Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,554,315	T→C	L411L (TTG→CTG)	malT →	DNA‑binding transcriptional activator MalT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,554,315	0	T	C	100.0%	260.7 / NA	69	L411L (TTG→CTG)	malT	DNA‑binding transcriptional activator MalT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (35/34);  total (35/34)

GGCGGCAGGCGATGCGCTGATGCTGCGCGATATTCTGCTTAATCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGTTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGAGAAGACACCATGCACGCAGAATTTAACGCTCTGCG  >  NC_000913/3554179‑3554448                                                                                                                                         |                                                                                                                                      ggcggcAGGCGATGCGCTGATGCTGCGCGATATTCTGCTTAATCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTgg                                                                                                                                    >  2:1125993/1‑140 (MQ=255)  gcggcAGGCGATGCGCTGATGCTGCGCGATATTCTGCTTAATCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGgt                                                                                                                                   >  1:1439167/1‑140 (MQ=255)   cggcAGGCGATGCGCTGATGCTGCGCGATATTCTGCTTAATCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGgtg                                                                                                                                  <  2:608496/140‑1 (MQ=255)              gcgcTGATGCTGCGCGATATTCTGCTTAATCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGc                                                                                                                       <  2:750868/140‑1 (MQ=255)                          cgcgATATTCTGCTTAATCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAATCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCa                                                                                                           >  1:1137484/1‑140 (MQ=255)                          cgcgATATTCTGCTTAATCACGCCT‑GAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCaa                                                                                                          >  2:1058622/1‑140 (MQ=255)                              atatTCTGCTTAATCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGc                                                                                                       >  1:638166/1‑140 (MQ=255)                              atatTCTGCTTAATCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGc                                                                                                       >  2:1324492/1‑140 (MQ=255)                                        tAATCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCt                                                                                             <  2:100811/140‑1 (MQ=255)                                         aaTCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTa                                                                                            >  2:88783/1‑140 (MQ=255)                                         aaTCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTa                                                                                            >  2:1315533/1‑140 (MQ=255)                                           tCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACg                                                                                          >  1:382553/1‑140 (MQ=255)                                           tCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACg                                                                                          >  2:751011/1‑140 (MQ=255)                                            cACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACgg                                                                                         <  1:878228/140‑1 (MQ=255)                                             aCGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAATCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGc                                                                                        <  2:1137484/140‑1 (MQ=255)                                              cGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCg                                                                                       <  1:1324492/140‑1 (MQ=255)                                               gCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGa                                                                                      <  1:492990/140‑1 (MQ=255)                                                ccTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGaa                                                                                     >  1:514208/1‑140 (MQ=255)                                                     aGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTaa                                                                                >  2:859923/1‑140 (MQ=255)                                                     aGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTaa                                                                                >  2:220373/1‑140 (MQ=255)                                                       tCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAaca                                                                              <  2:1282798/140‑1 (MQ=255)                                                       tCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAaca                                                                              <  1:1125993/140‑1 (MQ=255)                                                         tGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACAcc                                                                            >  2:1246717/1‑140 (MQ=255)                                                         tGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACAcc                                                                            >  1:531832/1‑140 (MQ=255)                                                           ttCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCt                                                                          >  2:1042748/1‑140 (MQ=255)                                                           ttCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCt                                                                          >  2:711330/1‑140 (MQ=255)                                                           ttCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCt                                                                          >  1:81054/1‑140 (MQ=255)                                                              aaCCATAGCGAACTGTCGCTGTTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCt                                                                       <  2:1517892/140‑1 (MQ=255)                                                               aCCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTa                                                                      >  1:38221/1‑140 (MQ=255)                                                                 cATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGc                                                                    <  2:638166/140‑1 (MQ=255)                                                                 cATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGc                                                                    <  2:301594/140‑1 (MQ=255)                                                                   tAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGccc                                                                  >  2:793412/1‑140 (MQ=255)                                                                     gCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCgg                                                                >  2:1069444/1‑139 (MQ=255)                                                                     gCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGt                                                                >  1:558670/1‑140 (MQ=255)                                                                     gCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGt                                                                >  1:527305/1‑140 (MQ=255)                                                                      cGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTg                                                               <  2:170539/140‑1 (MQ=255)                                                                        aaCTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCt                                                             <  2:1111446/140‑1 (MQ=255)                                                                         aCTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTg                                                            <  1:1383301/140‑1 (MQ=255)                                                                          cTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGa                                                           >  1:1316224/1‑140 (MQ=255)                                                                             tCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACa                                                        >  1:805871/1‑140 (MQ=255)                                                                             tCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACa                                                        >  2:767423/1‑140 (MQ=255)                                                                               gctgctGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACCGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATg                                                      <  1:1212094/140‑1 (MQ=255)                                                                                ctgctgGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGa                                                     >  2:1500318/1‑140 (MQ=255)                                                                                    tgGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATc                                                 <  1:711330/140‑1 (MQ=255)                                                                                       aaGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAg                                              <  2:1450829/140‑1 (MQ=255)                                                                                         gagTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGa                                            <  1:739632/140‑1 (MQ=255)                                                                                         gagTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGa                                            <  1:1137866/140‑1 (MQ=255)                                                                                          agTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGAc                                           >  1:1414405/1‑140 (MQ=255)                                                                                           gTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACa                                          <  2:911088/140‑1 (MQ=255)                                                                                           gTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACa                                          <  1:1058622/140‑1 (MQ=255)                                                                                           gTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACa                                          <  1:1315533/140‑1 (MQ=255)                                                                                           gTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACa                                          >  1:403783/1‑140 (MQ=255)                                                                                            tCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACAt                                         <  2:514208/140‑1 (MQ=255)                                                                                             cGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATc                                        >  1:1150920/1‑140 (MQ=255)                                                                                              gCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCa                                       >  1:719835/1‑140 (MQ=255)                                                                                              gCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCa                                       <  1:842219/140‑1 (MQ=255)                                                                                                ttAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCaga                                     <  1:916245/140‑1 (MQ=255)                                                                                                 tAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCagag                                    <  2:541900/140‑1 (MQ=255)                                                                                                 tAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCagag                                    <  2:881593/140‑1 (MQ=255)                                                                                                  aaGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAgaga                                   <  2:81054/140‑1 (MQ=255)                                                                                                    ggCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGagaag                                 <  2:531832/140‑1 (MQ=255)                                                                                                         tGCCGTGGGACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGAGAAGACAcc                            >  1:656492/1‑140 (MQ=255)                                                                                                               gggACAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGAGAAGACACCATGCAc                      <  1:438802/140‑1 (MQ=255)                                                                                                                  aCAGCTTGCTGGAGAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCACCATCGCTACGGCGAAGTTAACCCGCTGCTAGCCCATGCTGAACATGAAATCAAGGACATCGGCGAAGACACCATGCACGCa                   <  2:860004/140‑1 (MQ=255)                                                                                                                  aCAGCTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGAGAAGACACCATGCACGCa                   <  2:363424/140‑1 (MQ=255)                                                                                                                      cTTGCTGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGAGAAGACACCATGCACGCAGAAt               >  2:1209848/1‑140 (MQ=255)                                                                                                                           tGGAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGAGAAGACACCATGCACGCAGAATTTAAc          >  1:334874/1‑140 (MQ=255)                                                                                                                            ggAAAATCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGAGAAGACACCATGCACGCAGAATTTAACg         <  1:751011/140‑1 (MQ=255)                                                                                                                                 aTCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGAGAAGACACCATGCACGCAGAATTTAACGCTCTg    <  2:1316224/140‑1 (MQ=255)                                                                                                                                 aTCCGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACAGCGCTACGGCGAAGTTATCACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGAGAAGACACCATGCACGCAGAATTTAACGCTCTg    <  2:1218748/140‑1 (MQ=255)                                                                                                                                   ccGCAGCTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGAGAAGACACCATGCACGCAGAATTTAACGCTCTgcg  >  1:1075553/1‑140 (MQ=255)                                                                                                                                         |                                                                                                                                      GGCGGCAGGCGATGCGCTGATGCTGCGCGATATTCTGCTTAATCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGTTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGAGAAGACACCATGCACGCAGAATTTAACGCTCTGCG  >  NC_000913/3554179‑3554448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