BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,624,467	A→G	L30L (CTA→CTG)	yhhI →	putative transposase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,624,467	0	A	G	100.0%	307.9 / NA	100	L30L (CTA→CTG)	yhhI	putative transposase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (59/41); total (59/41)

Only 100 of 101 total aligned reads displayed.

ATACATGATCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCA  >  NC_000913/3624337‑3624603

ataCATGATCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACt                                                                                                                                 >  2:302490/1‑140 (MQ=37)

    aTGATCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGa                                                                                                                                   <  1:583987/134‑1 (MQ=37)

    aTGATCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGa                                                                                                                                   >  2:583987/1‑134 (MQ=255)

       aTCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTtgtg                                                                                                                          >  1:489599/1‑140 (MQ=255)

       aTCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTtgtg                                                                                                                          >  2:549599/1‑140 (MQ=255)

       aTCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTtgtg                                                                                                                          >  1:536599/1‑140 (MQ=255)

       aTCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTtgtg                                                                                                                          <  2:536599/140‑1 (MQ=37)

       aTCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTtgtg                                                                                                                          >  2:412620/1‑140 (MQ=255)

       aTCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTtgtg                                                                                                                          >  1:893608/1‑140 (MQ=255)

       aTCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTtgtg                                                                                                                          >  1:213706/1‑140 (MQ=38)

       aTCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTtgtg                                                                                                                          >  2:25694/1‑140 (MQ=255)

        tCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTAt                                                                                                                               <  2:100753/134‑1 (MQ=37)

        tCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTAt                                                                                                                               >  1:100753/1‑134 (MQ=255)

        tCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGc                                                                                                                         >  2:113219/1‑140 (MQ=255)

           aaTACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGt                                                                                                                      >  1:125859/1‑140 (MQ=255)

           aaTACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGt                                                                                                                      >  2:628/1‑140 (MQ=255)

                 ccTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTc                                                                                                                <  2:213706/140‑1 (MQ=25)

                  cTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCt                                                                                                               >  1:95300/1‑140 (MQ=25)

                  cTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCt                                                                                                               >  1:85643/1‑140 (MQ=25)

                  cTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCt                                                                                                               >  1:584001/1‑140 (MQ=25)

                  cTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCt                                                                                                               >  1:136427/1‑140 (MQ=25)

                  cTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCt                                                                                                               >  1:44201/1‑140 (MQ=25)

                   ttACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTg                                                                                                              <  1:215223/140‑1 (MQ=21)

                      ccTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTg                                                                                                           >  1:1033763/1‑140 (MQ=18)

                       cTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTTGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGc                                                                                                          <  1:25694/140‑1 (MQ=16)

                        tAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCa                                                                                                         <  1:302490/140‑1 (MQ=17)

                        tAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCa                                                                                                         <  1:896698/140‑1 (MQ=17)

                        tAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCa                                                                                                         <  2:489599/140‑1 (MQ=17)

                         aaTTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAg                                                                                                        <  2:85643/140‑1 (MQ=17)

                          aTTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGa                                                                                                       >  2:387584/1‑140 (MQ=17)

                          aTTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGa                                                                                                       <  2:136427/140‑1 (MQ=17)

                              aGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGt                                                                                                   <  1:209597/140‑1 (MQ=18)

                                gagaACAAAATGGAACTTAAAGAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTg                                                                                                 >  2:751916/1‑140 (MQ=21)

                                 agaACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTgg                                                                                                <  2:847776/140‑1 (MQ=25)

                                 agaACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTgg                                                                                                >  1:600450/1‑140 (MQ=21)

                                  gaACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTggg                                                                                               <  2:600450/140‑1 (MQ=25)

                                  gaACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTggg                                                                                               <  1:882175/140‑1 (MQ=25)

                                   aaCAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGt                                                                                                   >  1:578826/1‑135 (MQ=18)

                                   aaCAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGt                                                                                                   <  2:578826/135‑1 (MQ=18)

                                   aaCAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGa                                                                                              >  2:772266/1‑140 (MQ=21)

                                    aCAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGaa                                                                                             >  1:768991/1‑140 (MQ=21)

                                    aCAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGaa                                                                                             >  1:29330/1‑140 (MQ=21)

                                     cAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCa                                                                                                         <  2:429337/127‑1 (MQ=17)

                                     cAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCa                                                                                                         >  1:429337/1‑127 (MQ=17)

                                             aaCTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATagag                                                                                    >  2:1037145/1‑140 (MQ=25)

                                                  aaaaaaTTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGAttt                                                                               <  2:44201/140‑1 (MQ=25)

                                                                           ttatCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTg                                                      <  2:1033763/140‑1 (MQ=255)

                                                                           ttatCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTg                                                      <  2:29330/140‑1 (MQ=255)

                                                                           ttatCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTg                                                      >  1:462052/1‑140 (MQ=38)

