BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	2,857,096	Δ2,538 bp	coding (4‑2541/2562 nt)	mutS →	DNA mismatch repair protein MutS

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2857096	2859633	2538	83 [0]	[0] 83	mutS	DNA mismatch repair protein MutS

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2857095	0 (0.000)	83 (1.490)	50/274	0.1	100%	coding (3/2562 nt)	mutS	DNA mismatch repair protein MutS
*	?	NC_000913	2859634 =	0 (0.000)	83 (1.490)	50/274	0.1	100%	coding (2542/2562 nt)	mutS	DNA mismatch repair protein MutS

ACCAGCATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATGGGTGATTTTTATGAACTGTTTTATGACGACGCAAAACGCGCG  >  NC_000913/2856959‑2857233

aCCAGCATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgc                                                                                                                                         <  1:724918‑M1/140‑4 (MQ=255)

     cATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaa                                                                                                                                    >  2:131273‑M1/1‑132 (MQ=255)

     cATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaa                                                                                                                                    >  1:725481‑M1/1‑132 (MQ=255)

     cATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaa                                                                                                                                    <  2:789451‑M1/140‑9 (MQ=255)

     cATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaa                                                                                                                                    <  2:470867‑M1/140‑9 (MQ=255)

                cGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgt                                                                                                                         <  2:247105‑M1/140‑20 (MQ=255)

                     ttCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataa                                                                                                                    <  1:310316‑M1/140‑25 (MQ=255)

                               ccccTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgt                                                                                                                         <  2:475905‑M1/125‑20 (MQ=255)

                               ccccTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgt                                                                                                                         >  1:475905‑M1/1‑106 (MQ=255)

                                   tGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagt                                                                                                      >  1:544275‑M1/1‑102 (MQ=255)

                                    gAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtc                                                                                                     >  1:779674‑M1/1‑101 (MQ=255)

                                          aTTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACTAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgc                                                                                               >  1:493915‑M1/1‑95 (MQ=255)

                                          aTTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgc                                                                                               >  1:781795‑M1/1‑95 (MQ=255)

                                           ttAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgct                                                                                              <  1:131273‑M1/140‑47 (MQ=255)

                                            tAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaatagcaattcccgatagtcttttgcta                                                                                             <  2:152127‑M1/140‑48 (MQ=255)

                                              aCTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatc                                                                                           <  1:648277‑M1/140‑50 (MQ=255)

                                               cTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcg                                                                                          >  2:828652‑M1/1‑90 (MQ=255)

                                                tCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgg                                                                                         <  2:814278‑M1/140‑52 (MQ=255)

                                                tCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgg                                                                                         >  2:474818‑M1/1‑89 (MQ=255)

                                                         aTGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaa                                                                                >  2:155620‑M1/1‑80 (MQ=255)

                                                         aTGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctat                                                                                            <  1:600348‑M1/128‑49 (MQ=255)

                                                         aTGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctat                                                                                            >  2:600348‑M1/1‑80 (MQ=255)

                                                          tgtgCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaac                                                                               >  1:859267‑M1/1‑79 (MQ=255)

                                                          tgtgCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcctttgctatcgggaatattaac                                                                               >  2:787766‑M1/1‑79 (MQ=255)

                                                              cgcCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgaca                                                                           >  1:677568‑M1/1‑75 (MQ=255)

                                                              cgcCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgaca                                                                           >  1:17843‑M1/1‑75 (MQ=255)

                                                               gcCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaa                                                                          <  2:725481‑M1/140‑67 (MQ=255)

                                                                 cTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaact                                                                        >  2:939526‑M1/1‑72 (MQ=255)

                                                                 cTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaact                                                                        >  1:300997‑M1/1‑72 (MQ=255)

                                                                           tACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaa                                                              >  1:485763‑M1/1‑62 (MQ=255)

                                                                            aCAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcctgatagtcttttgctatcgggaatattaacgacaactgacgaataaaa                                                             <  2:908354‑M1/140‑80 (MQ=255)

                                                                            aCAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaa                                                             <  2:330542‑M1/140‑80 (MQ=255)

                                                                            aCAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaa                                                             >  1:935019‑M1/1‑61 (MQ=255)

                                                                             cAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaat                                                            >  2:710367‑M1/1‑60 (MQ=255)

                                                                             cAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaat                                                            >  1:360426‑M1/1‑60 (MQ=255)

                                                                             cAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaat                                                            >  1:330778‑M1/1‑60 (MQ=255)

                                                                               aCGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataa                                                          >  1:397254‑M1/1‑58 (MQ=255)

                                                                                 gAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaa                                                        <  2:677568‑M1/140‑85 (MQ=255)

                                                                                 gAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaa                                                        <  2:779674‑M1/140‑85 (MQ=255)

                                                                                   aaaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaac                                                      >  2:948399‑M1/1‑54 (MQ=255)

