Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,976,578	T→C	intergenic (‑193/‑21)	omrB ← / → galR	small regulatory RNA OmrB/DNA‑binding transcriptional dual regulator GalR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,976,578	0	T	C	100.0%	248.7 / NA	66	intergenic (‑193/‑21)	omrB/galR	small regulatory RNA OmrB/DNA‑binding transcriptional dual regulator GalR
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (22/44);  total (22/44)

TTTCGCAAAGTGTAACCAAAGGTTTGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGTTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCGGCTGGCTGTGCA  >  NC_000913/2976441‑2976708                                                                                                                                          |                                                                                                                                   tttCGCAAAGTGTAACCAAAGGTTTGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGctt                                                                                                                                  >  2:326912/1‑140 (MQ=255) tttCGCAAAGTGTAACCAAAGGTTTGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGctt                                                                                                                                  >  1:1085787/1‑140 (MQ=255)   tCGCAAAGTGTAACCAAAGGTTTGCAATCTCTTTTTTTGCCTTACTATTTGGCGTTTGGCTAACATTCCCAGGATGAAACCCGGCCACCCCTTAAACAAAGGGCCGTTTTCCGAAAACTTGAAAAAATGAAAGGGttacc                                                                                                                                >  2:1450280/1‑137 (MQ=255)    cGCAAAGTGTAACCAAAGGTTTGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTAcc                                                                                                                               <  1:927946/140‑1 (MQ=255)      cAAAGTGTAACCAAAGGTTTGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCa                                                                                                                             >  2:1389813/1‑140 (MQ=255)        aaGTGTAACCAAAGGTTTGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACt                                                                                                                           <  2:1070084/140‑1 (MQ=255)         aGTGTAACCAAAGGTTTGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTa                                                                                                                          <  1:90867/140‑1 (MQ=255)            gtAACCAAAGGTTTGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCGCCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAgg                                                                                                                       <  2:682303/140‑1 (MQ=255)              aaCCAAAGGTTTGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTa                                                                                                                     >  1:1160338/1‑140 (MQ=255)                    aGGTTTGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCa                                                                                                               >  2:90016/1‑140 (MQ=255)                     ggTTTGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTAcc                                                                                                                               <  2:349031/123‑1 (MQ=255)                     ggTTTGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTAcc                                                                                                                               >  1:349031/1‑123 (MQ=255)                     ggTTTGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCAt                                                                                                              >  1:938116/1‑140 (MQ=255)                      gTTTGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATg                                                                                                             <  2:391202/140‑1 (MQ=255)                       tttGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATgg                                                                                                            <  1:573148/140‑1 (MQ=255)                       tttGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATgg                                                                                                            <  2:387450/140‑1 (MQ=255)                        ttGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGc                                                                                                           <  1:1389813/140‑1 (MQ=255)                        ttGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGc                                                                                                           <  1:239692/140‑1 (MQ=255)                         tGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCg                                                                                                          <  2:1095439/140‑1 (MQ=255)                         tGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCg                                                                                                          >  2:1085273/1‑140 (MQ=255)                         tGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCg                                                                                                          >  2:40787/1‑140 (MQ=255)                          gCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTTACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGa                                                                                                         >  2:381298/1‑140 (MQ=255)                            aaTCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGAcc                                                                                                       <  1:92614/140‑1 (MQ=255)                                tctTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATaa                                                                                                   <  1:476392/140‑1 (MQ=255)                                tctTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATaa                                                                                                   <  2:647938/140‑1 (MQ=255)                                tctTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATaa                                                                                                   <  2:119548/140‑1 (MQ=255)                                tctTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATaa                                                                                                   <  2:916095/140‑1 (MQ=255)                                     ttttGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGAt                                                                                              <  2:438410/140‑1 (MQ=255)                                           cttacttaTTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCTCCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGcc                                                                                        <  1:269398/140‑1 (MQ=255)                                                    ttGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCa                                                                               >  1:1447807/1‑140 (MQ=255)                                                      gCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGCAACACTGAAAGAATGTAAGCGCTTACCAACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAgg                                                                             <  2:85637/140‑1 (MQ=255)                                                         tttGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGt                                                                          >  1:130298/1‑140 (MQ=255)                                                         tttGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGt                                                                          >  1:72172/1‑140 (MQ=255)                                                          ttGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGtt                                                                         <  2:431963/140‑1 (MQ=255)                                                             gCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCa                                                                      <  1:219690/140‑1 (MQ=255)                                                               tCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGt                                                                    <  1:124714/140‑1 (MQ=255)                                                                          cGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGttt                                                         >  1:674298/1‑140 (MQ=255)                                                                           gATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTc                                                        >  2:843014/1‑140 (MQ=255)                                                                            aTGAAAGCACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTcc                                                       <  2:1098913/140‑1 (MQ=255)                                                                            aTGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTcc                                                       <  2:938116/140‑1 (MQ=255)                                                                             tGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTccc                                                      >  1:239510/1‑140 (MQ=255)                                                                               aaaaCACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCcgc                                                    >  2:229712/1‑140 (MQ=255)                                                                                  acacGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTc                                                 <  1:1450280/140‑1 (MQ=255)                                                                                  acacGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTc                                                 <  1:381298/140‑1 (MQ=255)                                                                                       ccACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATtaa                                            >  1:934855/1‑140 (MQ=255)                                                                                                gAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCAcc                                   >  1:1489682/1‑140 (MQ=255)                                                                                                gAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCATCATTAATAATTCAcc                                   >  1:342204/1‑140 (MQ=255)                                                                                                    cAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCCTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCaaa                               <  2:1210859/140‑1 (MQ=255)                                                                                                       cGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGcc                            >  1:917489/1‑140 (MQ=255)                                                                                                          gCGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGc                         <  2:1085787/140‑1 (MQ=255)                                                                                                           cGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCg                        <  1:364678/140‑1 (MQ=255)                                                                                                           cGTTTTCCGTAACACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCg                        >  1:684757/1‑140 (MQ=255)                                                                                                              tttCCGTAACACTGAAAGAATGTAAGCGCTTCCCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAg                     <  2:890627/140‑1 (MQ=255)                                                                                                                     aaCACTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCg              <  1:40787/140‑1 (MQ=255)                                                                                                                       cacTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCggc            <  1:286402/140‑1 (MQ=255)                                                                                                                       cacTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCggc            <  1:1085273/140‑1 (MQ=255)                                                                                                                       cacTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCggc            <  1:90016/140‑1 (MQ=255)                                                                                                                       cacTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCggc            <  1:435601/140‑1 (MQ=255)                                                                                                                       cacTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCggc            <  1:326912/140‑1 (MQ=255)                                                                                                                       cacTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCggc            <  1:843014/140‑1 (MQ=255)                                                                                                                       cacTGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCggc            <  1:789868/140‑1 (MQ=255)                                                                                                                          tGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCt                   >  2:1325917/1‑130 (MQ=255)                                                                                                                          tGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCt                   <  1:1325917/130‑1 (MQ=255)                                                                                                                          tGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCggctgg         >  2:621197/1‑140 (MQ=255)                                                                                                                          tGAAAGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCggctgg         <  1:322753/140‑1 (MQ=255)                                                                                                                            aaaGAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCggctggct       <  2:72172/140‑1 (MQ=255)                                                                                                                               gAATGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCGGCTGGCtgtg    <  2:515249/140‑1 (MQ=255)                                                                                                                                 aTGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCGGCTGGCTGTGCa  <  2:131692/140‑1 (MQ=255)                                                                                                                                 aTGTAAGCGCTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCGGCTGGCTGTGCa  <  1:1084248/140‑1 (MQ=255)                                                                                                                                          |                                                                                                                                   TTTCGCAAAGTGTAACCAAAGGTTTGCAATCTCTTTTTTTGTCTTACTTATTTGCGTTTGGCTCACATTCCCACGATGAAAACACGCCACCCCTTGAACCAACGGGCGTTTTCCGTAACACTGAAAGAATGTAAGCGTTTACCCACTAAGGTATTTTCATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCGGCTGGCTGTGCA  >  NC_000913/2976441‑2976708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