BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,241,331	C→T	G308G (GGG→GGA)	xylE ←	D‑xylose:H(+) symporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,241,331	0	C	T	100.0%	336.9 / NA	97	G308G (GGG→GGA)	xylE	D‑xylose:H(+) symporter
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (51/46); total (51/46)

Only 100 of 104 total aligned reads displayed.

CGATTGCCATTCCGAGTGCGCCGATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCCCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATCAGCAGACGACCACCGGTTTTGCGGC  >  NC_000913/4241192‑4241467

cGATTGCCATTCCGAGTGCGCCGATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGcc                                                                                                                                          >  2:1440648/1‑140 (MQ=255)

   ttGCCATTCCGAGTGCGCCGATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGctccc                                                                                                                                       >  1:179650/1‑140 (MQ=255)

    tGCCATTCCGAGTGCGCCGATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCa                                                                                                                                      <  2:1049442/140‑1 (MQ=255)

     gCCATTCCGAGTGCGCCGATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAg                                                                                                                                     >  1:1119918/1‑140 (MQ=255)

         ttCCGAGTGCGCCGATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGtt                                                                                                                                 >  2:255820/1‑140 (MQ=255)

          tCCGAGTGCGCCGATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGGGAGGTTGATAACTCCGACAATAATGGACTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGttt                                                                                                                                >  2:360065/1‑140 (MQ=255)

              aGTGCGCCGATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGaa                                                                                                                            <  1:267264/140‑1 (MQ=255)

              aGTGCGCCGATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGaa                                                                                                                            >  2:426251/1‑140 (MQ=255)

              aGTGCGCCGATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGaa                                                                                                                            >  2:1256165/1‑140 (MQ=255)

                 gcgcCGATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAacac                                                                                                                         >  1:792706/1‑140 (MQ=255)

                  cgcCGATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACt                                                                                                                        >  2:1132859/1‑140 (MQ=255)

                   gcCGATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACtt                                                                                                                       >  2:1148274/1‑140 (MQ=255)

                     cGATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTcc                                                                                                                     >  2:693400/1‑140 (MQ=255)

                      gATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCg                                                                                                                    <  1:612956/140‑1 (MQ=255)

                      gATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCg                                                                                                                    <  1:249900/140‑1 (MQ=255)

                      gATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCg                                                                                                                    <  2:459618/140‑1 (MQ=255)

                      gATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCg                                                                                                                    <  2:738399/140‑1 (MQ=255)

                      gATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCAACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCg                                                                                                                    <  1:1101038/140‑1 (MQ=255)

                        tAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGgc                                                                                                                  <  2:510593/140‑1 (MQ=255)

                           tttGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGcgcg                                                                                                               <  2:179650/140‑1 (MQ=255)

                           tttGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGcgcg                                                                                                               <  1:180494/140‑1 (MQ=255)

                           tttGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGcgcg                                                                                                               <  2:1353226/140‑1 (MQ=255)

                           tttGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGcgcg                                                                                                               <  2:213854/140‑1 (MQ=255)

                           tttGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGcgcg                                                                                                               <  2:218426/140‑1 (MQ=255)

                           tttGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGcgcg                                                                                                               <  1:999105/140‑1 (MQ=255)

                           tttGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGcgcg                                                                                                               <  1:316620/140‑1 (MQ=255)

                           tttGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGcgcg                                                                                                               <  1:862781/140‑1 (MQ=255)

                            ttGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCgt                                                                                                              >  1:401955/1‑140 (MQ=255)

                            ttGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCgt                                                                                                              <  2:901085/140‑1 (MQ=255)

                                aGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCgtagta                                                                                                          <  2:958529/140‑1 (MQ=255)

                                 gTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTAc                                                                                                         >  1:1436148/1‑140 (MQ=255)

                                  tGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACa                                                                                                        >  2:1329591/1‑140 (MQ=255)

                                   ggCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAg                                                                                                       <  1:1148274/140‑1 (MQ=255)

                                   ggCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAg                                                                                                       <  1:902123/140‑1 (MQ=255)

                                     cTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGca                                                                                                     <  2:882168/140‑1 (MQ=255)

                                      ttACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGcac                                                                                                    <  1:10859/140‑1 (MQ=255)

                                      ttACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGcac                                                                                                    <  1:427719/140‑1 (MQ=255)

                                      ttACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGcac                                                                                                    >  2:882098/1‑140 (MQ=255)

                                         cGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGcaccac                                                                                                 >  1:1092209/1‑140 (MQ=255)

                                         cGACCAAATGTTTCCACCGACATTATTGACAAAACGAAGTAGAAGGGGTTGATGACTCCGACAATAAGAGTCAGCAATAGCGCGATATCCATGCCAGCTCCCAGCGCTTTCAACACTTCCGGCGCGTAGAACAGctccac                                                                                                 >  2:331896/1‑140 (MQ=255)

                                              aaaTTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGa                                                                                            >  1:995773/1‑140 (MQ=255)

                                              aaaTTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGa                                                                                            >  2:370479/1‑140 (MQ=255)

                                               aaTTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGAt                                                                                           >  2:461351/1‑140 (MQ=255)

                                                      ccACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAGCACTTCCGGCGCGTTGTACAGCACCACATTGATGCCGACa                                                                                    <  2:1286032/140‑1 (MQ=255)

                                                        aCCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACaaa                                                                                  <  1:855246/140‑1 (MQ=255)

                                                         ccGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAAt                                                                                 >  1:213947/1‑140 (MQ=255)

                                                          cGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAAtt                                                                                >  2:1484619/1‑140 (MQ=255)

                                                          cGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAAtt                                                                                >  1:136388/1‑140 (MQ=255)

                                                             cATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCt                                                                             <  1:20713/140‑1 (MQ=255)

                                                             cATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCt                                                                             <  1:693400/140‑1 (MQ=255)

                                                               tAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTgg                                                                           <  1:355613/140‑1 (MQ=255)

                                                                aaTTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGa                                                                          <  2:61135/140‑1 (MQ=255)

                                                                  ttGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAg                                                                        <  2:792706/140‑1 (MQ=255)

                                                                      cAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATgg                                                                    >  1:1302689/1‑140 (MQ=255)

                                                                      cAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCACGATATCCGTGCTGGCTCCCAGCGATTTGAACACTTCCGGCCCGTAGTACAGCACCACATTGAAGCCGACAAATTGCTGGAAGATgg                                                                    >  2:106977/1‑140 (MQ=255)

                                                                       aGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGga                                                                   <  1:1118561/140‑1 (MQ=255)

                                                                          aCGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGagag                                                                >  1:727858/1‑140 (MQ=255)

                                                                              tGAAGGTGAGGTTGATAACTCCGACAGTAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCAtt                                                            >  2:1270838/1‑140 (MQ=255)

                                                                              tGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCAtt                                                            >  2:272365/1‑140 (MQ=255)

                                                                                 aGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACg                                                         <  1:1440648/140‑1 (MQ=255)

                                                                                 aGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACg                                                         <  2:1519441/140‑1 (MQ=255)

                                                                                   gTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGcc                                                       >  1:1199660/1‑140 (MQ=255)

                                                                                    tGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCg                                                      >  2:192247/1‑140 (MQ=255)

                                                                                      aGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGAt                                                    >  1:261953/1‑140 (MQ=255)

                                                                                       ggTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCTGACAAATTGCTGGAAGATGGAGAGCATTACGCCGAtt                                                   <  2:1436148/140‑1 (MQ=255)

                                                                                        gTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTa                                                  >  1:991324/1‑140 (MQ=255)

                                                                                        gTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTa                                                  >  2:646368/1‑140 (MQ=255)

                                                                                        gTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTa                                                  <  1:1449239/140‑1 (MQ=255)