                                                                                    aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaaca                                                     <  2:678933‑M1/140‑88 (MQ=255)

                                                                                    aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaaca                                                     <  1:604151‑M1/140‑88 (MQ=255)

                                                                                    aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaaca                                                     <  2:17843‑M1/140‑88 (MQ=255)

                                                                                    aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaaca                                                     <  2:587607‑M1/140‑88 (MQ=255)

                                                                                    aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaaca                                                     <  2:300997‑M1/140‑88 (MQ=255)

                                                                                    aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaaca                                                     <  2:485763‑M1/140‑88 (MQ=255)

                                                                                      tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacacc                                                   <  1:939526‑M1/140‑90 (MQ=255)

                                                                                      tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacacc                                                   <  1:710367‑M1/140‑90 (MQ=255)

                                                                                      tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacacc                                                   <  1:828652‑M1/140‑90 (MQ=255)

                                                                                      tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacacc                                                   <  2:330778‑M1/140‑90 (MQ=255)

                                                                                      tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacacc                                                   <  2:493915‑M1/140‑90 (MQ=255)

                                                                                      tAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacacc                                                   <  1:474818‑M1/140‑90 (MQ=255)

                                                                                               tCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacacc                                                   <  2:131245‑M1/131‑90 (MQ=255)

                                                                                               tCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacacc                                                   >  1:131245‑M1/1‑42 (MQ=255)

                                                                                                cacaCCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaaca                                                     >  1:437773‑M1/1‑41 (MQ=255)

                                                                                                cacaCCCCATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaaca                                                     <  2:437773‑M1/128‑88 (MQ=255)

                                                                                                     cccATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaagtaaaaacaccctgtataataggaaa                                    <  1:919134‑M1/140‑105 (MQ=255)

                                                                                                     cccATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaa                                    <  2:397254‑M1/140‑105 (MQ=255)

                                                                                                     cccATTTAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaa                                    <  2:941061‑M1/140‑105 (MQ=255)

                                                                                                          ttAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataatagga                                      >  2:176800‑M1/1‑31 (MQ=255)

                                                                                                          ttAATATCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataatagga                                      <  1:176800‑M1/133‑103 (MQ=255)

                                                                                                             atatCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattt                            >  1:535499‑M1/1‑28 (MQ=255)

                                                                                                               atCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttatttta                          >  2:195341‑M1/1‑26 (MQ=255)

                                                                                                               atCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaag                                   <  1:730799‑M1/131‑106 (MQ=255)

                                                                                                               atCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaag                                   >  2:730799‑M1/1‑26 (MQ=255)

                                                                                                               atCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcctttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttatttta                          <  1:787766‑M1/140‑115 (MQ=255)

                                                                                                                tCAGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttac                         <  2:544275‑M1/140‑116 (MQ=255)

                                                                                                                  aGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaa                                    <  1:75260‑M1/127‑105 (MQ=255)

                                                                                                                  aGGGAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaa                                    >  2:75260‑M1/1‑23 (MQ=255)

                                                                                                                   gggAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagg                      >  1:584935‑M1/1‑22 (MQ=255)

                                                                                                                   gggAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagct                                 >  2:102604‑M1/1‑22 (MQ=255)

                                                                                                                   gggAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagct                                 <  1:102604‑M1/129‑108 (MQ=255)

                                                                                                                     gAACCGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggt                    <  2:584935‑M1/140‑121 (MQ=255)

                                                                                                                        ccGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaa                 >  1:47189‑M1/1‑17 (MQ=255)

                                                                                                                        ccGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaa                 <  2:812920‑M1/140‑124 (MQ=255)

                                                                                                                        ccGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaa                 >  2:82286‑M1/1‑17 (MQ=255)

                                                                                                                        ccGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaa                 <  2:360426‑M1/140‑124 (MQ=255)

                                                                                                                        ccGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttatttta                          <  1:116979‑M1/131‑115 (MQ=255)

                                                                                                                        ccGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttatttta                          >  2:116979‑M1/1‑17 (MQ=255)

                                                                                                                         cGGACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaa                <  2:781795‑M1/140‑125 (MQ=255)

                                                                                                                           gACATAACCCCATGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaacc              >  1:407091‑M1/1‑14 (MQ=255)

                                                                                                                                      aTGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatgccatctac   >  2:407628‑M1/1‑3 (MQ=255)

                                                                                                                                       tGcgcttgaagagcctggtgtaataacaattcccgatagtcttttgctatcgggaatattaacgacaactgacgaataaaataaaaacaccctgtataataggaaagcttattttacagggtaaaaccatgccatctaca  <  2:859267‑M1/140‑139 (MQ=255)

ACCAGCATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATGGGTGATTTTTATGAACTGTTTTATGACGACGCAAAACGCGCG  >  NC_000913/2856959‑2857233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`