                                                                                                     >  2:183821/1‑140 (MQ=255)

                                cAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCaaa                                                                                                     <  1:15076/140‑1 (MQ=255)

                                 aaGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAAt                                                                                                    <  1:1307535/140‑1 (MQ=255)

                                  aGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATg                                                                                                   >  1:225347/1‑140 (MQ=255)

                                  aGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATg                                                                                                   >  2:509526/1‑140 (MQ=255)

                                  aGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATg                                                                                                   >  1:1528932/1‑140 (MQ=255)

                                  aGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATg                                                                                                   >  2:243337/1‑140 (MQ=255)

                                   gcgcATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGa                                                                                                  >  2:263804/1‑140 (MQ=255)

                                          taAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGAt                                                                                           <  2:1125900/140‑1 (MQ=255)

                                          taAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGAt                                                                                           <  1:627857/140‑1 (MQ=255)

                                             aaGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCg                                                                                        >  1:615271/1‑140 (MQ=255)

                                              aGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGa                                                                                       >  2:743732/1‑140 (MQ=255)

                                              aGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGa                                                                                       >  2:1171552/1‑140 (MQ=255)

                                                  cgGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGa                                                                                   >  2:1004735/1‑140 (MQ=255)

                                                  cgGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGa                                                                                   >  1:719188/1‑140 (MQ=255)

                                                   ggCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGaa                                                                                  >  2:1028052/1‑140 (MQ=255)

                                                   ggCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGaa                                                                                  >  2:526699/1‑140 (MQ=255)

                                                   ggCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGaa                                                                                  >  2:556980/1‑140 (MQ=255)

                                                    gCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGaaa                                                                                 >  2:274365/1‑140 (MQ=255)

                                                           aaCGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGa                                                                          <  2:676896/140‑1 (MQ=255)

                                                             cGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACt                                                                        <  1:183821/140‑1 (MQ=255)

                                                               tAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTgg                                                                      <  1:787357/140‑1 (MQ=255)

                                                                 gAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCt                                                                    >  1:153536/1‑140 (MQ=255)

                                                                 gAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACT‑AACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTc                                                                   >  2:884799/1‑140 (MQ=255)

                                                                  aaCCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTc                                                                   >  2:1068030/1‑140 (MQ=255)

                                                                  aaCCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTc                                                                   >  1:246545/1‑140 (MQ=255)

                                                                     cTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAg                                                                <  1:1496701/140‑1 (MQ=255)

                                                                      tGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAgg                                                               <  1:263804/140‑1 (MQ=255)

                                                                       gTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGc                                                              >  2:364839/1‑140 (MQ=255)

                                                                        tCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCg                                                             >  2:627911/1‑140 (MQ=255)

                                                                        tCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCg                                                             >  1:853081/1‑140 (MQ=255)

                                                                        tCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCg                                                             >  1:821435/1‑140 (MQ=255)

                                                                        tCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCg                                                             >  1:575044/1‑140 (MQ=255)

                                                                         cTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGa                                                            <  1:509526/140‑1 (MQ=255)

                                                                               gAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAAt                                                      <  1:129063/140‑1 (MQ=255)

                                                                                  cTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCgg                                                   >  1:962769/1‑140 (MQ=255)

                                                                                   tttCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATATCCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGt                                                  <  2:14230/140‑1 (MQ=255)

                                                                                     tCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCa                                                >  2:688681/1‑140 (MQ=255)

                                                                                       cGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAGCGTTATTAGACAGATAAGGAATATCCCAGGTCAGAACGTTTCACAAAAGACGTGGATCCGATCGAAACGCGCGACTGGCTCCAGGCGATCGAATCGGTCATc                                              <  1:327589/140‑1 (MQ=255)

                                                                                       cGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATc                                              <  2:719188/140‑1 (MQ=255)

                                                                                        ggCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGTCGTGGATCCGATCGAAACCCGCGACTGGCTCCAGGCGATCAAATCGGTCATcc                                             <  2:679615/140‑1 (MQ=255)

