Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,426,070	G→T	intergenic (+90/‑384)	ydaY → / → ynaA	Rac prophage; putative uncharacterized protein YdaY/Rac prophage; putative prophage tail length tape measure domain‑containing protein YnaA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,426,070	0	G	T	100.0%	289.1 / NA	82	intergenic (+90/‑384)	ydaY/ynaA	Rac prophage; putative uncharacterized protein YdaY/Rac prophage; putative prophage tail length tape measure domain‑containing protein YnaA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (40/42);  total (40/42)

CCCAGGGTAAAGAGCAGCAGAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGGAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCAC  >  NC_000913/1425934‑1426203                                                                                                                                         |                                                                                                                                      cccAGGGTAAAGAGCAGCAGAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAAc                                                                                                                                    <  2:703740/140‑1 (MQ=255) cccAGGGTAAAGAGCAGCAGAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAAc                                                                                                                                    >  1:296565/1‑140 (MQ=255)      ggTAAAGAGCAGCAGAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGaa                                                                                                                               >  1:649322/1‑140 (MQ=255)      ggTAAAGAGCAGCAGAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGaa                                                                                                                               >  2:748451/1‑140 (MQ=255)      ggTAAAGAGCAGCAGAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGaa                                                                                                                               >  2:896997/1‑140 (MQ=255)      ggTAAAGAGCAGCAGAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGaa                                                                                                                               >  1:870023/1‑140 (MQ=255)      ggTAAAGAGCAGCAGAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGaa                                                                                                                               >  1:305656/1‑140 (MQ=255)         aaaGAGCAGCAGAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATa                                                                                                                            <  1:36498/140‑1 (MQ=255)           agagCAGCAGAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGa                                                                                                                          >  2:423867/1‑140 (MQ=255)            gagCAGCAGAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGAc                                                                                                                         <  2:1004809/140‑1 (MQ=255)                agcagAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCgg                                                                                                                     >  1:479076/1‑140 (MQ=255)                agcagAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCgg                                                                                                                     <  1:753748/140‑1 (MQ=255)                agcagAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCgg                                                                                                                     >  2:54033/1‑140 (MQ=255)                 gcagAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGt                                                                                                                    >  1:338998/1‑140 (MQ=255)                 gcagAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGt                                                                                                                    <  2:873779/140‑1 (MQ=255)                       gCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTaa                                                                                                              >  2:874386/1‑140 (MQ=255)                       gCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTaa                                                                                                              >  2:75803/1‑140 (MQ=255)                        cAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACACAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAg                                                                                                             <  1:349404/140‑1 (MQ=255)                          ggATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGa                                                                                                           >  1:266503/1‑140 (MQ=255)                           gATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAg                                                                                                          <  2:438401/140‑1 (MQ=255)                           gATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAg                                                                                                          <  1:896997/140‑1 (MQ=255)                           gATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAg                                                                                                          <  1:582703/140‑1 (MQ=255)                            aTACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAgt                                                                                                         <  2:146835/140‑1 (MQ=255)                                gATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAgttgtt                                                                                                     >  2:1000114/1‑140 (MQ=255)                                    aaaaaGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTAc                                                                                                 <  2:61222/140‑1 (MQ=255)                                     aaaaGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACg                                                                                                >  1:136326/1‑140 (MQ=255)                                     aaaaGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACg                                                                                                >  1:564125/1‑140 (MQ=255)                                     aaaaGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAA‑GGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGc                                                                                               >  1:21886/1‑140 (MQ=255)                                      aaaGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGTCCCGGTGCTTAAGGAGTTGTTGTACGc                                                                                               <  1:874386/140‑1 (MQ=255)                                      aaaGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGc                                                                                               <  2:542021/140‑1 (MQ=255)                                       aaGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGcc                                                                                              >  1:261979/1‑140 (MQ=255)                                          ccATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTAt                                                                                           >  2:163636/1‑140 (MQ=255)                                          ccATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTAt                                                                                           >  1:381374/1‑140 (MQ=255)                                           cATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATCCCGTAACCAGAAATAGCCCCGGTGCTTAAGGAGTTGTTGTACGCCTAtt                                                                                          <  1:423867/140‑1 (MQ=255)                                           cATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTAtt                                                                                          <  2:136326/140‑1 (MQ=255)                                           cATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTAtt                                                                                          <  2:338998/140‑1 (MQ=255)                                           cATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTAtt                                                                                          <  1:938857/140‑1 (MQ=255)                                             tAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCg                                                                                        <  1:794984/140‑1 (MQ=255)                                             tAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCg                                                                                        <  1:714087/140‑1 (MQ=255)                                                 tGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTaa                                                                                    >  1:178276/1‑140 (MQ=255)                                                   cccAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGc                                                                                               <  1:226105/127‑1 (MQ=255)                                                   cccAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGc                                                                                               >  2:226105/1‑127 (MQ=255)                                                   cccAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAata                                                                                  >  2:329806/1‑140 (MQ=255)                                                   cccAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAata                                                                                  >  1:620431/1‑140 (MQ=255)                                                   cccAGCGGTGGTTATCGGAGATCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAata                                                                                  >  1:404815/1‑140 (MQ=255)                                                       gCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATccc                                                                              <  1:566634/140‑1 (MQ=255)                                                            ggtTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGcc                                                                         <  1:75803/140‑1 (MQ=255)                                                            ggtTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGcc                                                                         <  2:261979/140‑1 (MQ=255)                                                             gtTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGccc                                                                        >  2:997506/1‑140 (MQ=255)                                                             gtTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGccc                                                                        >  2:19421/1‑140 (MQ=255)                                                             gtTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGccc                                                                        <  2:381374/140‑1 (MQ=255)                                                                 tCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACg                                                                    <  1:163636/140‑1 (MQ=255)                                                                 tCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACg                                                                    <  2:9038/140‑1 (MQ=255)                                                                 tCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACg                                                                    <  1:19421/140‑1 (MQ=255)                                                                  cGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGt                                                                   <  1:891605/140‑1 (MQ=255)                                                                     aGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTAt                                                                <  1:664659/140‑1 (MQ=255)                                                                     aGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTAt                                                                >  1:709408/1‑140 (MQ=255)                                                                          gggggAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTgg                                                           <  2:710825/140‑1 (MQ=255)                                                                            gggAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGaa                                                         >  2:731335/1‑140 (MQ=255)                                                                                 aaaGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCt                                                    >  2:28566/1‑140 (MQ=255)                                                                                    ggggggAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTggg                                                 <  1:997506/140‑1 (MQ=255)                                                                                    ggggggAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTggg                                                 <  1:54033/140‑1 (MQ=255)                                                                                        ggAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGT‑‑GCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGtgcct                                           <  2:251196/140‑1 (MQ=255)                                                                                        ggAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGT‑‑GCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGtgcct                                           >  1:251196/1‑140 (MQ=255)                                                                                          aaaaGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGtgcct                                           <  2:21886/140‑1 (MQ=255)                                                                                          aaaaGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGtgcct                                           <  1:948305/140‑1 (MQ=255)                                                                                              ggCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGtgcctttgc                                       >  1:720424/1‑140 (MQ=255)                                                                                              ggCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGtgcctttgc                                       >  2:851239/1‑140 (MQ=255)                                                                                               gCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGtgcctttgcc                                      >  2:608185/1‑140 (MQ=255)                                                                                               gCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGtgcctttgcc                                      >  2:778957/1‑140 (MQ=255)                                                                                                cAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGtgcctttgcct                                     >  2:47478/1‑140 (MQ=255)                                                                                                 aaGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGtgcctttgcctt                                    <  1:748451/140‑1 (MQ=255)                                                                                                        aaGCGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATctct                             >  2:421083/1‑140 (MQ=255)                                                                                                           cGAGAAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGAc                          <  1:488888/140‑1 (MQ=255)                                                                                                             agaAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACag                        >  2:70319/1‑140 (MQ=255)                                                                                                              gaAAAACTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACaga                       <  2:649322/140‑1 (MQ=255)                                                                                                               aaaaaCTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACagag                      >  2:663498/1‑140 (MQ=255)                                                                                                                aaaaCTCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAgaga                     <  2:620431/140‑1 (MQ=255)                                                                                                                     tCAGGTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAAt                <  1:851239/140‑1 (MQ=255)                                                                                                                         gTTGCCACCGATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAat            >  2:800404/1‑140 (MQ=255)                                                                                                                                  gATACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCa   <  1:663498/140‑1 (MQ=255)                                                                                                                                   aTACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCAc  <  2:870023/140‑1 (MQ=255)                                                                                                                                   aTACCGTAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCAc  >  1:218255/1‑140 (MQ=255)                                                                                                                                         |                                                                                                                                      CCCAGGGTAAAGAGCAGCAGAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGGAACCAGAAATAGACCCGGTGCTTAAGGAGTTGTTGTACGCCTATTCGGTAATATCCCGTGCCCGACGTTATGCTGGAATGGCTGGGGTGCCTTTGCCTTTATCTCTGACAGAGATAAATGAATATTTAGCCAC  >  NC_000913/1425934‑1426203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