                                                                                        gTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTa                                                  >  1:190748/1‑140 (MQ=255)

                                                                                          tGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACa                                                >  2:1409304/1‑140 (MQ=255)

                                                                                            aTAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAAt                                              >  1:1448824/1‑140 (MQ=255)

                                                                                            aTAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAAt                                              >  1:996109/1‑140 (MQ=255)

                                                                                            aTAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAAt                                              >  1:196895/1‑140 (MQ=255)

                                                                                             tAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATc                                             >  2:342571/1‑140 (MQ=255)

                                                                                             tAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATc                                             >  2:211359/1‑140 (MQ=255)

                                                                                              aaCTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATca                                            >  2:1325078/1‑140 (MQ=255)

                                                                                                  ccGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACGTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATcacgcc                                        <  2:583945/140‑1 (MQ=255)

                                                                                                   cGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATcacgccc                                       >  2:498528/1‑140 (MQ=255)

                                                                                                   cGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATcacgccc                                       >  1:596165/1‑140 (MQ=255)

                                                                                                    gACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATcacgccca                                      <  2:1092209/140‑1 (MQ=255)

                                                                                                       aataatGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATcacgcccacgc                                   <  1:498528/140‑1 (MQ=255)

                                                                                                         taatGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCa                                 <  1:575104/140‑1 (MQ=255)

                                                                                                           atGGTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCaaa                               >  1:180581/1‑140 (MQ=255)

                                                                                                              gTCTGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACAt                            <  2:900807/140‑1 (MQ=255)

                                                                                                                 tGCAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATcag                         >  1:1104922/1‑140 (MQ=255)

                                                                                                                   cAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATcagca                       >  2:279534/1‑140 (MQ=255)

                                                                                                                   cAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATcagca                       >  1:92282/1‑140 (MQ=255)

                                                                                                                   cAACAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATcagca                       >  2:710780/1‑140 (MQ=255)

                                                                                                                     aCAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATCAGCAga                     <  1:1404307/140‑1 (MQ=255)

                                                                                                                     aCAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATCAGCAga                     <  2:853411/140‑1 (MQ=255)

                                                                                                                      cAGCGCGATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATCAGCAgac                    <  1:461351/140‑1 (MQ=255)

                                                                                                                         cgcgATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATCAGCAgacgac                 >  2:1274326/1‑140 (MQ=255)

                                                                                                                         cgcgATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATCAGCAgacgac                 >  2:705022/1‑140 (MQ=255)

                                                                                                                         cgcgATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATCAGCAgacgac                 >  2:527340/1‑140 (MQ=255)

                                                                                                                         cgcgATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATCAGCAgacgac                 >  2:1321807/1‑140 (MQ=255)

                                                                                                                           cgATATCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATCAGCAGACGacca               >  2:524513/1‑140 (MQ=255)

                                                                                                                             atatCCGTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATCAGCAGACGaccacc             >  1:466004/1‑140 (MQ=255)

                                                                                                                                   gTGCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATCAGCAGACGACCACCGGtttt       >  2:751208/1‑140 (MQ=255)

                                                                                                                                     gCTGGCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATCAGCAGACGACCACCGGTTTTGc     <  1:996063/140‑1 (MQ=255)

                                                                                                                                        ggCTCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATCAGCAGACGACCACCGGTTTTGCGGc  >  2:129766/1‑140 (MQ=255)

CGATTGCCATTCCGAGTGCGCCGATAATTTGCAGTGGCTTACGACCAAATTTATCCACCGTCATAATTGCCAGAACGGTGAAGGTGAGGTTGATAACTCCGACAATAATGGTCTGCAACAGCGCGATATCCGTGCTGGCCCCCAGCGTTTTGAACACTTCCGGCGCGTAGTACAGCACCACATTGATGCCGACAAATTGCTGGAAGATGGAGAGCATTACGCCGATTACAATCACGCCCACGCCAAACATCAGCAGACGACCACCGGTTTTGCGGC  >  NC_000913/4241192‑4241467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`