BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,654,208	T→C	E242E (GAA→GAG)	sseB ←	protein SseB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,654,208	0	T	C	100.0%	364.0 / NA	95	E242E (GAA→GAG)	sseB	protein SseB
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (45/50); total (45/50)

GGAGTCTCTCCGGCGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGTTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATTTCTT  >  NC_000913/2654071‑2654344

ggAGTCTCTCCGGCGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTc                                                                                                                                         >  1:1057633/1‑140 (MQ=255)

 gAGTCTCTCCGGCGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCa                                                                                                                                        >  1:558271/1‑140 (MQ=255)

 gAGTCTCTCCGGCGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCa                                                                                                                                        >  1:164970/1‑140 (MQ=255)

  aGTCTCTCCGGCGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCAt                                                                                                                                       >  1:474184/1‑140 (MQ=255)

  aGTCTCTCCGGCGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCAt                                                                                                                                       >  2:471330/1‑140 (MQ=255)

     ctctcCGGCGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGa                                                                                                                                    <  2:1097527/140‑1 (MQ=255)

     ctctcCGGCGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGa                                                                                                                                    <  1:340142/140‑1 (MQ=255)

      tctcCGGCGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGaa                                                                                                                                   <  2:317568/140‑1 (MQ=255)

      tctcCGGCGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGaa                                                                                                                                   <  1:697010/140‑1 (MQ=255)

      tctcCGGCGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGaa                                                                                                                                   <  1:829290/140‑1 (MQ=255)

             cGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCa                                                                                                                            >  2:19730/1‑140 (MQ=255)

             cGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCa                                                                                                                            <  1:1263283/140‑1 (MQ=255)

             cGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCa                                                                                                                            <  2:846379/140‑1 (MQ=255)

             cGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCa                                                                                                                            <  1:570217/140‑1 (MQ=255)

             cGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCa                                                                                                                            <  2:1014391/140‑1 (MQ=255)

               aCAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAat                                                                                                                          <  1:343556/140‑1 (MQ=255)

                cAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAata                                                                                                                         <  2:750015/140‑1 (MQ=255)

                  aTTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATg                                                                                                                       <  2:861091/140‑1 (MQ=255)

                  aTTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATg                                                                                                                       <  2:812810/140‑1 (MQ=255)

                  aTTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATg                                                                                                                       <  1:193251/140‑1 (MQ=255)

                     tACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTc                                                                                                                    <  2:1296330/140‑1 (MQ=255)

                         ggtggtTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGta                                                                                                                <  1:154204/140‑1 (MQ=255)

                          gtggtTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGtaa                                                                                                               <  2:51300/140‑1 (MQ=255)

                           tggtTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGtaat                                                                                                              >  1:257236/1‑140 (MQ=255)

                           tggtTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGtaaa                                                                                                              >  1:722508/1‑139 (MQ=255)

                             gtTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGtaataa                                                                                                            >  1:804190/1‑140 (MQ=255)

                             gtTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGtaataa                                                                                                            >  1:782924/1‑140 (MQ=255)

                             gtTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGtaataa                                                                                                            >  2:1364975/1‑140 (MQ=255)

                              ttAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATaaa                                                                                                           >  2:1242817/1‑140 (MQ=255)

                               tAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAg                                                                                                          <  2:1274145/140‑1 (MQ=255)

                               tAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAg                                                                                                          >  1:130225/1‑140 (MQ=255)

                                 acaacCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTg                                                                                                        >  1:259353/1‑140 (MQ=255)

                                       ttCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAAt                                                                                                  <  2:973641/140‑1 (MQ=255)

                                          agagCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTcc                                                                                               >  1:134432/1‑140 (MQ=255)

                                                 caAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTcc                                                                                        >  1:523786/1‑140 (MQ=255)

                                                 caAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTcc                                                                                        >  1:1249072/1‑140 (MQ=255)

                                                   aGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTcccc                                                                                      >  2:1181895/1‑140 (MQ=255)

                                                          ccGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTc                                                                              <  1:121352/140‑1 (MQ=255)

                                                           cGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCa                                                                             >  1:1155946/1‑140 (MQ=255)

                                                           cGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCa                                                                             >  1:358076/1‑140 (MQ=255)

                                                           cGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCa                                                                             >  1:588976/1‑140 (MQ=255)

                                                            gAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCAc                                                                            <  2:1332334/140‑1 (MQ=255)

                                                              aTGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCt                                                                          <  1:437138/140‑1 (MQ=255)

                                                                     ccTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAat                                                                   <  1:1242817/140‑1 (MQ=255)

                                                                           ggcggcATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGAt                                                             <  2:1430041/140‑1 (MQ=255)

                                                                           ggcggcATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGAt                                                             <  1:890338/140‑1 (MQ=255)

                                                                            gcggcATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGAtt                                                            <  2:460788/140‑1 (MQ=255)

                                                                                cATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGtt                                                        <  2:558271/140‑1 (MQ=255)

                                                                                cATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGtt                                                        <  2:1487583/140‑1 (MQ=255)

                                                                                    ttttAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATc                                                    <  2:1482811/140‑1 (MQ=255)

