Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,367,550	T→C	G160G (GGT→GGC)	arnC →	undecaprenyl‑phosphate 4‑deoxy‑4‑formamido‑L‑arabinose transferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,367,550	0	T	C	100.0%	89.2 / NA	25	G160G (GGT→GGC)	arnC	undecaprenyl‑phosphate 4‑deoxy‑4‑formamido‑L‑arabinose transferase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (15/10);  total (15/10)

AAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAG  >  NC_000913/2367415‑2367682                                                                                                                                        |                                                                                                                                     aaaaGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTa                                                                                                                                  <  2:21551/140‑1 (MQ=255)       cGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTAtgctgc                                                                                                                            >  2:850493/1‑140 (MQ=255)               gTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTAt                                                                                                                    <  1:435233/140‑1 (MQ=255)                   cgacgTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGcc                                                                                                                <  1:850493/140‑1 (MQ=255)                         ggTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCata                                                                                                          <  1:42754/140‑1 (MQ=255)                         ggTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCata                                                                                                          >  1:521613/1‑140 (MQ=255)                         ggTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCata                                                                                                          >  2:398489/1‑140 (MQ=255)                                  tGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTcgatg                                                                                                 >  2:79575/1‑140 (MQ=255)                                  tGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTcgatg                                                                                                 <  2:521613/140‑1 (MQ=255)                                  tGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTcgatg                                                                                                 >  2:435361/1‑140 (MQ=255)                                  tGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTcgatg                                                                                                 >  1:330832/1‑140 (MQ=255)                                    tACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTcgatgcg                                                                                               >  1:195127/1‑140 (MQ=255)                                            aaCCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCTCCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCa                                                                                       <  1:433613/140‑1 (MQ=255)                                            aaCCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCa                                                                                       <  1:435361/140‑1 (MQ=255)                                                   aGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCAt                                                                                <  2:5222/140‑1 (MQ=255)                                                           tGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACgcag                                                                        <  2:195127/140‑1 (MQ=255)                                                                           cTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGAtt                                                        <  2:330832/140‑1 (MQ=255)                                                                                               cTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTcgcccg                                    >  2:343453/1‑140 (MQ=255)                                                                                               cTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTcgcccg                                    >  2:512360/1‑140 (MQ=255)                                                                                                ttATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGATCGCAGCACCTTTATCCCGATTCTGGCGAATATCTTcgcccgc                                   >  2:728547/1‑140 (MQ=255)                                                                                                        cgcACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCAt                           >  2:1051336/1‑140 (MQ=255)                                                                                                        cgcACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCAt                           >  2:420392/1‑140 (MQ=255)                                                                                                         gcACCACTGGCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCAtt                          >  1:794107/1‑140 (MQ=255)                                                                                                           cccacGGGAAAGGCGAGGGGTGATTCCGGCTGTATGCTGCGCGCCTATCGCCGTAATTTTGTCGATGCGATGTTGCACTGCCATGACCGCACCCCTTTTACCCCGTTTCGGGCAAATTTCTTCGCCCGCCGTGCCATTGa                        <  2:836255/139‑1 (MQ=255)                                                                                                                  gCAAAGCGATGGGTGATTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCa                 >  1:472183/1‑140 (MQ=255)                                                                                                                                 aTTACGGCTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAg  >  1:511175/1‑140 (MQ=255)                                                                                                                                        |                                                                                                                                     AAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAG  >  NC_000913/2367415‑2367682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