BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,341,528	A→G	Y324C (TAC→TGC)	lapB →	lipopolysaccharide assembly protein B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,341,528	0	A	G	100.0%	395.2 / NA	103	Y324C (TAC→TGC)	lapB	lipopolysaccharide assembly protein B
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (60/43); total (60/43)

Only 100 of 103 total aligned reads displayed.

CACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGG  >  NC_000913/1341394‑1341664

cacCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACt                                                                                                                                     >  2:903813/1‑140 (MQ=255)

     gTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAAt                                                                                                                                >  1:1504725/1‑140 (MQ=255)

     gTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAAt                                                                                                                                >  1:1485959/1‑140 (MQ=255)

      tGCCGATGCTGAATTGATGCTTGCTGATGTCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATg                                                                                                                               >  1:1256158/1‑140 (MQ=255)

       gCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGa                                                                                                                              <  1:120004/140‑1 (MQ=255)

        ccGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGaa                                                                                                                             >  2:307353/1‑140 (MQ=255)

         cGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAg                                                                                                                            <  2:678869/140‑1 (MQ=255)

         cGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAg                                                                                                                            <  2:1236584/140‑1 (MQ=255)

         cGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAg                                                                                                                            <  2:1058515/140‑1 (MQ=255)

           aTGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCg                                                                                                                          <  2:709018/140‑1 (MQ=255)

             gCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGga                                                                                                                        >  1:175254/1‑140 (MQ=255)

                 aaTTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGa                                                                                                                              >  2:1488989/1‑130 (MQ=255)

                 aaTTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGa                                                                                                                              <  1:1488989/130‑1 (MQ=255)

                   ttGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAgg                                                                                                                  <  1:1451643/140‑1 (MQ=255)

                      aTGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCg                                                                                                               >  1:1273193/1‑140 (MQ=255)

                      aTGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCg                                                                                                               >  1:559984/1‑140 (MQ=255)

                      aTGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCg                                                                                                               >  2:1050634/1‑140 (MQ=255)

                        gcttgctGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTg                                                                                                             >  1:699388/1‑140 (MQ=255)

                             ctGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCaaa                                                                                                        <  1:870329/140‑1 (MQ=255)

                               gATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAaga                                                                                                      <  1:631094/140‑1 (MQ=255)

                                atatCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAagag                                                                                                     >  1:351144/1‑140 (MQ=255)

                                atatCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAagag                                                                                                     <  2:1273193/140‑1 (MQ=255)

                                 tatCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAagaga                                                                                                    >  1:793283/1‑140 (MQ=255)

                                  atcatcGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAagagag                                                                                                   <  1:200469/140‑1 (MQ=255)

                                  atcatcGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAagagag                                                                                                   <  2:1318739/140‑1 (MQ=255)

                                    catcGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGcc                                                                                                 >  1:1467603/1‑140 (MQ=255)

                                       cGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGa                                                                                              <  1:1489354/140‑1 (MQ=255)

                                       cGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGa                                                                                              <  1:307353/140‑1 (MQ=255)

                                          aGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATgg                                                                                           >  2:1309093/1‑140 (MQ=255)

                                            cgcgcgACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGtg                                                                                         <  1:29224/140‑1 (MQ=255)

                                              cgcgACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGtgct                                                                                       >  1:47707/1‑140 (MQ=255)

                                              cgcgACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGtgct                                                                                       >  1:818694/1‑140 (MQ=255)

                                                 gACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCg                                                                                    <  2:158945/140‑1 (MQ=255)

                                                         tGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATgg                                                                            >  1:530122/1‑140 (MQ=255)

                                                         tGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATgg                                                                            >  1:1209574/1‑140 (MQ=255)

                                                          gAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGt                                                                           <  2:12855/140‑1 (MQ=255)

                                                             gCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTgg                                                                        >  1:856274/1‑140 (MQ=255)

                                                             gCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGGTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTgg                                                                        >  2:1117408/1‑140 (MQ=255)

                                                               cGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCg                                                                      <  1:1077878/140‑1 (MQ=255)

                                                                 cacaGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCgag                                                                    <  1:1065364/140‑1 (MQ=255)

                                                                  acaGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCgaga                                                                   >  2:811868/1‑140 (MQ=255)

                                                                  acaGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCgaga                                                                   <  2:458290/140‑1 (MQ=255)

                                                                  acaGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCgaga                                                                   >  1:1414644/1‑140 (MQ=255)