                                                                                    ttttAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCA‑CCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCg                                                   <  1:757705/140‑1 (MQ=255)

                                                                                       tAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCCTTTTTTTCACCTGACAAATATCGATTGGTTCATCGc                                                  <  2:904811/140‑1 (MQ=255)

                                                                                       tAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGcc                                                 <  2:474184/140‑1 (MQ=255)

                                                                                       tAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGcc                                                 <  1:1364975/140‑1 (MQ=255)

                                                                                       tAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGcc                                                 <  1:546540/140‑1 (MQ=255)

                                                                                       tAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGcc                                                 <  2:1104550/140‑1 (MQ=255)

                                                                                       tAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGcc                                                 <  2:164970/140‑1 (MQ=255)

                                                                                       tAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGcc                                                 <  1:1137947/140‑1 (MQ=255)

                                                                                       tAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGcc                                                 <  1:281344/140‑1 (MQ=255)

                                                                                          aTTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAgg                                              >  2:657737/1‑140 (MQ=255)

                                                                                           ttATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGt                                             <  1:1271554/140‑1 (MQ=255)

                                                                                            tATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTa                                            >  2:805576/1‑140 (MQ=255)

                                                                                             aTCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTaa                                           >  1:1014611/1‑140 (MQ=255)

                                                                                             aTCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTaa                                           >  1:453152/1‑140 (MQ=255)

                                                                                             aTCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTaa                                           >  1:103814/1‑140 (MQ=255)

                                                                                              tCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAAt                                          >  1:1292513/1‑140 (MQ=255)

                                                                                              tCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAAt                                          >  2:92478/1‑140 (MQ=255)

                                                                                              tCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAAt                                          >  2:922859/1‑140 (MQ=255)

                                                                                              tCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAAt                                          >  1:43295/1‑140 (MQ=255)

                                                                                              tCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAAt                                          >  2:828902/1‑140 (MQ=255)

                                                                                              tCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAAt                                          >  2:634697/1‑140 (MQ=255)

                                                                                              tCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAAt                                          >  1:1480428/1‑140 (MQ=255)

                                                                                               ccGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATg                                         >  1:1400708/1‑140 (MQ=255)

                                                                                                   ttCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATc                                     <  1:560964/140‑1 (MQ=255)

                                                                                                   ttCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATc                                     <  1:296205/140‑1 (MQ=255)

                                                                                                   ttCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATc                                     >  1:1189934/1‑140 (MQ=255)

                                                                                                   ttCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATc                                     <  1:599765/140‑1 (MQ=255)

                                                                                                   ttCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAAATCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATc                                     <  2:235685/140‑1 (MQ=255)

                                                                                                    tCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCg                                    >  2:563067/1‑140 (MQ=255)

                                                                                                       gTTTAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTc                                 <  2:270904/140‑1 (MQ=255)

                                                                                                        tttAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCg                                <  2:1249072/140‑1 (MQ=255)

                                                                                                        tttAAAGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCg                                >  1:672711/1‑140 (MQ=255)

                                                                                                             aGTCACGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTaca                           >  2:1203515/1‑140 (MQ=255)

                                                                                                                  cGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTcc                      >  2:1439314/1‑140 (MQ=255)

                                                                                                                  cGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTcc                      >  2:699357/1‑140 (MQ=255)

                                                                                                                  cGCAAAAAACCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTcc                      >  1:560418/1‑140 (MQ=255)

                                                                                                                       aaaaCCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCg                 >  1:150532/1‑140 (MQ=255)

                                                                                                                       aaaaCCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCg                 >  1:622328/1‑140 (MQ=255)

                                                                                                                        aaaCCACCCCAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGc                <  2:782924/140‑1 (MQ=255)

                                                                                                                               cccAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGaata         >  1:212160/1‑140 (MQ=255)

                                                                                                                               cccAGCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGaata         >  1:1170778/1‑140 (MQ=255)

                                                                                                                                   gCGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAAttt     >  2:786560/1‑140 (MQ=255)

                                                                                                                                    cGACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATttc    <  2:134432/140‑1 (MQ=255)

                                                                                                                                     gACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATttct   <  2:1155946/140‑1 (MQ=255)

                                                                                                                                     gACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATttct   <  2:1189934/140‑1 (MQ=255)

                                                                                                                                     gACGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATttct   <  1:1471026/140‑1 (MQ=255)

                                                                                                                                      aCGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATttctt  <  2:804190/140‑1 (MQ=255)

                                                                                                                                      aCGCTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATttctt  <  2:648493/140‑1 (MQ=255)

GGAGTCTCTCCGGCGACAATTTACTGGTGGTTAACAACCTTCAGAGCAGCAAGTAAGCCCGAATGCCGCCCTTTGGGCGGCATATTTTAGATTATCCGATTCTGTTTAAAGTCACGCAAAAAACCACCCCAGCGACGTTCATAGAATGGCGCAATATGTTCGGTAATAAAGTGGCTAATTCCTTTTTCCCC‑TTTTTTCACCTGACAAATATCGATTGGTTCATCGCCAGGTAATGTATCGGTCGCTACACTTCCCGTCGCCTGAATAATTTCTT  >  NC_000913/2654071‑2654344

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`