BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,316,522	T→C	E335E (GAA→GAG)	nusA ←	transcription termination/antitermination protein NusA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,316,522	0	T	C	100.0%	355.8 / NA	99	E335E (GAA→GAG)	nusA	transcription termination/antitermination protein NusA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (52/47); total (52/47)

Only 100 of 102 total aligned reads displayed.

CGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGTTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCTTCATCCACCACGATAGAAGCAACGT  >  NC_000913/3316387‑3316652

cGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTccc                                                                                                                                >  2:930861/1‑140 (MQ=255)

 gTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCa                                                                                                                               >  2:1276086/1‑140 (MQ=255)

  tCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCaa                                                                                                                              >  1:657057/1‑140 (MQ=255)

  tCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCaa                                                                                                                              >  1:1427678/1‑140 (MQ=255)

       aaGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCt                                                                                                                         <  2:1175650/140‑1 (MQ=255)

            ttcttcTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCt                                                                                                                    >  1:125282/1‑140 (MQ=255)

             tcttctACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTg                                                                                                                   >  2:1233336/1‑140 (MQ=255)

              cttctACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGc                                                                                                                  >  1:386521/1‑140 (MQ=255)

                    ccAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGcc                                                                                                            >  1:1318638/1‑140 (MQ=255)

                    ccAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGAGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGcc                                                                                                            >  1:1405151/1‑140 (MQ=255)

                     cAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCa                                                                                                           <  2:1074360/140‑1 (MQ=255)

                     cAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCa                                                                                                           <  1:653813/140‑1 (MQ=255)

                     cAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCa                                                                                                           <  2:838689/140‑1 (MQ=255)

                     cAGAACAGTCGCGAAGTCTGCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGGCGTCAACGGTCATCACGTTGAGATCCCAACCGCTCAGCTGCGAAGcta                                                                                                           <  2:815183/140‑3 (MQ=255)

                        aaCAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGAc                                                                                                        >  1:526974/1‑140 (MQ=255)

                        aaCAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGAc                                                                                                        >  2:860064/1‑140 (MQ=255)

                         aCAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACg                                                                                                       <  1:66714/140‑1 (MQ=255)

                         aCAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACg                                                                                                       <  1:900858/140‑1 (MQ=255)

                         aCAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACg                                                                                                       <  1:1246774/140‑1 (MQ=255)

                          cAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGc                                                                                                      <  2:1516065/140‑1 (MQ=255)

                          cAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGc                                                                                                      <  1:969435/140‑1 (MQ=255)

                            gTCGCGAAGTCTTCGCCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCAc                                                                                                    >  2:1216182/1‑140 (MQ=255)

                             tCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACg                                                                                                   <  1:995022/140‑1 (MQ=255)

                             tCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACg                                                                                                   >  1:817104/1‑140 (MQ=255)

                             tCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACg                                                                                                   >  2:1520555/1‑140 (MQ=255)

                             tCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAACCAGACGCACg                                                                                                   >  1:13230/1‑140 (MQ=255)

                              cgcgAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGt                                                                                                  >  2:1011432/1‑140 (MQ=255)

                              cgcgAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGt                                                                                                  >  2:520516/1‑140 (MQ=255)

                                  aaGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTg                                                                                              >  2:1270078/1‑140 (MQ=255)

                                  aaGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTg                                                                                              >  2:254521/1‑140 (MQ=255)

                                   aGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGa                                                                                             <  1:85009/140‑1 (MQ=255)

                                          gtcgATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTAc                                                                                      >  2:926522/1‑140 (MQ=255)

                                          gtcgATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTAc                                                                                      >  1:1228058/1‑140 (MQ=255)

                                               tGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTTCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCa                                                                                 >  1:1386076/1‑140 (MQ=255)

                                               tGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCa                                                                                 >  2:577018/1‑140 (MQ=255)

                                               tGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCa                                                                                 >  1:956462/1‑140 (MQ=255)

                                               tGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCa                                                                                 >  2:1342203/1‑140 (MQ=255)

                                               tGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCa                                                                                 >  1:1489990/1‑140 (MQ=255)

                                               tGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCa                                                                                 >  1:1306406/1‑140 (MQ=255)

                                               tGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCa                                                                                 >  1:27159/1‑140 (MQ=255)

                                               tGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGGTACGGCCa                                                                                 >  2:372021/1‑140 (MQ=255)

                                                gTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCaa                                                                                >  1:16087/1‑140 (MQ=255)

                                                  cGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATc                                                                              >  1:720114/1‑140 (MQ=255)

                                                    agaTATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGc                                                                            <  1:1378908/140‑1 (MQ=255)

                                                     gaTATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGcc                                                                           <  1:1276086/140‑1 (MQ=255)

                                                     gaTATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGcc                                                                           <  1:1270078/140‑1 (MQ=255)

                                                     gaTATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGcc                                                                           <  2:604704/140‑1 (MQ=255)

                                                         tttGGTGAAGGTGTCGGTCGCTGCGTGCGCTTCCGCCTGGTGCTTAGCCTGCAGGTGGGCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTgcg                                                                       <  2:588645/140‑1 (MQ=255)

                                                         tttGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTgcg                                                                       <  1:752306/140‑1 (MQ=255)

                                                           tGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGcc                                                                     <  2:386521/140‑1 (MQ=255)

                                                                  ggTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTAc                                                              >  2:1506330/1‑140 (MQ=255)

                                                                   gtgtCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTAcc                                                             >  2:898772/1‑140 (MQ=255)