                                                                  acaGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCgaga                                                                   <  1:848458/140‑1 (MQ=255)

                                                                    aGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGTTGCGTGACATGGTTGGCGAGAAg                                                                 <  2:1485959/140‑1 (MQ=255)

                                                                     ggTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAgg                                                                >  2:1377937/1‑140 (MQ=255)

                                                                       tCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTa                                                              <  1:184080/140‑1 (MQ=255)

                                                                       tCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTa                                                              <  1:975092/140‑1 (MQ=255)

                                                                          atatTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACgt                                                           <  2:352197/140‑1 (MQ=255)

                                                                              tACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACgtagta                                                       >  2:90738/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  2:103142/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  1:1085800/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  1:1101895/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  1:1289106/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  2:78515/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  2:1272465/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  1:251765/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  2:1481322/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  1:261952/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  1:328108/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  2:655940/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  2:542292/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  1:434657/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  2:1051483/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  2:384950/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  2:167543/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg                                                     >  2:279747/1‑140 (MQ=255)

                                                                                cgcgCCAGCTTCAGCGTCATCCGACCATGCGTGTGGTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGGAGTAAg                                                     >  2:918580/1‑140 (MQ=255)

                                                                                   gcCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGaa                                                                  <  2:669779/124‑1 (MQ=255)

                                                                                   gcCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGaa                                                                  >  1:669779/1‑124 (MQ=255)

                                                                                     cAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCg                                                >  2:113662/1‑140 (MQ=255)

                                                                                     cAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCg                                                >  2:1124301/1‑140 (MQ=255)

                                                                                     cAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCg                                                >  2:269164/1‑140 (MQ=255)

                                                                                               gTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCGCTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGc                                      <  1:961842/140‑1 (MQ=255)

                                                                                                   tCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGa                                  >  1:128829/1‑140 (MQ=255)

                                                                                                   tCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGa                                  >  1:202024/1‑140 (MQ=255)

                                                                                                   tCCGACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGa                                  >  2:1091226/1‑140 (MQ=255)

                                                                                                      gACCATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTAGGCGAGAAGGTACGTAGTTAGCCTCGTTATCGTTGCCAGAAAt                               <  1:903813/140‑1 (MQ=255)

                                                                                                        ccATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAAtgt                             >  1:1033607/1‑140 (MQ=255)

                                                                                                        ccATGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAAtgt                             >  2:245930/1‑140 (MQ=255)

                                                                                                           tGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTAGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGt                          >  1:1523287/1‑140 (MQ=255)

                                                                                                           tGCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGCTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGt                          >  1:228958/1‑140 (MQ=255)

                                                                                                            gCGTGTGTTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGtt                         <  2:760870/140‑1 (MQ=255)

                                                                                                                gtgtTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTAc                     <  2:856274/140‑1 (MQ=255)

                                                                                                                gtgtTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTAc                     <  1:344550/140‑1 (MQ=255)

                                                                                                                 tgtTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTAcc                    <  2:1504725/140‑1 (MQ=255)

                                                                                                                  gtTCCATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCg                   <  2:559984/140‑1 (MQ=255)

                                                                                                                     ccATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCAt                <  1:1230466/140‑1 (MQ=255)

                                                                                                                      cATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATa               >  2:1428222/1‑140 (MQ=255)

                                                                                                                      cATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATa               <  2:261952/140‑1 (MQ=255)

                                                                                                                      cATAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATa               <  2:328108/140‑1 (MQ=255)

                                                                                                                       aTAAGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATac              >  1:363043/1‑140 (MQ=255)

                                                                                                                          aGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACAcc           <  2:1209574/140‑1 (MQ=255)

                                                                                                                          aGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACAcc           <  1:90738/140‑1 (MQ=255)

                                                                                                                          aGTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACAcc           <  2:251765/140‑1 (MQ=255)

                                                                                                                           gTTAATGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACAccc          >  1:795206/1‑140 (MQ=255)

                                                                                                                              aaTGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCctct       >  2:226367/1‑140 (MQ=255)

                                                                                                                               aTGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTa      <  2:1516782/140‑1 (MQ=255)

                                                                                                                               aTGGATTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTa      <  1:1051483/140‑1 (MQ=255)

                                                                                                                                   aTTGCCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTgg  <  2:1033607/140‑1 (MQ=255)

CACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGG  >  NC_000913/1341394‑1341664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`