                                                                                          cGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGt                                           >  2:863698/1‑140 (MQ=255)

                                                                                               gTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTgaaga                                      <  1:959014/140‑1 (MQ=255)

                                                                                               gTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTgaaga                                      >  1:458790/1‑140 (MQ=255)

                                                                                                ttCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATATCCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTgaagaa                                     >  2:534864/1‑140 (MQ=255)

                                                                                                     tGGGACAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGgtgt                                <  2:1309188/140‑1 (MQ=255)

                                                                                                          cAGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGc                           >  2:859333/1‑140 (MQ=255)

                                                                                                           aGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCg                          <  2:274936/140‑1 (MQ=255)

                                                                                                           aGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCg                          <  2:380116/140‑1 (MQ=255)

                                                                                                           aGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCg                          <  1:1028052/140‑1 (MQ=255)

                                                                                                           aGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCg                          <  2:1381101/140‑1 (MQ=255)

                                                                                                           aGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCg                          >  1:1185596/1‑140 (MQ=255)

                                                                                                           aGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCg                          <  1:243337/140‑1 (MQ=255)

                                                                                                           aGGTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCg                          <  1:364839/140‑1 (MQ=255)

                                                                                                             gTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTg                        <  1:1405622/140‑1 (MQ=255)

                                                                                                             gTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTg                        >  1:765233/1‑140 (MQ=255)

                                                                                                             gTTCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTg                        <  1:688681/140‑1 (MQ=255)

                                                                                                               tCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCt                      <  1:743732/140‑1 (MQ=255)

                                                                                                               tCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCt                      <  1:1068030/140‑1 (MQ=255)

                                                                                                               tCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCt                      <  1:1171552/140‑1 (MQ=255)

                                                                                                               tCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCt                      <  2:853081/140‑1 (MQ=255)

                                                                                                               tCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCt                      <  2:225347/140‑1 (MQ=255)

                                                                                                               tCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCt                      <  2:789142/140‑1 (MQ=255)

                                                                                                               tCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCt                      <  1:1004735/140‑1 (MQ=255)

                                                                                                               tCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCt                      <  2:113152/140‑1 (MQ=255)

                                                                                                               tCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCt                      <  2:1136861/140‑1 (MQ=255)

                                                                                                               tCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCt                      <  2:1149890/140‑1 (MQ=255)

                                                                                                               tCCAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCt                      <  2:69986/140‑1 (MQ=255)

                                                                                                                ccAGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTc                     >  1:896374/1‑140 (MQ=255)

                                                                                                                  aGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGgtgt                                >  2:663102/1‑127 (MQ=255)

                                                                                                                  aGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGgtgt                                <  1:663102/127‑1 (MQ=255)

                                                                                                                  aGAAAACTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAg                   >  2:1325933/1‑140 (MQ=255)

                                                                                                                    aaaaCTCAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTa                 <  2:615271/140‑1 (MQ=255)

                                                                                                                         tCAACGTTATTAGACAGATAAGGAATAACCCATGTGAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGa            >  1:628670/1‑140 (MQ=255)

                                                                                                                          cAACGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGAt           <  1:627911/140‑1 (MQ=255)

                                                                                                                           aaCGTTATTAGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATc          >  2:1085914/1‑140 (MQ=255)

                                                                                                                               ttattaGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGAcc      <  1:863698/140‑1 (MQ=255)

                                                                                                                                tattaGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCa     <  2:962769/140‑1 (MQ=255)

                                                                                                                                  ttaGACAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAAc   >  1:1098646/1‑140 (MQ=255)

                                                                                                                                   tagacagaTAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACt  <  1:859333/140‑1 (MQ=255)

CTGGTAAAAATTATCCAGAAGATGTTGTAAATCAAGCGCATATAAAAGCGCGGCAACTAAACGTAGAACCTGTCTTATTGAGCTTTCCGGCGAGAGTTCAATGGGACAGGTTCCAGAAAACTCAACGTTATTAGATAGATAAGGAATAACCCATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACT  >  NC_000913/122865‑123135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`