| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,775,461 | G→A | intergenic (+17/‑126) | aroD → / → ydiF | 3‑dehydroquinate dehydratase/putative acetate‑CoA transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,775,461 | 0 | G | A | 100.0% | 58.5 / NA | 19 | intergenic (+17/‑126) | aroD/ydiF | 3‑dehydroquinate dehydratase/putative acetate‑CoA transferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (11/8); total (11/8) | |||||||||||
TGGCTGGTGAAGTATTTGGCTCGGCGGCAACTTTTGGTGCGGTAAAAAAAGCGTCTGCGCCAGGGCAAATCTCGGTAAATGATTTGCGCACGGTATTAACTATTTTACACCAGGCATAAGCAATAATATTTCGGCGGGAACACCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCGTAGGGAAAATCACATCTGAATCAGGAATTAACAATGAAACCTG > NC_000913/1775326‑1775596 | tggctggTGAAGTATTTGGCTCGGCGGCAACTTTTGGTGCGGTAAAAAAAGCGTCTGCGCCAGGGCAAATCTCGGTAAATGATTTGCGCACGGTATTAACTATTTTACACCAGGCATAAGCAATAATATTTCGGCAGGaa < 1:415993/140‑1 (MQ=255) gctggTGAAGTATTTGGCTCGGCGGCAACTTTTGGTGCGGTAAAAAAAGCGTCTGCGCCAGGGCAAATCTCGGTAAATGATTTGCGCACGGTATTAACTATTTTACACCAGGCATAAGCAATAATATTTCGGCAGGAaca < 2:148163/140‑1 (MQ=255) gTATTTGGCCCGGCGGCAACTTTTGGTGCGGTAAAAAAAGCGTCTGCCCCGGGGCAAATCTCGGAAAATGATTTGCGCCAGGTATAAACTATTTTACACCAGGCATAAGCAATAATATTTCGGCAGGAACACCCTCCccg < 2:67918/140‑1 (MQ=255) gCTCGGCGGCAACTTTTGGTGCGGTAAAAAAAGCGTCTGCGCCAGGGCAAATCTCGGTAAATGATTTGCGCACGGTATTAACTATTTTACCCCAGGCATAAGCAATAATATTTCGGCAGGAACCCCCTCCCCGCCGAACt < 2:83444/140‑1 (MQ=255) gcggcAACTTTTGGTGCGGTAAAAAAAGCGTCTGCGCCAGGGCAAATCTCGGTAAATGATTTGCGCACGGTATTAACTATTTTACACCAGGCATAAGCAATAATATTTCGGCAGGAACCCCCTCCCCGCCGAACTaaaaa < 2:825569/140‑1 (MQ=255) aaCTTTTGGTGCGGTAAAAAAAGCGTCTGCGCCAGGGCAAATCTCGGTAAATGATTTGCGCACGGTATTAACTATTTTACACCAGGCATAAGCAATAATATTTCGGCAGGAACACCCTCCCCGCCGAACTAAAAAatata < 1:74427/140‑1 (MQ=255) tttttGGTGCGGTAAAAAAAGCGTCTGCGCCAGGGCAAATCTCGGAAAATGATTTGCGCACGGTATTAACTATTTTACACCAGGCATAAGAAATAATATTTCGGCAGGAACCCCCTCCCCGCCGAACTAAAAAATATAtt < 1:1024627/139‑1 (MQ=255) aTCTCGGTAAATGATTTGCGCACGGTATTAACTATTTTACACCAGGCATAAGCAATAATATTTCGGCAGGAACACCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCtgtg > 1:883558/1‑140 (MQ=255) cACGGTATTAACTATTTTACACCAGGCATAAGCAATAATATTTCGGCAGGAACCCCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCg < 1:868267/140‑1 (MQ=255) tttACACCAGGCATAAGCAATAATATTTCGGCAGGAACCCCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCGTAGGGAAAATCACAt < 1:30799/140‑1 (MQ=255) tttACACCAGGCATAAGCAATAATATTTCGGCAGGAACACCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCGTAGGGAAAATCACAt > 1:136458/1‑140 (MQ=255) tttACACCAGGCATAAGCAATAATATTTCGGCAGGAACACCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCGTAGGGAAAATCACAt > 2:405571/1‑140 (MQ=255) tttACACCAGGCATAAGCAATAATATTTCGGCAGGAACACCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCGTAGGGAAAATCACAt > 2:30799/1‑140 (MQ=255) acCAGGCATAAGCAATAATATTTCGGCAGGAACACCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCGTAGGGAAAATCACATCTGaa > 2:1050066/1‑140 (MQ=255) ggCATAAGCAATAATATTTCGGCAGGAACACCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCGTAGGGAAAATCACATCTGAATCAg > 1:975725/1‑140 (MQ=255) ggCATAAGCAATAATATTTCGGCAGGAACACCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCGTAGGGAAAATCACATCTGAATCAg > 1:115542/1‑140 (MQ=255) aaGCAATAATATTTCGGCAGGAACACCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCGTAGGGAAAATCACATCTGAATCAGGAAtt > 2:800362/1‑140 (MQ=255) taataTTTCGGCAGGAACACCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCGTAGGGAAAATCACATCTGAATCAGGAATTAACAAt > 2:166710/1‑140 (MQ=255) taataTTTCGGCAGGAACACCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCGTAGGGAAAATCACATCTGAATCAGGAATTAACAAt > 1:999498/1‑140 (MQ=255) taataTTTCGGCAGGAACACCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCGTAGGGAAAATCACATCTGAATCAGGAATTAACAAt > 1:55506/1‑140 (MQ=255) cggcagGAACACCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCGTAGGGAAAATCACATCTGAATCAGGAATTAACAATGAAACCTg > 1:396557/1‑140 (MQ=255) cggcagGAACACCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCGTAGGGAAAATCACATCTGAATCAGGAATTAACAATGAAACCTg > 1:305662/1‑140 (MQ=255) | TGGCTGGTGAAGTATTTGGCTCGGCGGCAACTTTTGGTGCGGTAAAAAAAGCGTCTGCGCCAGGGCAAATCTCGGTAAATGATTTGCGCACGGTATTAACTATTTTACACCAGGCATAAGCAATAATATTTCGGCGGGAACACCCTCCCCGCCGAACTAAAAAATATATTCAATCGTATTTAATAAAAATATTTCGTGAGTCTCTGTGCGCTAATTCTCCATTTGGCGTAGGGAAAATCACATCTGAATCAGGAATTAACAATGAAACCTG > NC_000913/1775326‑1775596 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |