| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,109,385 | G→A | A67V (GCA→GTA) | rfbX ← | polyisoprenol‑linked O‑antigen repeat unit flippase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,109,385 | 0 | G | A | 99.1% | 378.5 / ‑4.4 | 108 | A67V (GCA→GTA) | rfbX | polyisoprenol‑linked O‑antigen repeat unit flippase |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (36/71); total (36/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
TCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAA > NC_000913/2109250‑2109519 | tCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACtgt < 2:581963/140‑1 (MQ=255)tCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACtgt < 1:258480/140‑1 (MQ=255)tCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACtgt < 2:1451355/140‑1 (MQ=255)tCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACtgt < 2:782004/140‑1 (MQ=255) cAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACtgtg > 2:918094/1‑140 (MQ=255) aGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTga < 1:1262417/140‑1 (MQ=255) caagcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTg < 2:1040644/140‑1 (MQ=255) caagcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTg < 2:826977/140‑1 (MQ=255) agcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGaa > 1:857136/1‑140 (MQ=255) agcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGaa > 1:443876/1‑140 (MQ=255) agcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGaa > 1:434332/1‑140 (MQ=255) agcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGaa > 2:1255026/1‑140 (MQ=255) agcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGaa > 1:1132517/1‑140 (MQ=255) gcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGaaa > 1:759208/1‑140 (MQ=255) gcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGaaa < 2:809537/140‑1 (MQ=255) gTCATCGACGTTAAGAAAATCAATGTAGTGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCata < 1:1459875/140‑1 (MQ=255) gTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCata > 2:753241/1‑140 (MQ=255) gTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCata < 2:414112/140‑1 (MQ=255) cGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTcaa < 2:276823/140‑1 (MQ=255) cGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTcaa > 2:454740/1‑140 (MQ=255) gTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCaacaaa < 1:689938/140‑1 (MQ=255) gTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATCCaacaaa < 2:497710/140‑1 (MQ=255) tAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCaacaaaca < 2:673828/140‑1 (MQ=255) tAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCaacaaaca < 1:1434380/140‑1 (MQ=255) tAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCaacaaaca < 1:1285603/140‑1 (MQ=255) tAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCaacaaaca < 2:431197/140‑1 (MQ=255) tAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCaacaaaca < 1:1131761/140‑1 (MQ=255) tAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCaacaaaca < 2:660025/140‑1 (MQ=255) tAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCaacaaaca < 2:1152945/140‑1 (MQ=255) tAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCaacaaaca < 1:1126285/140‑1 (MQ=255) tAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCaacaaaca < 1:1099143/140‑1 (MQ=255) tAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAAAAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCaacaaaca < 1:1009841/140‑1 (MQ=255) aGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACAtt < 2:409351/140‑1 (MQ=255) gAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTa < 2:1280967/140‑1 (MQ=255) gAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTa < 1:1470774/140‑1 (MQ=255) gAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTa < 2:302692/140‑1 (MQ=255) aaaaTCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTAt < 2:762595/140‑1 (MQ=255) aaaTCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATc < 1:235317/140‑1 (MQ=255) aaaTCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATc < 1:1514525/140‑1 (MQ=255) aaaTCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATc < 1:949445/140‑1 (MQ=255) aaaTCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATc < 2:776339/140‑1 (MQ=255) aTCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCat > 2:1288518/1‑140 (MQ=255) aTCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCat > 2:1524872/1‑140 (MQ=255) tCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCata < 1:320824/140‑1 (MQ=255) tCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCata < 1:787693/140‑1 (MQ=255) tGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCAtatata > 2:1362385/1‑140 (MQ=255) tGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATa > 2:535669/1‑140 (MQ=255) aTAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGc > 2:473755/1‑140 (MQ=255) aTAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGc < 1:1330520/140‑1 (MQ=255) aTAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGc > 2:867811/1‑140 (MQ=255) aaGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCtt > 2:830435/1‑140 (MQ=255) aGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTg > 2:849242/1‑140 (MQ=255) gAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTgg > 1:1356700/1‑140 (MQ=255) aaCTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGc < 1:653397/140‑1 (MQ=255) cTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCaa > 2:1438257/1‑140 (MQ=255) aTTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCaaaa > 2:1145525/1‑140 (MQ=255) gAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGaa > 1:1355267/1‑140 (MQ=255) aCCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGaa < 1:1490804/140‑1 (MQ=255) cGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAAt > 1:936303/1‑140 (MQ=255) cccAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAAttt > 1:719132/1‑140 (MQ=255) ccAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAAtttt < 2:1463587/140‑1 (MQ=255) cAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTc < 2:1339158/140‑1 (MQ=255) cGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAgtg < 2:118963/140‑1 (MQ=255) gTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAgtgt < 1:1206511/140‑1 (MQ=255) gTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAgtgt < 1:1145525/140‑1 (MQ=255) gTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAgtgt < 1:867811/140‑1 (MQ=255) ttACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGtt < 2:540665/140‑1 (MQ=255) ttACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGtt < 2:1023403/140‑1 (MQ=255) tttATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTa < 1:344324/140‑1 (MQ=255) ttATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTAc < 1:849242/140‑1 (MQ=255) ttATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTAc < 1:335892/140‑1 (MQ=255) ttATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTAc < 1:473755/140‑1 (MQ=255) tATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAATCCGAATATACCGAAAATTTCAGGACCAAGTGTTCTTACa < 1:1362183/140‑1 (MQ=255) tATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACa < 1:1465262/140‑1 (MQ=255) tATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACa < 1:1456561/140‑1 (MQ=255) tATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACa < 1:454740/140‑1 (MQ=255) tATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACa < 2:111669/140‑1 (MQ=255) tATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACa < 1:476508/140‑1 (MQ=255) tCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAg > 1:1512721/1‑128 (MQ=255) tCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAg < 2:1512721/128‑1 (MQ=255) aCTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATg < 2:408057/140‑1 (MQ=255) aCTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATg > 1:1026572/1‑140 (MQ=255) aCTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATg > 1:766296/1‑140 (MQ=255) aCTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATg > 1:1228136/1‑140 (MQ=255) aCTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATg < 1:1255026/140‑1 (MQ=255) aCTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATg > 1:702040/1‑140 (MQ=255) aCTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATg < 2:1355267/140‑1 (MQ=255) cTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATgg < 2:107026/140‑1 (MQ=255) cTATCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATgg < 2:443876/140‑1 (MQ=255) aTCTGCTGCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGaa < 1:830435/140‑1 (MQ=255) ctgctgCTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAAt > 1:48695/1‑140 (MQ=255) tgctgcTTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATg > 2:1352303/1‑140 (MQ=255) gctgctTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGt > 1:548904/1‑140 (MQ=255) ctTTGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGc < 1:756350/140‑1 (MQ=255) tttGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCa < 1:918094/140‑1 (MQ=255) tGGCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAAt > 2:268714/1‑140 (MQ=255) gCAATACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATgg < 1:2854/140‑1 (MQ=255) aaTACTCTGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTa < 2:575674/140‑1 (MQ=255) ctGAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGAt < 1:482464/140‑1 (MQ=255) gAGTTACTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATaa > 2:508072/1‑140 (MQ=255) | TCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAA > NC_000913/2109250‑2109519 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |