Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 722,937 T→C N493S (AAC→AGC)  kdpD ← sensory histidine kinase KdpD

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913722,9370TC100.0% 241.3 / NA 64N493S (AAC→AGC) kdpDsensory histidine kinase KdpD
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (35/29);  total (35/29)

ATTGTTCGCTGGTGGCAGCGATATCCTGCGGACTGCGGCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGTTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTCACTACATTAATGACGGTGGCAAC  >  NC_000913/722803‑723067
                                                                                                                                      |                                                                                                                                  
aTTGTTCGCTGGTGGCAGCGATATCCTGCGGACTGCGGCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCg                                                                                                                               <  2:900048/140‑1 (MQ=255)
     tCGCTGGTGGCAGCGATATCCTGCGGACTGCGGCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCAc                                                                                                                          <  1:338557/140‑1 (MQ=255)
            tggCAGCGATATCCTGCGGACTGCGGCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCg                                                                                                                   <  2:383874/140‑1 (MQ=255)
                 gCGATATCCTGCGGACTGCGGCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGt                                                                                                              >  2:961586/1‑140 (MQ=255)
                     tatCCTGCGGACTGCGGCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAAc                                                                                                          >  1:801395/1‑140 (MQ=255)
                      atCCTGCGGACTGCGGCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCAc                                                                                                                          <  1:180330/123‑1 (MQ=255)
                      atCCTGCGGACTGCGGCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCAc                                                                                                                          >  2:180330/1‑123 (MQ=255)
                         cTGCGGACTGCGGCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCa                                                                                                      <  1:779804/140‑1 (MQ=255)
                            cGGACTGCAGCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCAACGGTTAACATCACcg                                                                                                   >  1:915663/1‑140 (MQ=255)
                                  gCGGCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAgg                                                                                             <  2:801395/140‑1 (MQ=255)
                                   cGGCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGt                                                                                            >  2:265052/1‑140 (MQ=255)
                                   cGGCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGt                                                                                            >  1:227733/1‑140 (MQ=255)
                                   cGGCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGt                                                                                            >  1:1026298/1‑140 (MQ=255)
                                     gCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTca                                                                                          <  1:915924/140‑1 (MQ=255)
                                       ccACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTcagc                                                                                        <  2:327211/140‑1 (MQ=255)
                                       ccACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTcagc                                                                                        <  2:106659/140‑1 (MQ=255)
                                        cACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTcagca                                                                                       >  1:226490/1‑140 (MQ=255)
                                          ccGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGa                                                                                     <  1:490764/140‑1 (MQ=255)
                                            gCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGata                                                                                   <  1:379952/140‑1 (MQ=255)
                                               agagCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTg                                                                                <  1:748933/140‑1 (MQ=255)
                                               agagCGTTCGACATTAAATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGTTCCCGACCACCAGCCCGACGGTTAACCTCACCGCGAAGGTCAGCAGATATTg                                                                                <  2:254539/140‑1 (MQ=255)
                                                  gCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGcac                                                                             <  1:42384/140‑1 (MQ=255)
                                                     ttCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATc                                                                          >  1:525417/1‑140 (MQ=255)
                                                                 tataAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAg                                                              <  2:68939/140‑1 (MQ=255)
                                                                    aaGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGt                                                           <  2:226490/140‑1 (MQ=255)
                                                                      gTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGc                                                         >  2:59858/1‑140 (MQ=255)
                                                                         ccGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCcgc                                                      >  1:992158/1‑140 (MQ=255)
                                                                         ccGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCcgc                                                      >  1:249538/1‑140 (MQ=255)
                                                                         ccGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCcgc                                                      >  2:351771/1‑140 (MQ=255)
                                                                         ccGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCcgc                                                      >  2:644566/1‑140 (MQ=255)
                                                                         ccGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCcgc                                                      >  2:547287/1‑140 (MQ=255)
                                                                         ccGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCcgc                                                      >  1:616279/1‑140 (MQ=255)