                                                                   gtgtCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTAcc                                                             >  2:549757/1‑140 (MQ=255)

                                                                   gtgtCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTAcc                                                             >  2:342591/1‑140 (MQ=255)

                                                                   gtgtCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTAcc                                                             >  1:1207869/1‑140 (MQ=255)

                                                                     gtCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCgg                                                           >  1:607389/1‑140 (MQ=255)

                                                                     gtCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCgg                                                           >  1:467887/1‑140 (MQ=255)

                                                                      tCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGc                                                          >  1:299130/1‑140 (MQ=255)

                                                                       cGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCt                                                         >  1:322293/1‑140 (MQ=255)

                                                                        gATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCtt                                                        <  1:733683/140‑1 (MQ=255)

                                                                         aTCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTc                                                       <  1:979388/140‑1 (MQ=255)

                                                                           cGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCaa                                                     <  2:402633/140‑1 (MQ=255)

                                                                           cGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCaa                                                     <  1:1233336/140‑1 (MQ=255)

                                                                             cTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACg                                                   >  2:1499253/1‑140 (MQ=255)

                                                                             cTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACg                                                   <  2:657057/140‑1 (MQ=255)

                                                                              tgcgtgcgCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACgg                                                  >  2:940478/1‑140 (MQ=255)

                                                                               gcgtgcgCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGc                                                 <  1:889695/140‑1 (MQ=255)

                                                                               gcgtgcgCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGACCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGc                                                 <  1:1152240/140‑1 (MQ=255)

                                                                                 gtgcgCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGa                                               <  2:1489990/140‑1 (MQ=255)

                                                                                    cgcTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGatat                                            <  2:1273313/140‑1 (MQ=255)

                                                                                     gcTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATc                                           <  1:1441597/140‑1 (MQ=255)

                                                                                       ttCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCa                                         <  1:1216182/140‑1 (MQ=255)

                                                                                       ttCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCa                                         <  1:372021/140‑1 (MQ=255)

                                                                                       ttCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCa                                         <  2:464094/140‑1 (MQ=255)

                                                                                        tCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCAt                                        >  1:752730/1‑140 (MQ=255)

                                                                                         ccGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATg                                       <  1:1206645/140‑1 (MQ=255)

                                                                                         ccGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATg                                       <  1:142534/140‑1 (MQ=255)

                                                                                         ccGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAACCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATg                                       <  2:13230/140‑1 (MQ=255)

                                                                                            ccTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGgtg                                    >  1:382437/1‑140 (MQ=255)

                                                                                            ccTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGgtg                                    <  1:914396/140‑1 (MQ=255)

                                                                                               gATGCTTAGCCTGCAGGTCGTCACCGGTCATCCCGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCCCGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGgtgtgt                                 <  2:1242534/140‑1 (MQ=255)

                                                                                               gATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAAGCGCATCCGCCAGGCTACCGGCTTCAACGGCGATATCCATGgtgtgt                                 >  2:631546/1‑140 (MQ=255)

                                                                                                  gCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTa                              <  1:1425531/140‑1 (MQ=255)

                                                                                                     tAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCt                           <  2:411656/140‑1 (MQ=255)

                                                                                                     tAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCt                           <  2:1386076/140‑1 (MQ=255)

                                                                                                     tAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCt                           <  2:817104/140‑1 (MQ=255)

                                                                                                        ccTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCTTCa                        <  1:520516/140‑1 (MQ=255)

                                                                                                        ccTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCTTCa                        <  1:1301126/140‑1 (MQ=255)

                                                                                                        ccTGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCTTCa                        <  2:467887/140‑1 (MQ=255)

                                                                                                          tGCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCTTCATc                      <  2:299130/140‑1 (MQ=255)

                                                                                                           gCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCTTCATcc                     >  1:32830/1‑140 (MQ=255)

                                                                                                           gCAGGTCGTCAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCTTCATcc                     >  2:854076/1‑140 (MQ=255)

                                                                                                                tcgtcAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCTTCATCcaccac                >  1:571205/1‑140 (MQ=255)

                                                                                                                 cgtcAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCTTCATCCACCACg               >  1:470165/1‑140 (MQ=255)

                                                                                                                 cgtcAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCTTCATCCACCACg               >  2:1203133/1‑140 (MQ=255)

                                                                                                                 cgtcAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGACAATCGCCTGCGCCAGGTTACCGGCTTCAACGACGAAAACCATGGTGTGTTTATCTTCAACCACCACg               >  2:1057217/1‑140 (MQ=255)

                                                                                                                  gtcAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCTTCATCCACCACGa              <  1:1342203/140‑1 (MQ=255)

                                                                                                                    cAACGGTCATCACGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCTTCATCCACCACGATa            <  2:1207869/140‑1 (MQ=255)

                                                                                                                             tcaCGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCTTCATCCACCACGATAGAAGCAACg   >  2:1506737/1‑140 (MQ=255)

                                                                                                                              caCGTTGAGCTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCTTCATCCACCACGATAGAAGCAACGt  <  1:1506330/140‑1 (MQ=255)

CGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAAGGTGTCGATCGCTGCGTGCGCTTCCGCCTGATGCTTAGCCTGCAGGTCGTCAACGGTCATCACGTTGAGTTCCCAACCGCTCAGCTGCGAAGCCAGACGCACGTTCTGACCGTTACGGCCAATCGCCTGCGCCAGGTTACCGGCTTCAACGGCGATATCCATGGTGTGTTTATCTTCATCCACCACGATAGAAGCAACGT  >  NC_000913/3316387‑3316652

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`