                                                                           ttatCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTg                                                      <  2:1007409/140‑1 (MQ=38)

                                                                             atCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGaa                                                    <  1:772266/140‑1 (MQ=255)

                                                                             atCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGaa                                                    >  2:600131/1‑140 (MQ=255)

                                                                              tCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAg                                                   >  2:778722/1‑140 (MQ=255)

                                                                              tCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAg                                                   <  1:852630/140‑1 (MQ=38)

                                                                              tCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAg                                                   <  1:600131/140‑1 (MQ=255)

                                                                               ccccGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGc                                                  >  1:809031/1‑140 (MQ=255)

                                                                                cccGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCa                                                 >  1:353498/1‑140 (MQ=255)

                                                                                cccGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCa                                                 >  2:715403/1‑140 (MQ=38)

                                                                                cccGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCa                                                 >  1:366029/1‑140 (MQ=255)

                                                                                   gATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAata                                              >  1:720676/1‑140 (MQ=255)

                                                                                     ttACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATg                                            >  2:596746/1‑140 (MQ=255)

                                                                                        cAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTg                                         <  1:715403/140‑1 (MQ=255)

                                                                                         aGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGa                                        >  1:597388/1‑140 (MQ=255)

                                                                                          gACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGAt                                       <  2:720676/140‑1 (MQ=38)

                                                                                               aCCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGa                                  >  2:661115/1‑140 (MQ=25)

                                                                                               aCCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGa                                  >  1:535926/1‑140 (MQ=25)

                                                                                               aCCTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGa                                  >  1:86080/1‑140 (MQ=25)

                                                                                                ccTGGAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGaa                                 <  1:709384/140‑1 (MQ=25)

                                                                                                    gAAAGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATg                             >  1:781228/1‑140 (MQ=21)

                                                                                                     aaaGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATgg                            >  1:759013/1‑140 (MQ=21)

                                                                                                     aaaGTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATgg                            >  1:346986/1‑140 (MQ=21)

                                                                                                        gTGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTAt                         <  1:661115/140‑1 (MQ=25)

                                                                                                         tGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGaa                                 >  2:40787/1‑131 (MQ=21)

                                                                                                         tGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGaa                                 <  1:40787/131‑1 (MQ=25)

                                                                                                         tGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTAtt                        >  2:85384/1‑140 (MQ=21)

                                                                                                         tGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTAtt                        >  1:256466/1‑140 (MQ=21)

                                                                                                         tGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTAtt                        >  1:74026/1‑140 (MQ=21)

                                                                                                         tGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTAtt                        >  2:546096/1‑140 (MQ=21)

                                                                                                         tGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTAtt                        >  1:889205/1‑140 (MQ=21)

                                                                                                         tGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTAtt                        >  2:575188/1‑140 (MQ=21)

                                                                                                         tGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTAtt                        >  1:446872/1‑140 (MQ=21)

                                                                                                         tGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTAtt                        >  1:31962/1‑140 (MQ=21)

                                                                                                         tGGAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTAtt                        >  2:59162/1‑140 (MQ=21)

                                                                                                          ggAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTc                       <  2:346986/140‑1 (MQ=21)

                                                                                                          ggAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTc                       <  2:597388/140‑1 (MQ=25)

                                                                                                          ggAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTc                       >  2:745574/1‑140 (MQ=21)

                                                                                                          ggAACATAAAATATCGGATATTCTGATGATGACTATTTGTGCCGTTATTTCTGGTGCAGATGGTTGGGAAGATATAGAGGATTTTGGGGAAACTCATCTGGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTc                       <  2:446872/140‑1 (MQ=11)

                                                                                                           gAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTcc                      <  2:792335/140‑1 (MQ=25)

                                                                                                           gAACATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTcc                      >  1:10903/1‑140 (MQ=21)

                                                                                                              cATAAATTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGt                   <  1:113219/140‑1 (MQ=25)

                                                                                                                   aTTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACg              <  1:911520/140‑1 (MQ=25)

                                                                                                                   aTTATCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACg              <  2:584001/140‑1 (MQ=25)

                                                                                                                       tCGGATATTCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATAc          <  2:125859/140‑1 (MQ=21)

                                                                                                                              ttCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGcc   >  2:499921/1‑140 (MQ=17)

                                                                                                                              ttCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGcc   >  1:830981/1‑140 (MQ=17)

                                                                                                                               tCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATAc          <  2:3236/132‑1 (MQ=17)

                                                                                                                               tCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCa  <  2:440616/140‑1 (MQ=17)

                                                                                                                               tCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCa  <  2:31962/140‑1 (MQ=17)

                                                                                                                               tCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCa  <  1:342896/140‑1 (MQ=17)

                                                                                                                               tCTGCTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCa  <  2:893608/140‑1 (MQ=17)

ATACATGATCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCA  >  NC_000913/3624337‑3624603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`