                                                                         ccGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCAGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCcgc                                                      >  1:926291/1‑140 (MQ=255)
                                                                            tgtgCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTg                                                   >  2:361136/1‑140 (MQ=255)
                                                                            tgtgCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTg                                                   >  2:113190/1‑140 (MQ=255)
                                                                            tgtgCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTg                                                   >  1:573847/1‑140 (MQ=255)
                                                                              tgCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTggg                                                 >  2:819910/1‑140 (MQ=255)
                                                                               gCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTgggg                                                <  1:265052/140‑1 (MQ=255)
                                                                               gCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTgggg                                                <  2:573847/140‑1 (MQ=255)
                                                                                 gTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTg                                                          <  1:1057813/128‑1 (MQ=255)
                                                                                 gTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTg                                                          >  2:1057813/1‑128 (MQ=255)
                                                                                         cgGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATaaaaaa                                      <  1:547287/140‑1 (MQ=255)
                                                                                             aaCGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAgaga                                  >  2:565251/1‑140 (MQ=255)
                                                                                                    tACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAAc                           >  2:345853/1‑140 (MQ=255)
                                                                                                    tACCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAAc                           >  1:856278/1‑140 (MQ=255)
                                                                                                     aCCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGAt                                 >  2:823169/1‑133 (MQ=255)
                                                                                                     aCCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGAt                                 <  1:823169/133‑1 (MQ=255)
                                                                                                     aCCCGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACt                          >  1:852621/1‑140 (MQ=255)
                                                                                                      cccGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAGCATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTc                         >  1:214350/1‑140 (MQ=255)
                                                                                                      cccGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTc                         >  2:426102/1‑140 (MQ=255)
                                                                                                       ccGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTCa                        <  2:992158/140‑1 (MQ=255)
                                                                                                       ccGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTCa                        <  2:856278/140‑1 (MQ=255)
                                                                                                       ccGCGCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTCa                        <  2:525417/140‑1 (MQ=255)
                                                                                                        cgcgCCTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTCAc                       <  1:345853/140‑1 (MQ=255)
                                                                                                            ccTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGaaa                            >  2:506246/1‑131 (MQ=255)
                                                                                                            ccTGATAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGaaa                            <  1:506246/131‑1 (MQ=255)
                                                                                                                aTAACGCACGCCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTCACTACATTaa               >  2:1043876/1‑140 (MQ=255)
                                                                                                                   acgcacgcCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAGCATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTCACTACATTAATGa            <  2:214350/140‑1 (MQ=255)
                                                                                                                    cgcacgcCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTCACTACAttctgtct           >  2:772880/1‑134 (MQ=255)
                                                                                                                       acgcCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTCACTACATTAATGa            >  2:470882/1‑136 (MQ=255)
                                                                                                                       acgcCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTCACTACATTAATGa            <  1:470882/136‑1 (MQ=255)
                                                                                                                        cgcCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTCACTACATTAATGACGGTg       <  2:227733/140‑1 (MQ=255)
                                                                                                                         gcCAGCAGTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTCACTACATTAATGACGGTgg      >  2:944178/1‑140 (MQ=255)
                                                                                                                            agcagTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTCACTACATTAATGACGGTGGCaa   >  1:313846/1‑140 (MQ=255)
                                                                                                                             gcagTAAGGCTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTCACTACATTAATGACGGTGGCAAc  <  1:961586/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                  
ATTGTTCGCTGGTGGCAGCGATATCCTGCGGACTGCGGCCCACCGCCAGAGCTTTCGACATTTCATATAAGTGCCGTGTGCGTTGCTCGCGGTAACGGGCTACCCGCGCCTGATAACGCACGCCAGCAGTAAGGTTCCCGATCACCAGCCCGACGGTTAACATCACCGCGAAGGTCAGCAGATATTGCACATCAGAGACGGCGAGCGTGCCGCGTGGGGCGATAAAAAAGAGATCGAAACTCACTACATTAATGACGGTGGCAAC  >  NC_000913/722803‑723067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: